data_7U8E
#
_model_server_result.job_id            z26Zu104zCxDLRxXsDdEKw 
_model_server_result.datetime_utc      '2024-11-21 08:58:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u8e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":303}' 
#
_entry.id    7U8E 
#
_exptl.entry_id    7U8E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.03 
_cell.angle_gamma         90 
_cell.entry_id            7U8E 
_cell.length_a            194.797 
_cell.length_b            41.603 
_cell.length_c            98.991 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U8E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,C,G,H,I,J,K,M,N 1 1 
A,D,E,F,L 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -97.3985 20.8015 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
? 5 H N N 
? 5 I N N 
? 5 J N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 336 1_555 A SG CYS 31 A CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 49 A CYS 379 1_555 A SG CYS 102 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 A SG CYS 61 A CYS 391 1_555 A SG CYS 195 A CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf4 A SG CYS 150 A CYS 480 1_555 A SG CYS 158 A CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf5 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
disulf ? disulf6 B SG CYS 103 H CYS 100 1_555 B SG CYS 108 H CYS 100 1_555 ? ? ? E ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf7 B SG CYS 154 H CYS 140 1_555 B SG CYS 210 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf8 C SG CYS 22 L CYS 23 1_555 C SG CYS 96 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf9 C SG CYS 143 L CYS 137 1_555 C SG CYS 202 L CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
covale ? covale1 A ND2 ASN 13 A ASN 343 1_555 D C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7U8E 
_atom_sites.fract_transf_matrix[1][1]    0.005134 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001572 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024037 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010565 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG A 1 601 602 NAG NAG . 
E 5 GOL A 1 602 701 GOL GOL . 
F 5 GOL A 1 603 801 GOL GOL . 
G 6 CL H 1 301 1 CL CL . 
H 5 GOL H 1 302 287 GOL GOL . 
I 5 GOL H 1 303 301 GOL GOL . 
J 5 GOL L 1 301 303 GOL GOL . 
K 5 GOL L 1 302 309 GOL GOL . 
L 7 HOH A 1 701 213 HOH HOH . 
L 7 HOH A 2 702 109 HOH HOH . 
L 7 HOH A 3 703 229 HOH HOH . 
L 7 HOH A 4 704 217 HOH HOH . 
L 7 HOH A 5 705 144 HOH HOH . 
L 7 HOH A 6 706 107 HOH HOH . 
L 7 HOH A 7 707 24 HOH HOH . 
L 7 HOH A 8 708 74 HOH HOH . 
L 7 HOH A 9 709 65 HOH HOH . 
L 7 HOH A 10 710 151 HOH HOH . 
L 7 HOH A 11 711 101 HOH HOH . 
L 7 HOH A 12 712 98 HOH HOH . 
L 7 HOH A 13 713 80 HOH HOH . 
L 7 HOH A 14 714 7 HOH HOH . 
L 7 HOH A 15 715 154 HOH HOH . 
L 7 HOH A 16 716 104 HOH HOH . 
L 7 HOH A 17 717 38 HOH HOH . 
L 7 HOH A 18 718 114 HOH HOH . 
L 7 HOH A 19 719 50 HOH HOH . 
L 7 HOH A 20 720 111 HOH HOH . 
L 7 HOH A 21 721 190 HOH HOH . 
L 7 HOH A 22 722 64 HOH HOH . 
L 7 HOH A 23 723 149 HOH HOH . 
L 7 HOH A 24 724 214 HOH HOH . 
L 7 HOH A 25 725 163 HOH HOH . 
L 7 HOH A 26 726 185 HOH HOH . 
L 7 HOH A 27 727 198 HOH HOH . 
L 7 HOH A 28 728 150 HOH HOH . 
M 7 HOH H 1 401 105 HOH HOH . 
M 7 HOH H 2 402 36 HOH HOH . 
M 7 HOH H 3 403 195 HOH HOH . 
M 7 HOH H 4 404 39 HOH HOH . 
M 7 HOH H 5 405 117 HOH HOH . 
M 7 HOH H 6 406 110 HOH HOH . 
M 7 HOH H 7 407 71 HOH HOH . 
M 7 HOH H 8 408 55 HOH HOH . 
M 7 HOH H 9 409 116 HOH HOH . 
M 7 HOH H 10 410 66 HOH HOH . 
M 7 HOH H 11 411 212 HOH HOH . 
M 7 HOH H 12 412 223 HOH HOH . 
M 7 HOH H 13 413 147 HOH HOH . 
M 7 HOH H 14 414 75 HOH HOH . 
M 7 HOH H 15 415 79 HOH HOH . 
M 7 HOH H 16 416 129 HOH HOH . 
M 7 HOH H 17 417 61 HOH HOH . 
M 7 HOH H 18 418 10 HOH HOH . 
M 7 HOH H 19 419 207 HOH HOH . 
M 7 HOH H 20 420 123 HOH HOH . 
M 7 HOH H 21 421 8 HOH HOH . 
M 7 HOH H 22 422 90 HOH HOH . 
M 7 HOH H 23 423 77 HOH HOH . 
M 7 HOH H 24 424 4 HOH HOH . 
M 7 HOH H 25 425 121 HOH HOH . 
M 7 HOH H 26 426 226 HOH HOH . 
M 7 HOH H 27 427 53 HOH HOH . 
M 7 HOH H 28 428 2 HOH HOH . 
M 7 HOH H 29 429 45 HOH HOH . 
M 7 HOH H 30 430 76 HOH HOH . 
M 7 HOH H 31 431 23 HOH HOH . 
M 7 HOH H 32 432 216 HOH HOH . 
M 7 HOH H 33 433 62 HOH HOH . 
M 7 HOH H 34 434 81 HOH HOH . 
M 7 HOH H 35 435 57 HOH HOH . 
M 7 HOH H 36 436 97 HOH HOH . 
M 7 HOH H 37 437 59 HOH HOH . 
M 7 HOH H 38 438 183 HOH HOH . 
M 7 HOH H 39 439 168 HOH HOH . 
M 7 HOH H 40 440 68 HOH HOH . 
M 7 HOH H 41 441 228 HOH HOH . 
M 7 HOH H 42 442 95 HOH HOH . 
M 7 HOH H 43 443 215 HOH HOH . 
M 7 HOH H 44 444 63 HOH HOH . 
M 7 HOH H 45 445 49 HOH HOH . 
M 7 HOH H 46 446 166 HOH HOH . 
M 7 HOH H 47 447 54 HOH HOH . 
M 7 HOH H 48 448 158 HOH HOH . 
M 7 HOH H 49 449 16 HOH HOH . 
M 7 HOH H 50 450 165 HOH HOH . 
M 7 HOH H 51 451 108 HOH HOH . 
M 7 HOH H 52 452 125 HOH HOH . 
M 7 HOH H 53 453 19 HOH HOH . 
M 7 HOH H 54 454 139 HOH HOH . 
M 7 HOH H 55 455 86 HOH HOH . 
M 7 HOH H 56 456 224 HOH HOH . 
M 7 HOH H 57 457 25 HOH HOH . 
M 7 HOH H 58 458 138 HOH HOH . 
M 7 HOH H 59 459 96 HOH HOH . 
M 7 HOH H 60 460 140 HOH HOH . 
M 7 HOH H 61 461 225 HOH HOH . 
M 7 HOH H 62 462 112 HOH HOH . 
M 7 HOH H 63 463 143 HOH HOH . 
M 7 HOH H 64 464 177 HOH HOH . 
M 7 HOH H 65 465 211 HOH HOH . 
M 7 HOH H 66 466 44 HOH HOH . 
M 7 HOH H 67 467 78 HOH HOH . 
M 7 HOH H 68 468 30 HOH HOH . 
M 7 HOH H 69 469 87 HOH HOH . 
M 7 HOH H 70 470 124 HOH HOH . 
M 7 HOH H 71 471 218 HOH HOH . 
M 7 HOH H 72 472 175 HOH HOH . 
M 7 HOH H 73 473 52 HOH HOH . 
M 7 HOH H 74 474 157 HOH HOH . 
M 7 HOH H 75 475 43 HOH HOH . 
M 7 HOH H 76 476 82 HOH HOH . 
M 7 HOH H 77 477 153 HOH HOH . 
M 7 HOH H 78 478 120 HOH HOH . 
M 7 HOH H 79 479 14 HOH HOH . 
M 7 HOH H 80 480 227 HOH HOH . 
M 7 HOH H 81 481 141 HOH HOH . 
M 7 HOH H 82 482 91 HOH HOH . 
M 7 HOH H 83 483 148 HOH HOH . 
M 7 HOH H 84 484 180 HOH HOH . 
M 7 HOH H 85 485 191 HOH HOH . 
M 7 HOH H 86 486 189 HOH HOH . 
M 7 HOH H 87 487 202 HOH HOH . 
M 7 HOH H 88 488 193 HOH HOH . 
M 7 HOH H 89 489 170 HOH HOH . 
M 7 HOH H 90 490 178 HOH HOH . 
M 7 HOH H 91 491 169 HOH HOH . 
N 7 HOH L 1 401 51 HOH HOH . 
N 7 HOH L 2 402 58 HOH HOH . 
N 7 HOH L 3 403 100 HOH HOH . 
N 7 HOH L 4 404 221 HOH HOH . 
N 7 HOH L 5 405 13 HOH HOH . 
N 7 HOH L 6 406 206 HOH HOH . 
N 7 HOH L 7 407 15 HOH HOH . 
N 7 HOH L 8 408 113 HOH HOH . 
N 7 HOH L 9 409 67 HOH HOH . 
N 7 HOH L 10 410 3 HOH HOH . 
N 7 HOH L 11 411 88 HOH HOH . 
N 7 HOH L 12 412 171 HOH HOH . 
N 7 HOH L 13 413 132 HOH HOH . 
N 7 HOH L 14 414 73 HOH HOH . 
N 7 HOH L 15 415 18 HOH HOH . 
N 7 HOH L 16 416 220 HOH HOH . 
N 7 HOH L 17 417 92 HOH HOH . 
N 7 HOH L 18 418 11 HOH HOH . 
N 7 HOH L 19 419 85 HOH HOH . 
N 7 HOH L 20 420 29 HOH HOH . 
N 7 HOH L 21 421 70 HOH HOH . 
N 7 HOH L 22 422 179 HOH HOH . 
N 7 HOH L 23 423 17 HOH HOH . 
N 7 HOH L 24 424 162 HOH HOH . 
N 7 HOH L 25 425 167 HOH HOH . 
N 7 HOH L 26 426 142 HOH HOH . 
N 7 HOH L 27 427 222 HOH HOH . 
N 7 HOH L 28 428 126 HOH HOH . 
N 7 HOH L 29 429 22 HOH HOH . 
N 7 HOH L 30 430 41 HOH HOH . 
N 7 HOH L 31 431 12 HOH HOH . 
N 7 HOH L 32 432 164 HOH HOH . 
N 7 HOH L 33 433 20 HOH HOH . 
N 7 HOH L 34 434 31 HOH HOH . 
N 7 HOH L 35 435 93 HOH HOH . 
N 7 HOH L 36 436 32 HOH HOH . 
N 7 HOH L 37 437 84 HOH HOH . 
N 7 HOH L 38 438 34 HOH HOH . 
N 7 HOH L 39 439 56 HOH HOH . 
N 7 HOH L 40 440 152 HOH HOH . 
N 7 HOH L 41 441 122 HOH HOH . 
N 7 HOH L 42 442 118 HOH HOH . 
N 7 HOH L 43 443 103 HOH HOH . 
N 7 HOH L 44 444 115 HOH HOH . 
N 7 HOH L 45 445 37 HOH HOH . 
N 7 HOH L 46 446 89 HOH HOH . 
N 7 HOH L 47 447 21 HOH HOH . 
N 7 HOH L 48 448 99 HOH HOH . 
N 7 HOH L 49 449 119 HOH HOH . 
N 7 HOH L 50 450 182 HOH HOH . 
N 7 HOH L 51 451 94 HOH HOH . 
N 7 HOH L 52 452 186 HOH HOH . 
N 7 HOH L 53 453 176 HOH HOH . 
N 7 HOH L 54 454 102 HOH HOH . 
N 7 HOH L 55 455 161 HOH HOH . 
N 7 HOH L 56 456 47 HOH HOH . 
N 7 HOH L 57 457 106 HOH HOH . 
N 7 HOH L 58 458 160 HOH HOH . 
N 7 HOH L 59 459 136 HOH HOH . 
N 7 HOH L 60 460 134 HOH HOH . 
N 7 HOH L 61 461 83 HOH HOH . 
N 7 HOH L 62 462 146 HOH HOH . 
N 7 HOH L 63 463 46 HOH HOH . 
N 7 HOH L 64 464 60 HOH HOH . 
N 7 HOH L 65 465 194 HOH HOH . 
N 7 HOH L 66 466 192 HOH HOH . 
N 7 HOH L 67 467 27 HOH HOH . 
N 7 HOH L 68 468 72 HOH HOH . 
N 7 HOH L 69 469 35 HOH HOH . 
N 7 HOH L 70 470 205 HOH HOH . 
N 7 HOH L 71 471 181 HOH HOH . 
N 7 HOH L 72 472 156 HOH HOH . 
N 7 HOH L 73 473 219 HOH HOH . 
N 7 HOH L 74 474 159 HOH HOH . 
N 7 HOH L 75 475 131 HOH HOH . 
N 7 HOH L 76 476 42 HOH HOH . 
N 7 HOH L 77 477 9 HOH HOH . 
N 7 HOH L 78 478 6 HOH HOH . 
N 7 HOH L 79 479 173 HOH HOH . 
N 7 HOH L 80 480 204 HOH HOH . 
N 7 HOH L 81 481 184 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 5 -60.675 9.263 5.679 1 62.49 ? C1 GOL 303 H 1 
HETATM 2 O O1 GOL . . . I 5 -59.938 8.246 5.005 1 59.19 ? O1 GOL 303 H 1 
HETATM 3 C C2 GOL . . . I 5 -59.813 10.473 5.973 1 66.92 ? C2 GOL 303 H 1 
HETATM 4 O O2 GOL . . . I 5 -58.836 10.644 4.948 1 63.61 ? O2 GOL 303 H 1 
HETATM 5 C C3 GOL . . . I 5 -60.607 11.748 6.159 1 75.88 ? C3 GOL 303 H 1 
HETATM 6 O O3 GOL . . . I 5 -61.175 11.827 7.463 1 87.28 ? O3 GOL 303 H 1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#