data_7UDQ # _model_server_result.job_id zJ9-M-swAbiyyVGZ-rIR2g _model_server_result.datetime_utc '2024-10-19 09:19:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7udq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 7UDQ # _exptl.entry_id 7UDQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 109.79 _cell.angle_beta 94.62 _cell.angle_gamma 92.11 _cell.entry_id 7UDQ _cell.length_a 48.273 _cell.length_b 54.859 _cell.length_c 80.012 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UDQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 86 A SER 340 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 A OE1 GLU 151 A GLU 405 1_555 D NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc3 A O ARG 162 A ARG 416 1_555 E NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc4 A OD1 ASP 166 A ASP 420 1_555 E NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc5 A OD2 ASP 166 A ASP 420 1_555 E NA NA . A NA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.049 ? metalc ? metalc6 D NA NA . A NA 702 1_555 G O HOH . A HOH 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc7 E NA NA . A NA 703 1_555 G O HOH . A HOH 924 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7UDQ _atom_sites.fract_transf_matrix[1][1] 0.020716 _atom_sites.fract_transf_matrix[1][2] 0.000763 _atom_sites.fract_transf_matrix[1][3] 0.002061 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018241 _atom_sites.fract_transf_matrix[2][3] 0.006658 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MVS A 1 701 701 MVS LIG . D 3 NA A 1 702 1 NA NA . E 3 NA A 1 703 2 NA NA . F 2 MVS B 1 701 701 MVS LIG . G 4 HOH A 1 801 343 HOH HOH . G 4 HOH A 2 802 200 HOH HOH . G 4 HOH A 3 803 235 HOH HOH . G 4 HOH A 4 804 295 HOH HOH . G 4 HOH A 5 805 15 HOH HOH . G 4 HOH A 6 806 310 HOH HOH . G 4 HOH A 7 807 329 HOH HOH . G 4 HOH A 8 808 281 HOH HOH . G 4 HOH A 9 809 330 HOH HOH . G 4 HOH A 10 810 67 HOH HOH . G 4 HOH A 11 811 256 HOH HOH . G 4 HOH A 12 812 163 HOH HOH . G 4 HOH A 13 813 102 HOH HOH . G 4 HOH A 14 814 49 HOH HOH . G 4 HOH A 15 815 98 HOH HOH . G 4 HOH A 16 816 56 HOH HOH . G 4 HOH A 17 817 3 HOH HOH . G 4 HOH A 18 818 283 HOH HOH . G 4 HOH A 19 819 97 HOH HOH . G 4 HOH A 20 820 328 HOH HOH . G 4 HOH A 21 821 192 HOH HOH . G 4 HOH A 22 822 264 HOH HOH . G 4 HOH A 23 823 140 HOH HOH . G 4 HOH A 24 824 41 HOH HOH . G 4 HOH A 25 825 115 HOH HOH . G 4 HOH A 26 826 153 HOH HOH . G 4 HOH A 27 827 110 HOH HOH . G 4 HOH A 28 828 54 HOH HOH . G 4 HOH A 29 829 2 HOH HOH . G 4 HOH A 30 830 63 HOH HOH . G 4 HOH A 31 831 65 HOH HOH . G 4 HOH A 32 832 39 HOH HOH . G 4 HOH A 33 833 94 HOH HOH . G 4 HOH A 34 834 31 HOH HOH . G 4 HOH A 35 835 35 HOH HOH . G 4 HOH A 36 836 22 HOH HOH . G 4 HOH A 37 837 99 HOH HOH . G 4 HOH A 38 838 180 HOH HOH . G 4 HOH A 39 839 68 HOH HOH . G 4 HOH A 40 840 19 HOH HOH . G 4 HOH A 41 841 197 HOH HOH . G 4 HOH A 42 842 43 HOH HOH . G 4 HOH A 43 843 53 HOH HOH . G 4 HOH A 44 844 52 HOH HOH . G 4 HOH A 45 845 129 HOH HOH . G 4 HOH A 46 846 239 HOH HOH . G 4 HOH A 47 847 271 HOH HOH . G 4 HOH A 48 848 4 HOH HOH . G 4 HOH A 49 849 46 HOH HOH . G 4 HOH A 50 850 76 HOH HOH . G 4 HOH A 51 851 9 HOH HOH . G 4 HOH A 52 852 131 HOH HOH . G 4 HOH A 53 853 186 HOH HOH . G 4 HOH A 54 854 64 HOH HOH . G 4 HOH A 55 855 7 HOH HOH . G 4 HOH A 56 856 29 HOH HOH . G 4 HOH A 57 857 125 HOH HOH . G 4 HOH A 58 858 136 HOH HOH . G 4 HOH A 59 859 25 HOH HOH . G 4 HOH A 60 860 6 HOH HOH . G 4 HOH A 61 861 170 HOH HOH . G 4 HOH A 62 862 74 HOH HOH . G 4 HOH A 63 863 198 HOH HOH . G 4 HOH A 64 864 1 HOH HOH . G 4 HOH A 65 865 189 HOH HOH . G 4 HOH A 66 866 224 HOH HOH . G 4 HOH A 67 867 144 HOH HOH . G 4 HOH A 68 868 5 HOH HOH . G 4 HOH A 69 869 306 HOH HOH . G 4 HOH A 70 870 212 HOH HOH . G 4 HOH A 71 871 190 HOH HOH . G 4 HOH A 72 872 230 HOH HOH . G 4 HOH A 73 873 57 HOH HOH . G 4 HOH A 74 874 311 HOH HOH . G 4 HOH A 75 875 79 HOH HOH . G 4 HOH A 76 876 83 HOH HOH . G 4 HOH A 77 877 340 HOH HOH . G 4 HOH A 78 878 191 HOH HOH . G 4 HOH A 79 879 199 HOH HOH . G 4 HOH A 80 880 165 HOH HOH . G 4 HOH A 81 881 161 HOH HOH . G 4 HOH A 82 882 319 HOH HOH . G 4 HOH A 83 883 222 HOH HOH . G 4 HOH A 84 884 107 HOH HOH . G 4 HOH A 85 885 27 HOH HOH . G 4 HOH A 86 886 82 HOH HOH . G 4 HOH A 87 887 326 HOH HOH . G 4 HOH A 88 888 162 HOH HOH . G 4 HOH A 89 889 155 HOH HOH . G 4 HOH A 90 890 236 HOH HOH . G 4 HOH A 91 891 321 HOH HOH . G 4 HOH A 92 892 218 HOH HOH . G 4 HOH A 93 893 337 HOH HOH . G 4 HOH A 94 894 309 HOH HOH . G 4 HOH A 95 895 324 HOH HOH . G 4 HOH A 96 896 122 HOH HOH . G 4 HOH A 97 897 60 HOH HOH . G 4 HOH A 98 898 220 HOH HOH . G 4 HOH A 99 899 314 HOH HOH . G 4 HOH A 100 900 42 HOH HOH . G 4 HOH A 101 901 93 HOH HOH . G 4 HOH A 102 902 243 HOH HOH . G 4 HOH A 103 903 147 HOH HOH . G 4 HOH A 104 904 335 HOH HOH . G 4 HOH A 105 905 171 HOH HOH . G 4 HOH A 106 906 164 HOH HOH . G 4 HOH A 107 907 336 HOH HOH . G 4 HOH A 108 908 299 HOH HOH . G 4 HOH A 109 909 325 HOH HOH . G 4 HOH A 110 910 344 HOH HOH . G 4 HOH A 111 911 207 HOH HOH . G 4 HOH A 112 912 327 HOH HOH . G 4 HOH A 113 913 201 HOH HOH . G 4 HOH A 114 914 149 HOH HOH . G 4 HOH A 115 915 146 HOH HOH . G 4 HOH A 116 916 32 HOH HOH . G 4 HOH A 117 917 181 HOH HOH . G 4 HOH A 118 918 178 HOH HOH . G 4 HOH A 119 919 302 HOH HOH . G 4 HOH A 120 920 183 HOH HOH . G 4 HOH A 121 921 130 HOH HOH . G 4 HOH A 122 922 259 HOH HOH . G 4 HOH A 123 923 143 HOH HOH . G 4 HOH A 124 924 157 HOH HOH . G 4 HOH A 125 925 158 HOH HOH . G 4 HOH A 126 926 318 HOH HOH . G 4 HOH A 127 927 101 HOH HOH . G 4 HOH A 128 928 184 HOH HOH . G 4 HOH A 129 929 244 HOH HOH . G 4 HOH A 130 930 47 HOH HOH . G 4 HOH A 131 931 262 HOH HOH . H 4 HOH B 1 801 305 HOH HOH . H 4 HOH B 2 802 40 HOH HOH . H 4 HOH B 3 803 72 HOH HOH . H 4 HOH B 4 804 77 HOH HOH . H 4 HOH B 5 805 273 HOH HOH . H 4 HOH B 6 806 248 HOH HOH . H 4 HOH B 7 807 258 HOH HOH . H 4 HOH B 8 808 152 HOH HOH . H 4 HOH B 9 809 169 HOH HOH . H 4 HOH B 10 810 21 HOH HOH . H 4 HOH B 11 811 284 HOH HOH . H 4 HOH B 12 812 59 HOH HOH . H 4 HOH B 13 813 278 HOH HOH . H 4 HOH B 14 814 69 HOH HOH . H 4 HOH B 15 815 208 HOH HOH . H 4 HOH B 16 816 50 HOH HOH . H 4 HOH B 17 817 123 HOH HOH . H 4 HOH B 18 818 234 HOH HOH . H 4 HOH B 19 819 30 HOH HOH . H 4 HOH B 20 820 8 HOH HOH . H 4 HOH B 21 821 124 HOH HOH . H 4 HOH B 22 822 156 HOH HOH . H 4 HOH B 23 823 117 HOH HOH . H 4 HOH B 24 824 187 HOH HOH . H 4 HOH B 25 825 89 HOH HOH . H 4 HOH B 26 826 33 HOH HOH . H 4 HOH B 27 827 274 HOH HOH . H 4 HOH B 28 828 95 HOH HOH . H 4 HOH B 29 829 38 HOH HOH . H 4 HOH B 30 830 44 HOH HOH . H 4 HOH B 31 831 346 HOH HOH . H 4 HOH B 32 832 227 HOH HOH . H 4 HOH B 33 833 151 HOH HOH . H 4 HOH B 34 834 221 HOH HOH . H 4 HOH B 35 835 338 HOH HOH . H 4 HOH B 36 836 300 HOH HOH . H 4 HOH B 37 837 304 HOH HOH . H 4 HOH B 38 838 108 HOH HOH . H 4 HOH B 39 839 18 HOH HOH . H 4 HOH B 40 840 48 HOH HOH . H 4 HOH B 41 841 104 HOH HOH . H 4 HOH B 42 842 285 HOH HOH . H 4 HOH B 43 843 116 HOH HOH . H 4 HOH B 44 844 134 HOH HOH . H 4 HOH B 45 845 114 HOH HOH . H 4 HOH B 46 846 138 HOH HOH . H 4 HOH B 47 847 90 HOH HOH . H 4 HOH B 48 848 11 HOH HOH . H 4 HOH B 49 849 176 HOH HOH . H 4 HOH B 50 850 71 HOH HOH . H 4 HOH B 51 851 17 HOH HOH . H 4 HOH B 52 852 333 HOH HOH . H 4 HOH B 53 853 345 HOH HOH . H 4 HOH B 54 854 215 HOH HOH . H 4 HOH B 55 855 13 HOH HOH . H 4 HOH B 56 856 103 HOH HOH . H 4 HOH B 57 857 249 HOH HOH . H 4 HOH B 58 858 62 HOH HOH . H 4 HOH B 59 859 118 HOH HOH . H 4 HOH B 60 860 87 HOH HOH . H 4 HOH B 61 861 84 HOH HOH . H 4 HOH B 62 862 113 HOH HOH . H 4 HOH B 63 863 219 HOH HOH . H 4 HOH B 64 864 75 HOH HOH . H 4 HOH B 65 865 80 HOH HOH . H 4 HOH B 66 866 142 HOH HOH . H 4 HOH B 67 867 100 HOH HOH . H 4 HOH B 68 868 10 HOH HOH . H 4 HOH B 69 869 51 HOH HOH . H 4 HOH B 70 870 26 HOH HOH . H 4 HOH B 71 871 139 HOH HOH . H 4 HOH B 72 872 280 HOH HOH . H 4 HOH B 73 873 12 HOH HOH . H 4 HOH B 74 874 23 HOH HOH . H 4 HOH B 75 875 86 HOH HOH . H 4 HOH B 76 876 45 HOH HOH . H 4 HOH B 77 877 14 HOH HOH . H 4 HOH B 78 878 339 HOH HOH . H 4 HOH B 79 879 307 HOH HOH . H 4 HOH B 80 880 137 HOH HOH . H 4 HOH B 81 881 78 HOH HOH . H 4 HOH B 82 882 166 HOH HOH . H 4 HOH B 83 883 92 HOH HOH . H 4 HOH B 84 884 111 HOH HOH . H 4 HOH B 85 885 121 HOH HOH . H 4 HOH B 86 886 61 HOH HOH . H 4 HOH B 87 887 172 HOH HOH . H 4 HOH B 88 888 112 HOH HOH . H 4 HOH B 89 889 323 HOH HOH . H 4 HOH B 90 890 322 HOH HOH . H 4 HOH B 91 891 37 HOH HOH . H 4 HOH B 92 892 109 HOH HOH . H 4 HOH B 93 893 317 HOH HOH . H 4 HOH B 94 894 55 HOH HOH . H 4 HOH B 95 895 36 HOH HOH . H 4 HOH B 96 896 250 HOH HOH . H 4 HOH B 97 897 16 HOH HOH . H 4 HOH B 98 898 132 HOH HOH . H 4 HOH B 99 899 58 HOH HOH . H 4 HOH B 100 900 275 HOH HOH . H 4 HOH B 101 901 24 HOH HOH . H 4 HOH B 102 902 209 HOH HOH . H 4 HOH B 103 903 105 HOH HOH . H 4 HOH B 104 904 265 HOH HOH . H 4 HOH B 105 905 246 HOH HOH . H 4 HOH B 106 906 135 HOH HOH . H 4 HOH B 107 907 276 HOH HOH . H 4 HOH B 108 908 120 HOH HOH . H 4 HOH B 109 909 141 HOH HOH . H 4 HOH B 110 910 81 HOH HOH . H 4 HOH B 111 911 91 HOH HOH . H 4 HOH B 112 912 160 HOH HOH . H 4 HOH B 113 913 341 HOH HOH . H 4 HOH B 114 914 179 HOH HOH . H 4 HOH B 115 915 272 HOH HOH . H 4 HOH B 116 916 303 HOH HOH . H 4 HOH B 117 917 66 HOH HOH . H 4 HOH B 118 918 211 HOH HOH . H 4 HOH B 119 919 242 HOH HOH . H 4 HOH B 120 920 145 HOH HOH . H 4 HOH B 121 921 292 HOH HOH . H 4 HOH B 122 922 213 HOH HOH . H 4 HOH B 123 923 229 HOH HOH . H 4 HOH B 124 924 232 HOH HOH . H 4 HOH B 125 925 159 HOH HOH . H 4 HOH B 126 926 148 HOH HOH . H 4 HOH B 127 927 245 HOH HOH . H 4 HOH B 128 928 96 HOH HOH . H 4 HOH B 129 929 70 HOH HOH . H 4 HOH B 130 930 28 HOH HOH . H 4 HOH B 131 931 119 HOH HOH . H 4 HOH B 132 932 20 HOH HOH . H 4 HOH B 133 933 88 HOH HOH . H 4 HOH B 134 934 185 HOH HOH . H 4 HOH B 135 935 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.871 _atom_site.Cartn_y 37.957 _atom_site.Cartn_z 50.137 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 59.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #