data_7U9U
#
_model_server_result.job_id            GUk5b2v1Yvjtm-67YTQGlg 
_model_server_result.datetime_utc      '2024-11-28 10:29:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u9u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":402}' 
#
_entry.id    7U9U 
#
_exptl.entry_id    7U9U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              287.294 
_entity.id                          4 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            (3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U9U 
_cell.length_a            122.806 
_cell.length_b            73.403 
_cell.length_c            79.799 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U9U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1,2 
B,E,F,H 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C13 H9 N3 O3 S' 
_chem_comp.formula_weight    287.294 
_chem_comp.id                M89 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3 C3 M89 doub 324 n n 
C3 N2 M89 sing 325 n n 
C3 C4 M89 sing 326 n n 
O2 C4 M89 doub 327 n n 
N2 C2 M89 sing 328 n n 
C4 N1 M89 sing 329 n n 
C2 C5 M89 sing 330 n n 
C2 C1 M89 doub 331 n n 
N1 C1 M89 sing 332 n n 
C5 S1 M89 sing 333 n n 
C5 C6 M89 sing 334 n n 
S1 C8 M89 sing 335 n n 
C6 O1 M89 sing 336 n n 
C8 C11 M89 sing 337 n y 
C8 C7 M89 doub 338 n y 
O1 C7 M89 sing 339 n n 
C11 C10 M89 doub 340 n y 
C7 C12 M89 sing 341 n y 
C10 C9 M89 sing 342 n y 
C12 C9 M89 doub 343 n y 
C9 C13 M89 sing 344 n n 
C13 N3 M89 trip 345 n n 
N1 HN1 M89 sing 346 n n 
C5 H5 M89 sing 347 n n 
C6 H61 M89 sing 348 n n 
C6 H62 M89 sing 349 n n 
C10 H10 M89 sing 350 n n 
C1 H1 M89 sing 351 n n 
N2 HN2 M89 sing 352 n n 
C11 H11 M89 sing 353 n n 
C12 H12 M89 sing 354 n n 
#
_atom_sites.entry_id                     7U9U 
_atom_sites.fract_transf_matrix[1][1]    0.008143 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013623 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012531 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 401 401 FAD FAD . 
D 3 BEZ A 1 402 402 BEZ CHA . 
E 2 FAD B 1 401 401 FAD FAD . 
F 4 M89 B 1 402 402 M89 LIG . 
G 5 HOH A 1 501 501 HOH HOH . 
G 5 HOH A 2 502 502 HOH HOH . 
G 5 HOH A 3 503 503 HOH HOH . 
G 5 HOH A 4 504 504 HOH HOH . 
G 5 HOH A 5 505 505 HOH HOH . 
G 5 HOH A 6 506 506 HOH HOH . 
G 5 HOH A 7 507 507 HOH HOH . 
G 5 HOH A 8 508 508 HOH HOH . 
G 5 HOH A 9 509 509 HOH HOH . 
G 5 HOH A 10 510 510 HOH HOH . 
G 5 HOH A 11 511 511 HOH HOH . 
G 5 HOH A 12 512 512 HOH HOH . 
G 5 HOH A 13 513 513 HOH HOH . 
G 5 HOH A 14 514 514 HOH HOH . 
G 5 HOH A 15 515 515 HOH HOH . 
G 5 HOH A 16 516 516 HOH HOH . 
G 5 HOH A 17 517 517 HOH HOH . 
G 5 HOH A 18 518 518 HOH HOH . 
G 5 HOH A 19 519 519 HOH HOH . 
G 5 HOH A 20 520 520 HOH HOH . 
G 5 HOH A 21 521 521 HOH HOH . 
G 5 HOH A 22 522 522 HOH HOH . 
G 5 HOH A 23 523 523 HOH HOH . 
G 5 HOH A 24 524 524 HOH HOH . 
G 5 HOH A 25 525 525 HOH HOH . 
G 5 HOH A 26 526 526 HOH HOH . 
G 5 HOH A 27 527 527 HOH HOH . 
G 5 HOH A 28 528 528 HOH HOH . 
G 5 HOH A 29 529 529 HOH HOH . 
G 5 HOH A 30 530 530 HOH HOH . 
G 5 HOH A 31 531 531 HOH HOH . 
G 5 HOH A 32 532 532 HOH HOH . 
G 5 HOH A 33 533 533 HOH HOH . 
G 5 HOH A 34 534 534 HOH HOH . 
G 5 HOH A 35 535 535 HOH HOH . 
G 5 HOH A 36 536 536 HOH HOH . 
G 5 HOH A 37 537 537 HOH HOH . 
G 5 HOH A 38 538 538 HOH HOH . 
G 5 HOH A 39 539 539 HOH HOH . 
G 5 HOH A 40 540 540 HOH HOH . 
G 5 HOH A 41 541 541 HOH HOH . 
G 5 HOH A 42 542 542 HOH HOH . 
G 5 HOH A 43 543 543 HOH HOH . 
G 5 HOH A 44 544 544 HOH HOH . 
G 5 HOH A 45 545 545 HOH HOH . 
G 5 HOH A 46 546 546 HOH HOH . 
G 5 HOH A 47 547 547 HOH HOH . 
G 5 HOH A 48 548 548 HOH HOH . 
G 5 HOH A 49 549 549 HOH HOH . 
G 5 HOH A 50 550 550 HOH HOH . 
G 5 HOH A 51 551 551 HOH HOH . 
G 5 HOH A 52 552 552 HOH HOH . 
G 5 HOH A 53 553 553 HOH HOH . 
G 5 HOH A 54 554 554 HOH HOH . 
G 5 HOH A 55 555 555 HOH HOH . 
G 5 HOH A 56 556 556 HOH HOH . 
G 5 HOH A 57 557 557 HOH HOH . 
G 5 HOH A 58 558 558 HOH HOH . 
G 5 HOH A 59 559 559 HOH HOH . 
G 5 HOH A 60 560 560 HOH HOH . 
G 5 HOH A 61 561 561 HOH HOH . 
G 5 HOH A 62 562 562 HOH HOH . 
G 5 HOH A 63 563 563 HOH HOH . 
G 5 HOH A 64 564 564 HOH HOH . 
G 5 HOH A 65 565 565 HOH HOH . 
G 5 HOH A 66 566 566 HOH HOH . 
G 5 HOH A 67 567 567 HOH HOH . 
G 5 HOH A 68 568 568 HOH HOH . 
G 5 HOH A 69 569 569 HOH HOH . 
G 5 HOH A 70 570 570 HOH HOH . 
G 5 HOH A 71 571 571 HOH HOH . 
G 5 HOH A 72 572 572 HOH HOH . 
G 5 HOH A 73 573 573 HOH HOH . 
G 5 HOH A 74 574 574 HOH HOH . 
G 5 HOH A 75 575 575 HOH HOH . 
G 5 HOH A 76 576 576 HOH HOH . 
G 5 HOH A 77 577 577 HOH HOH . 
G 5 HOH A 78 578 578 HOH HOH . 
G 5 HOH A 79 579 579 HOH HOH . 
G 5 HOH A 80 580 580 HOH HOH . 
G 5 HOH A 81 581 581 HOH HOH . 
G 5 HOH A 82 582 582 HOH HOH . 
G 5 HOH A 83 583 583 HOH HOH . 
G 5 HOH A 84 584 584 HOH HOH . 
G 5 HOH A 85 585 585 HOH HOH . 
G 5 HOH A 86 586 586 HOH HOH . 
G 5 HOH A 87 587 587 HOH HOH . 
G 5 HOH A 88 588 588 HOH HOH . 
G 5 HOH A 89 589 589 HOH HOH . 
G 5 HOH A 90 590 590 HOH HOH . 
G 5 HOH A 91 591 591 HOH HOH . 
G 5 HOH A 92 592 592 HOH HOH . 
G 5 HOH A 93 593 593 HOH HOH . 
G 5 HOH A 94 594 594 HOH HOH . 
G 5 HOH A 95 595 595 HOH HOH . 
G 5 HOH A 96 596 596 HOH HOH . 
G 5 HOH A 97 597 597 HOH HOH . 
G 5 HOH A 98 598 598 HOH HOH . 
G 5 HOH A 99 599 599 HOH HOH . 
G 5 HOH A 100 600 600 HOH HOH . 
G 5 HOH A 101 601 601 HOH HOH . 
G 5 HOH A 102 602 602 HOH HOH . 
G 5 HOH A 103 603 603 HOH HOH . 
G 5 HOH A 104 604 604 HOH HOH . 
G 5 HOH A 105 605 605 HOH HOH . 
G 5 HOH A 106 606 606 HOH HOH . 
G 5 HOH A 107 607 607 HOH HOH . 
G 5 HOH A 108 608 608 HOH HOH . 
G 5 HOH A 109 609 609 HOH HOH . 
G 5 HOH A 110 610 610 HOH HOH . 
G 5 HOH A 111 611 611 HOH HOH . 
G 5 HOH A 112 612 612 HOH HOH . 
G 5 HOH A 113 613 613 HOH HOH . 
G 5 HOH A 114 614 614 HOH HOH . 
G 5 HOH A 115 615 615 HOH HOH . 
G 5 HOH A 116 616 616 HOH HOH . 
G 5 HOH A 117 617 617 HOH HOH . 
G 5 HOH A 118 618 618 HOH HOH . 
G 5 HOH A 119 619 619 HOH HOH . 
G 5 HOH A 120 620 620 HOH HOH . 
H 5 HOH B 1 501 501 HOH HOH . 
H 5 HOH B 2 502 502 HOH HOH . 
H 5 HOH B 3 503 503 HOH HOH . 
H 5 HOH B 4 504 504 HOH HOH . 
H 5 HOH B 5 505 505 HOH HOH . 
H 5 HOH B 6 506 506 HOH HOH . 
H 5 HOH B 7 507 507 HOH HOH . 
H 5 HOH B 8 508 508 HOH HOH . 
H 5 HOH B 9 509 509 HOH HOH . 
H 5 HOH B 10 510 510 HOH HOH . 
H 5 HOH B 11 511 511 HOH HOH . 
H 5 HOH B 12 512 512 HOH HOH . 
H 5 HOH B 13 513 513 HOH HOH . 
H 5 HOH B 14 514 514 HOH HOH . 
H 5 HOH B 15 515 515 HOH HOH . 
H 5 HOH B 16 516 516 HOH HOH . 
H 5 HOH B 17 517 517 HOH HOH . 
H 5 HOH B 18 518 518 HOH HOH . 
H 5 HOH B 19 519 519 HOH HOH . 
H 5 HOH B 20 520 520 HOH HOH . 
H 5 HOH B 21 521 521 HOH HOH . 
H 5 HOH B 22 522 522 HOH HOH . 
H 5 HOH B 23 523 523 HOH HOH . 
H 5 HOH B 24 524 524 HOH HOH . 
H 5 HOH B 25 525 525 HOH HOH . 
H 5 HOH B 26 526 526 HOH HOH . 
H 5 HOH B 27 527 527 HOH HOH . 
H 5 HOH B 28 528 528 HOH HOH . 
H 5 HOH B 29 529 529 HOH HOH . 
H 5 HOH B 30 530 530 HOH HOH . 
H 5 HOH B 31 531 531 HOH HOH . 
H 5 HOH B 32 532 532 HOH HOH . 
H 5 HOH B 33 533 533 HOH HOH . 
H 5 HOH B 34 534 534 HOH HOH . 
H 5 HOH B 35 535 535 HOH HOH . 
H 5 HOH B 36 536 536 HOH HOH . 
H 5 HOH B 37 537 537 HOH HOH . 
H 5 HOH B 38 538 538 HOH HOH . 
H 5 HOH B 39 539 539 HOH HOH . 
H 5 HOH B 40 540 540 HOH HOH . 
H 5 HOH B 41 541 541 HOH HOH . 
H 5 HOH B 42 542 542 HOH HOH . 
H 5 HOH B 43 543 543 HOH HOH . 
H 5 HOH B 44 544 544 HOH HOH . 
H 5 HOH B 45 545 545 HOH HOH . 
H 5 HOH B 46 546 546 HOH HOH . 
H 5 HOH B 47 547 547 HOH HOH . 
H 5 HOH B 48 548 548 HOH HOH . 
H 5 HOH B 49 549 549 HOH HOH . 
H 5 HOH B 50 550 550 HOH HOH . 
H 5 HOH B 51 551 551 HOH HOH . 
H 5 HOH B 52 552 552 HOH HOH . 
H 5 HOH B 53 553 553 HOH HOH . 
H 5 HOH B 54 554 554 HOH HOH . 
H 5 HOH B 55 555 555 HOH HOH . 
H 5 HOH B 56 556 556 HOH HOH . 
H 5 HOH B 57 557 557 HOH HOH . 
H 5 HOH B 58 558 558 HOH HOH . 
H 5 HOH B 59 559 559 HOH HOH . 
H 5 HOH B 60 560 560 HOH HOH . 
H 5 HOH B 61 561 561 HOH HOH . 
H 5 HOH B 62 562 562 HOH HOH . 
H 5 HOH B 63 563 563 HOH HOH . 
H 5 HOH B 64 564 564 HOH HOH . 
H 5 HOH B 65 565 565 HOH HOH . 
H 5 HOH B 66 566 566 HOH HOH . 
H 5 HOH B 67 567 567 HOH HOH . 
H 5 HOH B 68 568 568 HOH HOH . 
H 5 HOH B 69 569 569 HOH HOH . 
H 5 HOH B 70 570 570 HOH HOH . 
H 5 HOH B 71 571 571 HOH HOH . 
H 5 HOH B 72 572 572 HOH HOH . 
H 5 HOH B 73 573 573 HOH HOH . 
H 5 HOH B 74 574 574 HOH HOH . 
H 5 HOH B 75 575 575 HOH HOH . 
H 5 HOH B 76 576 576 HOH HOH . 
H 5 HOH B 77 577 577 HOH HOH . 
H 5 HOH B 78 578 578 HOH HOH . 
H 5 HOH B 79 579 579 HOH HOH . 
H 5 HOH B 80 580 580 HOH HOH . 
H 5 HOH B 81 581 581 HOH HOH . 
H 5 HOH B 82 582 582 HOH HOH . 
H 5 HOH B 83 583 583 HOH HOH . 
H 5 HOH B 84 584 584 HOH HOH . 
H 5 HOH B 85 585 585 HOH HOH . 
H 5 HOH B 86 586 586 HOH HOH . 
H 5 HOH B 87 587 587 HOH HOH . 
H 5 HOH B 88 588 588 HOH HOH . 
H 5 HOH B 89 589 589 HOH HOH . 
H 5 HOH B 90 590 590 HOH HOH . 
H 5 HOH B 91 591 591 HOH HOH . 
H 5 HOH B 92 592 592 HOH HOH . 
H 5 HOH B 93 593 593 HOH HOH . 
H 5 HOH B 94 594 594 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 M89 . . . F 4 -14.632 12.958 0.544 1 41.44 ? N1 M89 402 B 1 
HETATM 2 N N3 M89 . . . F 4 -12.676 14.617 7.49 1 46.19 ? N3 M89 402 B 1 
HETATM 3 C C4 M89 . . . F 4 -14.491 14.05 -0.237 1 30.57 ? C4 M89 402 B 1 
HETATM 4 C C5 M89 . . . F 4 -11.131 11.526 0.665 1 31.13 ? C5 M89 402 B 1 
HETATM 5 C C6 M89 . . . F 4 -11.34 10.461 1.72 1 34.02 ? C6 M89 402 B 1 
HETATM 6 C C7 M89 . . . F 4 -11.402 12.182 3.479 1 41.58 ? C7 M89 402 B 1 
HETATM 7 C C8 M89 . . . F 4 -10.468 13.036 2.803 1 42.89 ? C8 M89 402 B 1 
HETATM 8 C C10 M89 . . . F 4 -10.652 14.666 4.606 1 44.18 ? C10 M89 402 B 1 
HETATM 9 C C13 M89 . . . F 4 -12.182 14.264 6.51 1 43.83 ? C13 M89 402 B 1 
HETATM 10 C C1 M89 . . . F 4 -13.577 12.135 0.851 1 29.05 ? C1 M89 402 B 1 
HETATM 11 C C2 M89 . . . F 4 -12.342 12.37 0.382 1 37.06 ? C2 M89 402 B 1 
HETATM 12 N N2 M89 . . . F 4 -12.08 13.471 -0.412 1 33.11 ? N2 M89 402 B 1 
HETATM 13 C C3 M89 . . . F 4 -13.023 14.349 -0.765 1 27.71 ? C3 M89 402 B 1 
HETATM 14 O O1 M89 . . . F 4 -11.808 10.969 2.951 1 48.7 ? O1 M89 402 B 1 
HETATM 15 S S1 M89 . . . F 4 -9.801 12.577 1.236 1 47.08 ? S1 M89 402 B 1 
HETATM 16 C C9 M89 . . . F 4 -11.582 13.835 5.266 1 52.43 ? C9 M89 402 B 1 
HETATM 17 C C11 M89 . . . F 4 -10.091 14.264 3.378 1 48.45 ? C11 M89 402 B 1 
HETATM 18 C C12 M89 . . . F 4 -11.948 12.596 4.708 1 50.09 ? C12 M89 402 B 1 
HETATM 19 O O2 M89 . . . F 4 -15.415 14.781 -0.545 1 36.61 ? O2 M89 402 B 1 
HETATM 20 O O3 M89 . . . F 4 -12.805 15.336 -1.46 1 29.83 ? O3 M89 402 B 1 
HETATM 21 H HN1 M89 . . . F 4 -15.544 12.728 0.94 1 43.44 ? HN1 M89 402 B 1 
HETATM 22 H H5 M89 . . . F 4 -10.838 11.048 -0.268 1 33.13 ? H5 M89 402 B 1 
HETATM 23 H H61 M89 . . . F 4 -10.395 9.975 1.888 1 36.02 ? H61 M89 402 B 1 
HETATM 24 H H62 M89 . . . F 4 -12.041 9.702 1.373 1 36.02 ? H62 M89 402 B 1 
HETATM 25 H H10 M89 . . . F 4 -10.376 15.617 5.038 1 46.18 ? H10 M89 402 B 1 
HETATM 26 H H1 M89 . . . F 4 -13.838 11.3 1.488 1 31.05 ? H1 M89 402 B 1 
HETATM 27 H HN2 M89 . . . F 4 -11.124 13.611 -0.716 1 35.11 ? HN2 M89 402 B 1 
HETATM 28 H H11 M89 . . . F 4 -9.386 14.906 2.869 1 50.45 ? H11 M89 402 B 1 
HETATM 29 H H12 M89 . . . F 4 -12.664 11.965 5.217 1 52.09 ? H12 M89 402 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#