data_7UA9 # _model_server_result.job_id N_PUxJnAhEGJk_oucztzeg _model_server_result.datetime_utc '2024-10-15 14:31:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ua9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":5005}' # _entry.id 7UA9 # _exptl.entry_id 7UA9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UA9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 M N N ? 4 O N N ? 4 R N N ? 4 T N N ? 4 W N N ? 4 Y N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 36 A CYS 36 1_555 E SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 E SG CYS 4806 A CYS 4806 1_555 E SG CYS 4812 A CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 F SG CYS 36 B CYS 36 1_555 F SG CYS 65 B CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 F SG CYS 4806 B CYS 4806 1_555 F SG CYS 4812 B CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 G SG CYS 36 C CYS 36 1_555 G SG CYS 65 C CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 G SG CYS 4806 C CYS 4806 1_555 G SG CYS 4812 C CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 H SG CYS 36 D CYS 36 1_555 H SG CYS 65 D CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 H SG CYS 4806 D CYS 4806 1_555 H SG CYS 4812 D CYS 4812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 E OE1 GLU 3848 A GLU 3848 1_555 K CA CA . A CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc2 E OE2 GLU 3848 A GLU 3848 1_555 K CA CA . A CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc3 E OE1 GLU 3922 A GLU 3922 1_555 K CA CA . A CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc4 E OE2 GLU 3922 A GLU 3922 1_555 K CA CA . A CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc5 E SG CYS 4888 A CYS 4888 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc6 E SG CYS 4891 A CYS 4891 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc7 E NE2 HIS 4908 A HIS 4908 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc8 E ND1 HIS 4913 A HIS 4913 1_555 I ZN ZN . A ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc9 E O THR 4931 A THR 4931 1_555 K CA CA . A CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc10 F OE1 GLU 3848 B GLU 3848 1_555 P CA CA . B CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc11 F OE2 GLU 3848 B GLU 3848 1_555 P CA CA . B CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc12 F OE1 GLU 3922 B GLU 3922 1_555 P CA CA . B CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc13 F OE2 GLU 3922 B GLU 3922 1_555 P CA CA . B CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc14 F SG CYS 4888 B CYS 4888 1_555 N ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc15 F SG CYS 4891 B CYS 4891 1_555 N ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc16 F NE2 HIS 4908 B HIS 4908 1_555 N ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc17 F ND1 HIS 4913 B HIS 4913 1_555 N ZN ZN . B ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc18 F O THR 4931 B THR 4931 1_555 P CA CA . B CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc19 G OE1 GLU 3848 C GLU 3848 1_555 U CA CA . C CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc20 G OE2 GLU 3848 C GLU 3848 1_555 U CA CA . C CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc21 G OE1 GLU 3922 C GLU 3922 1_555 U CA CA . C CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc22 G OE2 GLU 3922 C GLU 3922 1_555 U CA CA . C CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc23 G SG CYS 4888 C CYS 4888 1_555 S ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc24 G SG CYS 4891 C CYS 4891 1_555 S ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc25 G NE2 HIS 4908 C HIS 4908 1_555 S ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc26 G ND1 HIS 4913 C HIS 4913 1_555 S ZN ZN . C ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc27 G O THR 4931 C THR 4931 1_555 U CA CA . C CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc28 H OE1 GLU 3848 D GLU 3848 1_555 Z CA CA . D CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc29 H OE2 GLU 3848 D GLU 3848 1_555 Z CA CA . D CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc30 H OE1 GLU 3922 D GLU 3922 1_555 Z CA CA . D CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc31 H OE2 GLU 3922 D GLU 3922 1_555 Z CA CA . D CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc32 H SG CYS 4888 D CYS 4888 1_555 X ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc33 H SG CYS 4891 D CYS 4891 1_555 X ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc34 H NE2 HIS 4908 D HIS 4908 1_555 X ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc35 H ND1 HIS 4913 D HIS 4913 1_555 X ZN ZN . D ZN 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc36 H O THR 4931 D THR 4931 1_555 Z CA CA . D CA 5003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7UA9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN A 1 5001 5001 ZN ZN . J 4 ATP A 1 5002 5002 ATP ATP . K 5 CA A 1 5003 5003 CA CA . L 6 XAN A 1 5004 5004 XAN XAN . M 4 ATP A 1 5005 5005 ATP ATP . N 3 ZN B 1 5001 5001 ZN ZN . O 4 ATP B 1 5002 5002 ATP ATP . P 5 CA B 1 5003 5003 CA CA . Q 6 XAN B 1 5004 5004 XAN XAN . R 4 ATP B 1 5005 5005 ATP ATP . S 3 ZN C 1 5001 5001 ZN ZN . T 4 ATP C 1 5002 5002 ATP ATP . U 5 CA C 1 5003 5003 CA CA . V 6 XAN C 1 5004 5004 XAN XAN . W 4 ATP C 1 5005 5005 ATP ATP . X 3 ZN D 1 5001 5001 ZN ZN . Y 4 ATP D 1 5002 5002 ATP ATP . Z 5 CA D 1 5003 5003 CA CA . AA 6 XAN D 1 5004 5004 XAN XAN . BA 4 ATP D 1 5005 5005 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . W 4 366.102 161.886 185.254 1 231.88 ? PG ATP 5005 C 1 HETATM 2 O O1G ATP . . . W 4 365.529 161.844 186.629 1 231.88 ? O1G ATP 5005 C 1 HETATM 3 O O2G ATP . . . W 4 366.507 160.51 184.714 1 231.88 ? O2G ATP 5005 C 1 HETATM 4 O O3G ATP . . . W 4 365.197 162.58 184.23 1 231.88 ? O3G ATP 5005 C 1 HETATM 5 P PB ATP . . . W 4 367.945 164.242 185.393 1 231.88 ? PB ATP 5005 C 1 HETATM 6 O O1B ATP . . . W 4 367.518 165.082 184.256 1 231.88 ? O1B ATP 5005 C 1 HETATM 7 O O2B ATP . . . W 4 367.5 164.723 186.775 1 231.88 ? O2B ATP 5005 C 1 HETATM 8 O O3B ATP . . . W 4 367.454 162.738 185.237 1 231.88 ? O3B ATP 5005 C 1 HETATM 9 P PA ATP . . . W 4 370.751 164.767 186.17 1 231.88 ? PA ATP 5005 C 1 HETATM 10 O O1A ATP . . . W 4 371.689 163.776 186.736 1 231.88 ? O1A ATP 5005 C 1 HETATM 11 O O2A ATP . . . W 4 370.167 165.754 187.182 1 231.88 ? O2A ATP 5005 C 1 HETATM 12 O O3A ATP . . . W 4 369.526 164.063 185.441 1 231.88 ? O3A ATP 5005 C 1 HETATM 13 O O5' ATP . . . W 4 371.419 165.593 185.001 1 231.88 ? O5' ATP 5005 C 1 HETATM 14 C C5' ATP . . . W 4 370.893 166.873 184.594 1 231.88 ? C5' ATP 5005 C 1 HETATM 15 C C4' ATP . . . W 4 371.74 167.408 183.466 1 231.88 ? C4' ATP 5005 C 1 HETATM 16 O O4' ATP . . . W 4 372.693 168.359 183.986 1 231.88 ? O4' ATP 5005 C 1 HETATM 17 C C3' ATP . . . W 4 372.588 166.37 182.743 1 231.88 ? C3' ATP 5005 C 1 HETATM 18 O O3' ATP . . . W 4 371.836 165.714 181.728 1 231.88 ? O3' ATP 5005 C 1 HETATM 19 C C2' ATP . . . W 4 373.714 167.224 182.156 1 231.88 ? C2' ATP 5005 C 1 HETATM 20 O O2' ATP . . . W 4 373.343 167.804 180.91 1 231.88 ? O2' ATP 5005 C 1 HETATM 21 C C1' ATP . . . W 4 373.889 168.311 183.225 1 231.88 ? C1' ATP 5005 C 1 HETATM 22 N N9 ATP . . . W 4 375.012 168.088 184.132 1 231.88 ? N9 ATP 5005 C 1 HETATM 23 C C8 ATP . . . W 4 376.262 168.643 184.041 1 231.88 ? C8 ATP 5005 C 1 HETATM 24 N N7 ATP . . . W 4 377.085 168.272 184.991 1 231.88 ? N7 ATP 5005 C 1 HETATM 25 C C5 ATP . . . W 4 376.324 167.409 185.765 1 231.88 ? C5 ATP 5005 C 1 HETATM 26 C C6 ATP . . . W 4 376.613 166.672 186.929 1 231.88 ? C6 ATP 5005 C 1 HETATM 27 N N6 ATP . . . W 4 377.8 166.687 187.545 1 231.88 ? N6 ATP 5005 C 1 HETATM 28 N N1 ATP . . . W 4 375.628 165.906 187.45 1 231.88 ? N1 ATP 5005 C 1 HETATM 29 C C2 ATP . . . W 4 374.44 165.886 186.841 1 231.88 ? C2 ATP 5005 C 1 HETATM 30 N N3 ATP . . . W 4 374.052 166.537 185.741 1 231.88 ? N3 ATP 5005 C 1 HETATM 31 C C4 ATP . . . W 4 375.044 167.286 185.247 1 231.88 ? C4 ATP 5005 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 178 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #