data_7U8G # _model_server_result.job_id haiEl9zb3VZ8d4l3wMjvTA _model_server_result.datetime_utc '2024-11-04 22:45:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u8g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7U8G # _exptl.entry_id 7U8G _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U8G _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U8G _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 538 A CYS 244 1_555 A SG CYS 551 A CYS 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 C SG CYS 21 D CYS 21 1_555 C SG CYS 95 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 C SG CYS 35 D CYS 35 1_555 C SG CYS 50 D CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 D SG CYS 23 E CYS 23 1_555 D SG CYS 88 E CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A ND2 ASN 426 A ASN 132 1_555 I C1 NAG . A NAG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale2 A ND2 ASN 443 A ASN 149 1_555 H C1 NAG . A NAG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 A ND2 ASN 534 A ASN 240 1_555 G C1 NAG . A NAG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? metalc ? metalc1 A NE2 HIS 395 A HIS 101 1_555 J FE HEM . A HEM 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A NE2 HIS 409 A HIS 115 1_555 K FE HEM . A HEM 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc3 A NE2 HIS 503 A HIS 209 1_555 J FE HEM . A HEM 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc4 A NE2 HIS 516 A HIS 222 1_555 K FE HEM . A HEM 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C12 POV sing 370 n n N C13 POV sing 371 n n N C14 POV sing 372 n n N C15 POV sing 373 n n P O11 POV sing 374 n n P O12 POV sing 375 n n P O13 POV sing 376 n n P O14 POV doub 377 n n C1 C2 POV sing 378 n n C1 O11 POV sing 379 n n C1 H1 POV sing 380 n n C1 H1A POV sing 381 n n C2 C3 POV sing 382 n n C2 O21 POV sing 383 n n C2 H2 POV sing 384 n n C3 O31 POV sing 385 n n C3 H3 POV sing 386 n n C3 H3A POV sing 387 n n C210 C211 POV sing 388 n n C210 C29 POV doub 389 z n C210 H210 POV sing 390 n n C310 C311 POV sing 391 n n C310 C39 POV sing 392 n n C310 H310 POV sing 393 n n C310 H31A POV sing 394 n n C11 C12 POV sing 395 n n C11 O12 POV sing 396 n n C11 H11 POV sing 397 n n C11 H11A POV sing 398 n n C211 C212 POV sing 399 n n C211 H211 POV sing 400 n n C211 H21A POV sing 401 n n C311 C312 POV sing 402 n n C311 H311 POV sing 403 n n C311 H31B POV sing 404 n n C12 H12 POV sing 405 n n C12 H12A POV sing 406 n n C212 C213 POV sing 407 n n C212 H212 POV sing 408 n n C212 H21B POV sing 409 n n C312 C313 POV sing 410 n n C312 H312 POV sing 411 n n C312 H31C POV sing 412 n n C13 H13 POV sing 413 n n C13 H13A POV sing 414 n n C13 H13B POV sing 415 n n C213 C214 POV sing 416 n n C213 H213 POV sing 417 n n C213 H21C POV sing 418 n n C313 C314 POV sing 419 n n C313 H313 POV sing 420 n n C313 H31D POV sing 421 n n C14 H14 POV sing 422 n n C14 H14A POV sing 423 n n C14 H14B POV sing 424 n n C214 C215 POV sing 425 n n C214 H214 POV sing 426 n n C214 H21D POV sing 427 n n C314 C315 POV sing 428 n n C314 H314 POV sing 429 n n C314 H31E POV sing 430 n n C15 H15 POV sing 431 n n C15 H15A POV sing 432 n n C15 H15B POV sing 433 n n C215 C216 POV sing 434 n n C215 H215 POV sing 435 n n C215 H21E POV sing 436 n n C315 C316 POV sing 437 n n C315 H315 POV sing 438 n n C315 H31F POV sing 439 n n C216 C217 POV sing 440 n n C216 H216 POV sing 441 n n C216 H21F POV sing 442 n n C316 H316 POV sing 443 n n C316 H31G POV sing 444 n n C316 H31H POV sing 445 n n C217 C218 POV sing 446 n n C217 H217 POV sing 447 n n C217 H21G POV sing 448 n n C218 H218 POV sing 449 n n C218 H21H POV sing 450 n n C218 H21J POV sing 451 n n C21 O21 POV sing 452 n n C21 C22 POV sing 453 n n C21 O22 POV doub 454 n n C22 C23 POV sing 455 n n C22 H22 POV sing 456 n n C22 H22A POV sing 457 n n C23 C24 POV sing 458 n n C23 H23 POV sing 459 n n C23 H23A POV sing 460 n n C24 C25 POV sing 461 n n C24 H24 POV sing 462 n n C24 H24A POV sing 463 n n C25 C26 POV sing 464 n n C25 H25 POV sing 465 n n C25 H25A POV sing 466 n n C26 C27 POV sing 467 n n C26 H26 POV sing 468 n n C26 H26A POV sing 469 n n C27 C28 POV sing 470 n n C27 H27 POV sing 471 n n C27 H27A POV sing 472 n n C28 C29 POV sing 473 n n C28 H28 POV sing 474 n n C28 H28A POV sing 475 n n C29 H29 POV sing 476 n n C31 O31 POV sing 477 n n C31 C32 POV sing 478 n n C31 O32 POV doub 479 n n C32 C33 POV sing 480 n n C32 H32 POV sing 481 n n C32 H32A POV sing 482 n n C33 C34 POV sing 483 n n C33 H33 POV sing 484 n n C33 H33A POV sing 485 n n C34 C35 POV sing 486 n n C34 H34 POV sing 487 n n C34 H34A POV sing 488 n n C35 C36 POV sing 489 n n C35 H35 POV sing 490 n n C35 H35A POV sing 491 n n C36 C37 POV sing 492 n n C36 H36 POV sing 493 n n C36 H36A POV sing 494 n n C37 C38 POV sing 495 n n C37 H37 POV sing 496 n n C37 H37A POV sing 497 n n C38 C39 POV sing 498 n n C38 H38 POV sing 499 n n C38 H38A POV sing 500 n n C39 H39 POV sing 501 n n C39 H39A POV sing 502 n n # _atom_sites.entry_id 7U8G _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 POV A 1 601 5 POV POV . F 5 POV A 1 602 8 POV POV . G 6 NAG A 1 603 9 NAG NAG . H 6 NAG A 1 604 10 NAG NAG . I 6 NAG A 1 605 11 NAG NAG . J 7 HEM A 1 606 1605 HEM HEM . K 7 HEM A 1 607 1606 HEM HEM . L 5 POV B 1 201 6 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . E 5 134.519 134.505 126.781 1 25.05 ? N POV 601 A 1 HETATM 2 P P POV . . . E 5 131.225 136.176 129.5 1 25.05 ? P POV 601 A 1 HETATM 3 C C1 POV . . . E 5 130.94 134.797 131.766 1 25.05 ? C1 POV 601 A 1 HETATM 4 C C2 POV . . . E 5 130.734 135.788 132.92 1 25.05 ? C2 POV 601 A 1 HETATM 5 C C3 POV . . . E 5 132.087 136.21 133.51 1 25.05 ? C3 POV 601 A 1 HETATM 6 C C310 POV . . . E 5 131.58 135.129 146.439 1 25.05 ? C310 POV 601 A 1 HETATM 7 C C11 POV . . . E 5 132.095 134.526 127.622 1 25.05 ? C11 POV 601 A 1 HETATM 8 O O11 POV . . . E 5 130.32 135.286 130.587 1 25.05 ? O11 POV 601 A 1 HETATM 9 C C311 POV . . . E 5 132.266 135.722 147.704 1 25.05 ? C311 POV 601 A 1 HETATM 10 C C12 POV . . . E 5 133.312 133.693 127.095 1 25.05 ? C12 POV 601 A 1 HETATM 11 O O12 POV . . . E 5 132.417 135.245 128.8 1 25.05 ? O12 POV 601 A 1 HETATM 12 C C312 POV . . . E 5 132.224 134.671 148.855 1 25.05 ? C312 POV 601 A 1 HETATM 13 C C13 POV . . . E 5 135.458 133.666 126.019 1 25.05 ? C13 POV 601 A 1 HETATM 14 O O13 POV . . . E 5 131.778 137.371 130.133 1 25.05 ? O13 POV 601 A 1 HETATM 15 C C14 POV . . . E 5 134.176 135.691 125.965 1 25.05 ? C14 POV 601 A 1 HETATM 16 O O14 POV . . . E 5 130.376 136.781 128.478 1 25.05 ? O14 POV 601 A 1 HETATM 17 C C15 POV . . . E 5 135.203 134.933 128.017 1 25.05 ? C15 POV 601 A 1 HETATM 18 C C31 POV . . . E 5 133.055 135.686 135.629 1 25.05 ? C31 POV 601 A 1 HETATM 19 O O31 POV . . . E 5 132.575 135.196 134.382 1 25.05 ? O31 POV 601 A 1 HETATM 20 C C32 POV . . . E 5 132.463 135.133 136.955 1 25.05 ? C32 POV 601 A 1 HETATM 21 O O32 POV . . . E 5 133.909 136.51 135.659 1 25.05 ? O32 POV 601 A 1 HETATM 22 C C33 POV . . . E 5 132.993 135.943 138.175 1 25.05 ? C33 POV 601 A 1 HETATM 23 C C34 POV . . . E 5 132.119 135.569 139.413 1 25.05 ? C34 POV 601 A 1 HETATM 24 C C35 POV . . . E 5 132.641 136.272 140.702 1 25.05 ? C35 POV 601 A 1 HETATM 25 C C36 POV . . . E 5 132.587 136.127 142.253 1 25.05 ? C36 POV 601 A 1 HETATM 26 C C37 POV . . . E 5 131.151 136.434 142.764 1 25.05 ? C37 POV 601 A 1 HETATM 27 C C38 POV . . . E 5 130.859 135.604 144.053 1 25.05 ? C38 POV 601 A 1 HETATM 28 C C39 POV . . . E 5 131.706 136.13 145.248 1 25.05 ? C39 POV 601 A 1 HETATM 29 H H1 POV . . . E 5 130.493 133.839 132.034 1 25.05 ? H1 POV 601 A 1 HETATM 30 H H1A POV . . . E 5 132.003 134.659 131.583 1 25.05 ? H1A POV 601 A 1 HETATM 31 H H2 POV . . . E 5 130.208 136.668 132.553 1 25.05 ? H2 POV 601 A 1 HETATM 32 H H3 POV . . . E 5 131.964 137.136 134.072 1 25.05 ? H3 POV 601 A 1 HETATM 33 H H3A POV . . . E 5 132.804 136.375 132.705 1 25.05 ? H3A POV 601 A 1 HETATM 34 H H310 POV . . . E 5 132.063 134.187 146.174 1 25.05 ? H310 POV 601 A 1 HETATM 35 H H31A POV . . . E 5 130.525 134.948 146.651 1 25.05 ? H31A POV 601 A 1 HETATM 36 H H11 POV . . . E 5 131.765 135.225 126.853 1 25.05 ? H11 POV 601 A 1 HETATM 37 H H11A POV . . . E 5 131.275 133.841 127.845 1 25.05 ? H11A POV 601 A 1 HETATM 38 H H311 POV . . . E 5 133.304 135.969 147.474 1 25.05 ? H311 POV 601 A 1 HETATM 39 H H31B POV . . . E 5 131.738 136.623 148.016 1 25.05 ? H31B POV 601 A 1 HETATM 40 H H12 POV . . . E 5 133 133.169 126.189 1 25.05 ? H12 POV 601 A 1 HETATM 41 H H12A POV . . . E 5 133.574 132.953 127.848 1 25.05 ? H12A POV 601 A 1 HETATM 42 H H32 POV . . . E 5 131.378 135.205 136.921 1 25.05 ? H32 POV 601 A 1 HETATM 43 H H312 POV . . . E 5 131.195 134.343 149.012 1 25.05 ? H312 POV 601 A 1 HETATM 44 H H32A POV . . . E 5 132.749 134.088 137.068 1 25.05 ? H32A POV 601 A 1 HETATM 45 H H31C POV . . . E 5 132.842 133.814 148.587 1 25.05 ? H31C POV 601 A 1 HETATM 46 H H13 POV . . . E 5 134.968 133.289 125.124 1 25.05 ? H13 POV 601 A 1 HETATM 47 H H13A POV . . . E 5 136.328 134.254 125.734 1 25.05 ? H13A POV 601 A 1 HETATM 48 H H13B POV . . . E 5 135.777 132.826 126.638 1 25.05 ? H13B POV 601 A 1 HETATM 49 H H33 POV . . . E 5 134.032 135.682 138.365 1 25.05 ? H33 POV 601 A 1 HETATM 50 H H33A POV . . . E 5 132.913 137.007 137.976 1 25.05 ? H33A POV 601 A 1 HETATM 51 H H14 POV . . . E 5 133.5 135.396 125.163 1 25.05 ? H14 POV 601 A 1 HETATM 52 H H14A POV . . . E 5 133.694 136.443 126.588 1 25.05 ? H14A POV 601 A 1 HETATM 53 H H14B POV . . . E 5 135.086 136.112 125.533 1 25.05 ? H14B POV 601 A 1 HETATM 54 H H34 POV . . . E 5 131.086 135.879 139.229 1 25.05 ? H34 POV 601 A 1 HETATM 55 H H34A POV . . . E 5 132.148 134.489 139.558 1 25.05 ? H34A POV 601 A 1 HETATM 56 H H15 POV . . . E 5 136.203 135.29 127.771 1 25.05 ? H15 POV 601 A 1 HETATM 57 H H15A POV . . . E 5 134.645 135.738 128.491 1 25.05 ? H15A POV 601 A 1 HETATM 58 H H15B POV . . . E 5 135.277 134.09 128.701 1 25.05 ? H15B POV 601 A 1 HETATM 59 H H35 POV . . . E 5 133.684 135.98 140.591 1 25.05 ? H35 POV 601 A 1 HETATM 60 H H35A POV . . . E 5 131.984 137.137 140.641 1 25.05 ? H35A POV 601 A 1 HETATM 61 H H36 POV . . . E 5 132.862 135.109 142.53 1 25.05 ? H36 POV 601 A 1 HETATM 62 H H36A POV . . . E 5 133.289 136.828 142.706 1 25.05 ? H36A POV 601 A 1 HETATM 63 H H37 POV . . . E 5 131.068 137.495 142.991 1 25.05 ? H37 POV 601 A 1 HETATM 64 H H37A POV . . . E 5 130.428 136.171 141.994 1 25.05 ? H37A POV 601 A 1 HETATM 65 H H38 POV . . . E 5 129.799 135.686 144.3 1 25.05 ? H38 POV 601 A 1 HETATM 66 H H38A POV . . . E 5 131.106 134.558 143.873 1 25.05 ? H38A POV 601 A 1 HETATM 67 H H39 POV . . . E 5 131.336 137.108 145.554 1 25.05 ? H39 POV 601 A 1 HETATM 68 H H39A POV . . . E 5 132.752 136.212 144.952 1 25.05 ? H39A POV 601 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 68 #