data_7UA5 # _model_server_result.job_id sEjgW3ZxejkY-hnU2bfkew _model_server_result.datetime_utc '2024-10-19 09:40:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ua5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":5002}' # _entry.id 7UA5 # _exptl.entry_id 7UA5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UA5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N ? 4 M N N ? 4 N N N ? 4 P N N ? 4 Q N N ? 4 S N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4806 A CYS 4806 1_555 A SG CYS 4812 A CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 F SG CYS 4806 B CYS 4806 1_555 F SG CYS 4812 B CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 G SG CYS 4806 C CYS 4806 1_555 G SG CYS 4812 C CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 H SG CYS 4806 D CYS 4806 1_555 H SG CYS 4812 D CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A SG CYS 4888 A CYS 4888 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A SG CYS 4891 A CYS 4891 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc3 A NE2 HIS 4908 A HIS 4908 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc4 A ND1 HIS 4913 A HIS 4913 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc5 F SG CYS 4888 B CYS 4888 1_555 L ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc6 F SG CYS 4891 B CYS 4891 1_555 L ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc7 F NE2 HIS 4908 B HIS 4908 1_555 L ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc8 F ND1 HIS 4913 B HIS 4913 1_555 L ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc9 G SG CYS 4888 C CYS 4888 1_555 O ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc10 G SG CYS 4891 C CYS 4891 1_555 O ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc11 G NE2 HIS 4908 C HIS 4908 1_555 O ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc12 G ND1 HIS 4913 C HIS 4913 1_555 O ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc13 H SG CYS 4888 D CYS 4888 1_555 R ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc14 H SG CYS 4891 D CYS 4891 1_555 R ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc15 H NE2 HIS 4908 D HIS 4908 1_555 R ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc16 H ND1 HIS 4913 D HIS 4913 1_555 R ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7UA5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN A 1 5001 5001 ZN ZN . J 4 ATP A 1 5002 5002 ATP ATP . K 4 ATP A 1 5003 5005 ATP ATP . L 3 ZN B 1 5001 5001 ZN ZN . M 4 ATP B 1 5002 5002 ATP ATP . N 4 ATP B 1 5003 5005 ATP ATP . O 3 ZN C 1 5001 5001 ZN ZN . P 4 ATP C 1 5002 5002 ATP ATP . Q 4 ATP C 1 5003 5005 ATP ATP . R 3 ZN D 1 5001 5001 ZN ZN . S 4 ATP D 1 5002 5002 ATP ATP . T 4 ATP D 1 5003 5005 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . P 4 216.271 188.827 259.305 1 81.6 ? PG ATP 5002 C 1 HETATM 2 O O1G ATP . . . P 4 216.904 188.716 260.65 1 81.6 ? O1G ATP 5002 C 1 HETATM 3 O O2G ATP . . . P 4 216.367 187.549 258.467 1 81.6 ? O2G ATP 5002 C 1 HETATM 4 O O3G ATP . . . P 4 214.809 189.285 259.35 1 81.6 ? O3G ATP 5002 C 1 HETATM 5 P PB ATP . . . P 4 216.753 190.848 257.153 1 81.6 ? PB ATP 5002 C 1 HETATM 6 O O1B ATP . . . P 4 216.642 190.049 255.917 1 81.6 ? O1B ATP 5002 C 1 HETATM 7 O O2B ATP . . . P 4 215.556 191.743 257.474 1 81.6 ? O2B ATP 5002 C 1 HETATM 8 O O3B ATP . . . P 4 217.011 189.937 258.428 1 81.6 ? O3B ATP 5002 C 1 HETATM 9 P PA ATP . . . P 4 218.406 193.264 256.729 1 81.6 ? PA ATP 5002 C 1 HETATM 10 O O1A ATP . . . P 4 219.545 193.305 255.791 1 81.6 ? O1A ATP 5002 C 1 HETATM 11 O O2A ATP . . . P 4 218.596 194.063 258.019 1 81.6 ? O2A ATP 5002 C 1 HETATM 12 O O3A ATP . . . P 4 218.048 191.774 257.151 1 81.6 ? O3A ATP 5002 C 1 HETATM 13 O O5' ATP . . . P 4 217.077 193.753 256.031 1 81.6 ? O5' ATP 5002 C 1 HETATM 14 C C5' ATP . . . P 4 216.9 193.65 254.603 1 81.6 ? C5' ATP 5002 C 1 HETATM 15 C C4' ATP . . . P 4 216.468 194.996 254.08 1 81.6 ? C4' ATP 5002 C 1 HETATM 16 O O4' ATP . . . P 4 217.606 195.684 253.513 1 81.6 ? O4' ATP 5002 C 1 HETATM 17 C C3' ATP . . . P 4 215.391 194.962 252.993 1 81.6 ? C3' ATP 5002 C 1 HETATM 18 O O3' ATP . . . P 4 214.411 195.969 253.214 1 81.6 ? O3' ATP 5002 C 1 HETATM 19 C C2' ATP . . . P 4 216.185 195.215 251.709 1 81.6 ? C2' ATP 5002 C 1 HETATM 20 O O2' ATP . . . P 4 215.397 195.868 250.72 1 81.6 ? O2' ATP 5002 C 1 HETATM 21 C C1' ATP . . . P 4 217.28 196.148 252.22 1 81.6 ? C1' ATP 5002 C 1 HETATM 22 N N9 ATP . . . P 4 218.492 196.157 251.408 1 81.6 ? N9 ATP 5002 C 1 HETATM 23 C C8 ATP . . . P 4 219.059 197.243 250.793 1 81.6 ? C8 ATP 5002 C 1 HETATM 24 N N7 ATP . . . P 4 220.149 196.969 250.12 1 81.6 ? N7 ATP 5002 C 1 HETATM 25 C C5 ATP . . . P 4 220.313 195.604 250.303 1 81.6 ? C5 ATP 5002 C 1 HETATM 26 C C6 ATP . . . P 4 221.285 194.694 249.845 1 81.6 ? C6 ATP 5002 C 1 HETATM 27 N N6 ATP . . . P 4 222.322 195.039 249.075 1 81.6 ? N6 ATP 5002 C 1 HETATM 28 N N1 ATP . . . P 4 221.155 193.4 250.209 1 81.6 ? N1 ATP 5002 C 1 HETATM 29 C C2 ATP . . . P 4 220.122 193.049 250.978 1 81.6 ? C2 ATP 5002 C 1 HETATM 30 N N3 ATP . . . P 4 219.146 193.816 251.469 1 81.6 ? N3 ATP 5002 C 1 HETATM 31 C C4 ATP . . . P 4 219.298 195.09 251.094 1 81.6 ? C4 ATP 5002 C 1 # _model_server_stats.io_time_ms 335 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 188 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #