data_7UDX # _model_server_result.job_id nnM7K80dtBi4KgtcAYkwpA _model_server_result.datetime_utc '2024-11-08 09:50:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7udx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 7UDX # _exptl.entry_id 7UDX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UDX _cell.length_a 55.72 _cell.length_b 83.68 _cell.length_c 147.03 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UDX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 PISA pentameric 5 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,P,Q 1 1 F,G,H,I,J,R,S 2 1 K,L,M,N,O,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 150 n n C10 C9 OLC doub 151 n n C10 C11 OLC sing 152 n n C9 C8 OLC sing 153 n n C17 C16 OLC sing 154 z n C11 C12 OLC sing 155 n n C8 C7 OLC sing 156 n n C24 C22 OLC sing 157 n n C24 O25 OLC sing 158 n n C16 C15 OLC sing 159 n n C12 C13 OLC sing 160 n n C7 C6 OLC sing 161 n n C15 C14 OLC sing 162 n n C13 C14 OLC sing 163 n n C6 C5 OLC sing 164 n n C5 C4 OLC sing 165 n n C4 C3 OLC sing 166 n n C3 C2 OLC sing 167 n n C2 C1 OLC sing 168 n n C21 C22 OLC sing 169 n n C21 O20 OLC sing 170 n n C1 O19 OLC doub 171 n n C1 O20 OLC sing 172 n n C22 O23 OLC sing 173 n n C18 H18 OLC sing 174 n n C18 H18A OLC sing 175 n n C18 H18B OLC sing 176 n n C10 H10 OLC sing 177 n n C9 H9 OLC sing 178 n n C17 H17 OLC sing 179 n n C17 H17A OLC sing 180 n n C11 H11 OLC sing 181 n n C11 H11A OLC sing 182 n n C8 H8 OLC sing 183 n n C8 H8A OLC sing 184 n n C24 H24 OLC sing 185 n n C24 H24A OLC sing 186 n n C16 H16 OLC sing 187 n n C16 H16A OLC sing 188 n n C12 H12 OLC sing 189 n n C12 H12A OLC sing 190 n n C7 H7 OLC sing 191 n n C7 H7A OLC sing 192 n n C15 H15 OLC sing 193 n n C15 H15A OLC sing 194 n n C13 H13 OLC sing 195 n n C13 H13A OLC sing 196 n n C6 H6 OLC sing 197 n n C6 H6A OLC sing 198 n n C14 H14 OLC sing 199 n n C14 H14A OLC sing 200 n n C5 H5 OLC sing 201 n n C5 H5A OLC sing 202 n n C4 H4 OLC sing 203 n n C4 H4A OLC sing 204 n n C3 H3 OLC sing 205 n n C3 H3A OLC sing 206 n n C2 H2 OLC sing 207 n n C2 H2A OLC sing 208 n n C21 H21 OLC sing 209 n n C21 H21A OLC sing 210 n n C22 H22 OLC sing 211 n n O25 HO25 OLC sing 212 n n O23 HO23 OLC sing 213 n n # _atom_sites.entry_id 7UDX _atom_sites.fract_transf_matrix[1][1] 0.017947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006801 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code P 2 OLC C 1 101 101 OLC OLC . Q 3 HOH A 1 101 3 HOH HOH . Q 3 HOH A 2 102 2 HOH HOH . R 3 HOH H 1 101 5 HOH HOH . S 3 HOH I 1 101 6 HOH HOH . T 3 HOH K 1 101 4 HOH HOH . U 3 HOH L 1 101 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . P 2 -31.365 -17.76 27.15 1 48.16 ? C18 OLC 101 C 1 HETATM 2 C C10 OLC . . . P 2 -29.442 -25.871 25.74 1 47.87 ? C10 OLC 101 C 1 HETATM 3 C C9 OLC . . . P 2 -29.726 -26.927 26.464 1 48.3 ? C9 OLC 101 C 1 HETATM 4 C C17 OLC . . . P 2 -30.596 -19.057 27.066 1 48.17 ? C17 OLC 101 C 1 HETATM 5 C C11 OLC . . . P 2 -30.447 -25.175 24.875 1 47.16 ? C11 OLC 101 C 1 HETATM 6 C C8 OLC . . . P 2 -28.766 -27.796 27.216 1 49.03 ? C8 OLC 101 C 1 HETATM 7 C C16 OLC . . . P 2 -30.339 -19.544 25.66 1 47.4 ? C16 OLC 101 C 1 HETATM 8 C C12 OLC . . . P 2 -30.459 -23.683 24.992 1 47.12 ? C12 OLC 101 C 1 HETATM 9 C C7 OLC . . . P 2 -29.405 -29.024 27.797 1 49.37 ? C7 OLC 101 C 1 HETATM 10 C C15 OLC . . . P 2 -29.597 -20.857 25.629 1 47.58 ? C15 OLC 101 C 1 HETATM 11 C C13 OLC . . . P 2 -29.305 -22.978 24.296 1 47.04 ? C13 OLC 101 C 1 HETATM 12 C C6 OLC . . . P 2 -28.434 -29.973 28.488 1 50.16 ? C6 OLC 101 C 1 HETATM 13 C C14 OLC . . . P 2 -29.453 -21.475 24.262 1 46.94 ? C14 OLC 101 C 1 HETATM 14 C C5 OLC . . . P 2 -29.053 -31.27 28.954 1 50.57 ? C5 OLC 101 C 1 # _model_server_stats.io_time_ms 104 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #