data_7UDY # _model_server_result.job_id nwuocd_icx-smtmJWjqR_A _model_server_result.datetime_utc '2024-11-08 07:12:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7udy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 7UDY # _exptl.entry_id 7UDY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 306.438 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UDY _cell.length_a 56.385 _cell.length_b 84.837 _cell.length_c 149.557 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UDY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 PISA pentameric 5 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,P,Q 1 1 F,G,H,I,J,R 2 1 K,L,M,N,O 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 P N N ? 2 Q N N ? 2 R N N # _chem_comp.formula 'C16 H34 O5' _chem_comp.formula_weight 306.438 _chem_comp.id C8E _chem_comp.mon_nstd_flag . _chem_comp.name (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 C8E sing 54 n n C1 H11 C8E sing 55 n n C1 H12 C8E sing 56 n n C1 H13 C8E sing 57 n n C2 C3 C8E sing 58 n n C2 H21 C8E sing 59 n n C2 H22 C8E sing 60 n n C3 C4 C8E sing 61 n n C3 H31 C8E sing 62 n n C3 H32 C8E sing 63 n n C4 C5 C8E sing 64 n n C4 H41 C8E sing 65 n n C4 H42 C8E sing 66 n n C5 C6 C8E sing 67 n n C5 H51 C8E sing 68 n n C5 H52 C8E sing 69 n n C6 C7 C8E sing 70 n n C6 H61 C8E sing 71 n n C6 H62 C8E sing 72 n n C7 C8 C8E sing 73 n n C7 H71 C8E sing 74 n n C7 H72 C8E sing 75 n n C8 O9 C8E sing 76 n n C8 H81 C8E sing 77 n n C8 H82 C8E sing 78 n n O9 C10 C8E sing 79 n n C10 C11 C8E sing 80 n n C10 H101 C8E sing 81 n n C10 H102 C8E sing 82 n n C11 O12 C8E sing 83 n n C11 H111 C8E sing 84 n n C11 H112 C8E sing 85 n n O12 C13 C8E sing 86 n n C13 C14 C8E sing 87 n n C13 H131 C8E sing 88 n n C13 H132 C8E sing 89 n n C14 O15 C8E sing 90 n n C14 H141 C8E sing 91 n n C14 H142 C8E sing 92 n n O15 C16 C8E sing 93 n n C16 C17 C8E sing 94 n n C16 H161 C8E sing 95 n n C16 H162 C8E sing 96 n n C17 O18 C8E sing 97 n n C17 H171 C8E sing 98 n n C17 H172 C8E sing 99 n n O18 C19 C8E sing 100 n n C19 C20 C8E sing 101 n n C19 H191 C8E sing 102 n n C19 H192 C8E sing 103 n n C20 O21 C8E sing 104 n n C20 H201 C8E sing 105 n n C20 H202 C8E sing 106 n n O21 HO2 C8E sing 107 n n # _atom_sites.entry_id 7UDY _atom_sites.fract_transf_matrix[1][1] 0.017735 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006686 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code P 2 C8E C 1 101 102 C8E C8E . Q 2 C8E D 1 101 101 C8E C8E . R 2 C8E G 1 101 103 C8E C8E . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C8E . . . P 2 -18.727 20.024 -36.466 1 69.7 ? C1 C8E 101 C 1 HETATM 2 C C2 C8E . . . P 2 -19.09 18.551 -36.315 1 70.29 ? C2 C8E 101 C 1 HETATM 3 C C3 C8E . . . P 2 -20.596 18.371 -36.165 1 65.85 ? C3 C8E 101 C 1 HETATM 4 C C4 C8E . . . P 2 -20.993 18.21 -34.703 1 63.4 ? C4 C8E 101 C 1 HETATM 5 C C5 C8E . . . P 2 -21.582 16.825 -34.463 1 62.97 ? C5 C8E 101 C 1 HETATM 6 C C6 C8E . . . P 2 -23.104 16.872 -34.449 1 68.7 ? C6 C8E 101 C 1 HETATM 7 C C7 C8E . . . P 2 -23.677 15.825 -35.397 1 87.03 ? C7 C8E 101 C 1 HETATM 8 C C8 C8E . . . P 2 -23.21 14.423 -35.026 1 81.22 ? C8 C8E 101 C 1 HETATM 9 O O9 C8E . . . P 2 -23.974 13.473 -35.738 1 86.58 ? O9 C8E 101 C 1 HETATM 10 C C10 C8E . . . P 2 -23.336 13.071 -36.93 1 71.27 ? C10 C8E 101 C 1 HETATM 11 C C11 C8E . . . P 2 -24.227 12.085 -37.677 1 75.88 ? C11 C8E 101 C 1 HETATM 12 O O12 C8E . . . P 2 -23.433 11.215 -38.454 1 77.48 ? O12 C8E 101 C 1 HETATM 13 C C13 C8E . . . P 2 -23.663 9.865 -38.113 1 78.42 ? C13 C8E 101 C 1 HETATM 14 C C14 C8E . . . P 2 -22.445 9.298 -37.397 1 82.28 ? C14 C8E 101 C 1 HETATM 15 O O15 C8E . . . P 2 -22.285 7.937 -37.729 1 91.33 ? O15 C8E 101 C 1 HETATM 16 C C16 C8E . . . P 2 -22.461 7.096 -36.608 1 96.02 ? C16 C8E 101 C 1 HETATM 17 C C17 C8E . . . P 2 -21.411 7.399 -35.543 1 96.7 ? C17 C8E 101 C 1 HETATM 18 O O18 C8E . . . P 2 -20.417 6.398 -35.542 1 104.31 ? O18 C8E 101 C 1 HETATM 19 C C19 C8E . . . P 2 -19.604 6.447 -36.694 1 98.39 ? C19 C8E 101 C 1 HETATM 20 C C20 C8E . . . P 2 -18.171 6.775 -36.291 1 97.58 ? C20 C8E 101 C 1 HETATM 21 O O21 C8E . . . P 2 -17.333 5.683 -36.597 1 108.42 ? O21 C8E 101 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #