data_7U9T # _model_server_result.job_id 6w27-6qG8sSaoui71gxEdw _model_server_result.datetime_utc '2024-11-16 16:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":5001}' # _entry.id 7U9T # _exptl.entry_id 7U9T _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U9T _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 M N N ? 4 P N N ? 4 S N N ? 4 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 4806 A CYS 4806 1_555 B SG CYS 4812 A CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 G SG CYS 4806 D CYS 4806 1_555 G SG CYS 4812 D CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 H SG CYS 4806 B CYS 4806 1_555 H SG CYS 4812 B CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 I SG CYS 4806 C CYS 4806 1_555 I SG CYS 4812 C CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 B SG CYS 4888 A CYS 4888 1_555 M ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 B SG CYS 4891 A CYS 4891 1_555 M ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc3 B NE2 HIS 4908 A HIS 4908 1_555 M ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc4 B ND1 HIS 4913 A HIS 4913 1_555 M ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc5 G SG CYS 4888 D CYS 4888 1_555 P ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 G SG CYS 4891 D CYS 4891 1_555 P ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc7 G NE2 HIS 4908 D HIS 4908 1_555 P ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc8 G ND1 HIS 4913 D HIS 4913 1_555 P ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc9 H SG CYS 4888 B CYS 4888 1_555 S ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc10 H SG CYS 4891 B CYS 4891 1_555 S ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc11 H NE2 HIS 4908 B HIS 4908 1_555 S ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc12 H ND1 HIS 4913 B HIS 4913 1_555 S ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc13 I SG CYS 4888 C CYS 4888 1_555 V ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc14 I SG CYS 4891 C CYS 4891 1_555 V ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc15 I NE2 HIS 4908 C HIS 4908 1_555 V ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc16 I ND1 HIS 4913 C HIS 4913 1_555 V ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7U9T _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 ZN A 1 5001 5001 ZN ZN . N 5 ATP A 1 5002 5002 ATP ATP . O 5 ATP A 1 5003 5005 ATP ATP . P 4 ZN D 1 5001 5001 ZN ZN . Q 5 ATP D 1 5002 5002 ATP ATP . R 5 ATP D 1 5003 5005 ATP ATP . S 4 ZN B 1 5001 5001 ZN ZN . T 5 ATP B 1 5002 5002 ATP ATP . U 5 ATP B 1 5003 5005 ATP ATP . V 4 ZN C 1 5001 5001 ZN ZN . W 5 ATP C 1 5002 5002 ATP ATP . X 5 ATP C 1 5003 5005 ATP ATP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 4 _atom_site.Cartn_x 204.454 _atom_site.Cartn_y 229.276 _atom_site.Cartn_z 242.986 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 83.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 5001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 95 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 829 _model_server_stats.query_time_ms 445 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #