data_7UE7 # _model_server_result.job_id zRPdljXo846gt8iNpNhJ8w _model_server_result.datetime_utc '2025-02-24 12:07:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ue7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7UE7 # _exptl.entry_id 7UE7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7UE7 _cell.length_a 98.213 _cell.length_b 98.213 _cell.length_c 69.24 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UE7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -46.16 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O3G ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc2 B O1B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 C MG MG . A MG 502 1_555 G O HOH . A HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc4 C MG MG . A MG 502 1_555 G O HOH . A HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc5 C MG MG . A MG 502 1_555 G O HOH . A HOH 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc6 C MG MG . A MG 502 1_555 G O HOH . A HOH 662 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 19 n n PG O2G ANP sing 20 n n PG O3G ANP sing 21 n n PG N3B ANP sing 22 n n O2G HOG2 ANP sing 23 n n O3G HOG3 ANP sing 24 n n PB O1B ANP doub 25 n n PB O2B ANP sing 26 n n PB N3B ANP sing 27 n n PB O3A ANP sing 28 n n O2B HOB2 ANP sing 29 n n N3B HNB1 ANP sing 30 n n PA O1A ANP doub 31 n n PA O2A ANP sing 32 n n PA O3A ANP sing 33 n n PA O5' ANP sing 34 n n O2A HOA2 ANP sing 35 n n O5' C5' ANP sing 36 n n C5' C4' ANP sing 37 n n C5' "H5'1" ANP sing 38 n n C5' "H5'2" ANP sing 39 n n C4' O4' ANP sing 40 n n C4' C3' ANP sing 41 n n C4' H4' ANP sing 42 n n O4' C1' ANP sing 43 n n C3' O3' ANP sing 44 n n C3' C2' ANP sing 45 n n C3' H3' ANP sing 46 n n O3' HO3' ANP sing 47 n n C2' O2' ANP sing 48 n n C2' C1' ANP sing 49 n n C2' H2' ANP sing 50 n n O2' HO2' ANP sing 51 n n C1' N9 ANP sing 52 n n C1' H1' ANP sing 53 n n N9 C8 ANP sing 54 n y N9 C4 ANP sing 55 n y C8 N7 ANP doub 56 n y C8 H8 ANP sing 57 n n N7 C5 ANP sing 58 n y C5 C6 ANP sing 59 n y C5 C4 ANP doub 60 n y C6 N6 ANP sing 61 n n C6 N1 ANP doub 62 n y N6 HN61 ANP sing 63 n n N6 HN62 ANP sing 64 n n N1 C2 ANP sing 65 n y C2 N3 ANP doub 66 n y C2 H2 ANP sing 67 n n N3 C4 ANP sing 68 n y # _atom_sites.entry_id 7UE7 _atom_sites.fract_transf_matrix[1][1] 0.010182 _atom_sites.fract_transf_matrix[1][2] 0.005879 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 501 501 ANP ANP . C 3 MG A 1 502 1 MG MG . D 4 NE3 A 1 503 1 NE3 Y91 . E 5 EDO A 1 504 2 EDO EDO . F 6 ACT A 1 505 1 ACT ACT . G 7 HOH A 1 601 211 HOH HOH . G 7 HOH A 2 602 81 HOH HOH . G 7 HOH A 3 603 28 HOH HOH . G 7 HOH A 4 604 89 HOH HOH . G 7 HOH A 5 605 118 HOH HOH . G 7 HOH A 6 606 67 HOH HOH . G 7 HOH A 7 607 125 HOH HOH . G 7 HOH A 8 608 59 HOH HOH . G 7 HOH A 9 609 102 HOH HOH . G 7 HOH A 10 610 192 HOH HOH . G 7 HOH A 11 611 201 HOH HOH . G 7 HOH A 12 612 36 HOH HOH . G 7 HOH A 13 613 189 HOH HOH . G 7 HOH A 14 614 19 HOH HOH . G 7 HOH A 15 615 66 HOH HOH . G 7 HOH A 16 616 84 HOH HOH . G 7 HOH A 17 617 146 HOH HOH . G 7 HOH A 18 618 122 HOH HOH . G 7 HOH A 19 619 45 HOH HOH . G 7 HOH A 20 620 80 HOH HOH . G 7 HOH A 21 621 219 HOH HOH . G 7 HOH A 22 622 33 HOH HOH . G 7 HOH A 23 623 115 HOH HOH . G 7 HOH A 24 624 108 HOH HOH . G 7 HOH A 25 625 186 HOH HOH . G 7 HOH A 26 626 78 HOH HOH . G 7 HOH A 27 627 41 HOH HOH . G 7 HOH A 28 628 31 HOH HOH . G 7 HOH A 29 629 37 HOH HOH . G 7 HOH A 30 630 199 HOH HOH . G 7 HOH A 31 631 2 HOH HOH . G 7 HOH A 32 632 83 HOH HOH . G 7 HOH A 33 633 75 HOH HOH . G 7 HOH A 34 634 87 HOH HOH . G 7 HOH A 35 635 34 HOH HOH . G 7 HOH A 36 636 196 HOH HOH . G 7 HOH A 37 637 128 HOH HOH . G 7 HOH A 38 638 99 HOH HOH . G 7 HOH A 39 639 4 HOH HOH . G 7 HOH A 40 640 12 HOH HOH . G 7 HOH A 41 641 96 HOH HOH . G 7 HOH A 42 642 145 HOH HOH . G 7 HOH A 43 643 42 HOH HOH . G 7 HOH A 44 644 90 HOH HOH . G 7 HOH A 45 645 7 HOH HOH . G 7 HOH A 46 646 158 HOH HOH . G 7 HOH A 47 647 25 HOH HOH . G 7 HOH A 48 648 69 HOH HOH . G 7 HOH A 49 649 8 HOH HOH . G 7 HOH A 50 650 154 HOH HOH . G 7 HOH A 51 651 11 HOH HOH . G 7 HOH A 52 652 209 HOH HOH . G 7 HOH A 53 653 210 HOH HOH . G 7 HOH A 54 654 68 HOH HOH . G 7 HOH A 55 655 191 HOH HOH . G 7 HOH A 56 656 58 HOH HOH . G 7 HOH A 57 657 5 HOH HOH . G 7 HOH A 58 658 9 HOH HOH . G 7 HOH A 59 659 148 HOH HOH . G 7 HOH A 60 660 187 HOH HOH . G 7 HOH A 61 661 1 HOH HOH . G 7 HOH A 62 662 3 HOH HOH . G 7 HOH A 63 663 198 HOH HOH . G 7 HOH A 64 664 213 HOH HOH . G 7 HOH A 65 665 150 HOH HOH . G 7 HOH A 66 666 86 HOH HOH . G 7 HOH A 67 667 6 HOH HOH . G 7 HOH A 68 668 110 HOH HOH . G 7 HOH A 69 669 180 HOH HOH . G 7 HOH A 70 670 126 HOH HOH . G 7 HOH A 71 671 46 HOH HOH . G 7 HOH A 72 672 195 HOH HOH . G 7 HOH A 73 673 23 HOH HOH . G 7 HOH A 74 674 63 HOH HOH . G 7 HOH A 75 675 49 HOH HOH . G 7 HOH A 76 676 20 HOH HOH . G 7 HOH A 77 677 44 HOH HOH . G 7 HOH A 78 678 48 HOH HOH . G 7 HOH A 79 679 10 HOH HOH . G 7 HOH A 80 680 71 HOH HOH . G 7 HOH A 81 681 40 HOH HOH . G 7 HOH A 82 682 21 HOH HOH . G 7 HOH A 83 683 77 HOH HOH . G 7 HOH A 84 684 147 HOH HOH . G 7 HOH A 85 685 51 HOH HOH . G 7 HOH A 86 686 169 HOH HOH . G 7 HOH A 87 687 208 HOH HOH . G 7 HOH A 88 688 65 HOH HOH . G 7 HOH A 89 689 91 HOH HOH . G 7 HOH A 90 690 64 HOH HOH . G 7 HOH A 91 691 111 HOH HOH . G 7 HOH A 92 692 98 HOH HOH . G 7 HOH A 93 693 13 HOH HOH . G 7 HOH A 94 694 107 HOH HOH . G 7 HOH A 95 695 92 HOH HOH . G 7 HOH A 96 696 223 HOH HOH . G 7 HOH A 97 697 193 HOH HOH . G 7 HOH A 98 698 27 HOH HOH . G 7 HOH A 99 699 56 HOH HOH . G 7 HOH A 100 700 76 HOH HOH . G 7 HOH A 101 701 55 HOH HOH . G 7 HOH A 102 702 47 HOH HOH . G 7 HOH A 103 703 14 HOH HOH . G 7 HOH A 104 704 73 HOH HOH . G 7 HOH A 105 705 106 HOH HOH . G 7 HOH A 106 706 39 HOH HOH . G 7 HOH A 107 707 207 HOH HOH . G 7 HOH A 108 708 215 HOH HOH . G 7 HOH A 109 709 70 HOH HOH . G 7 HOH A 110 710 17 HOH HOH . G 7 HOH A 111 711 176 HOH HOH . G 7 HOH A 112 712 117 HOH HOH . G 7 HOH A 113 713 57 HOH HOH . G 7 HOH A 114 714 206 HOH HOH . G 7 HOH A 115 715 16 HOH HOH . G 7 HOH A 116 716 35 HOH HOH . G 7 HOH A 117 717 220 HOH HOH . G 7 HOH A 118 718 205 HOH HOH . G 7 HOH A 119 719 22 HOH HOH . G 7 HOH A 120 720 95 HOH HOH . G 7 HOH A 121 721 62 HOH HOH . G 7 HOH A 122 722 100 HOH HOH . G 7 HOH A 123 723 38 HOH HOH . G 7 HOH A 124 724 29 HOH HOH . G 7 HOH A 125 725 188 HOH HOH . G 7 HOH A 126 726 88 HOH HOH . G 7 HOH A 127 727 190 HOH HOH . G 7 HOH A 128 728 221 HOH HOH . G 7 HOH A 129 729 185 HOH HOH . G 7 HOH A 130 730 93 HOH HOH . G 7 HOH A 131 731 85 HOH HOH . G 7 HOH A 132 732 204 HOH HOH . G 7 HOH A 133 733 162 HOH HOH . G 7 HOH A 134 734 79 HOH HOH . G 7 HOH A 135 735 216 HOH HOH . G 7 HOH A 136 736 74 HOH HOH . G 7 HOH A 137 737 178 HOH HOH . G 7 HOH A 138 738 202 HOH HOH . G 7 HOH A 139 739 151 HOH HOH . G 7 HOH A 140 740 129 HOH HOH . G 7 HOH A 141 741 172 HOH HOH . G 7 HOH A 142 742 214 HOH HOH . G 7 HOH A 143 743 203 HOH HOH . G 7 HOH A 144 744 212 HOH HOH . G 7 HOH A 145 745 54 HOH HOH . G 7 HOH A 146 746 101 HOH HOH . G 7 HOH A 147 747 222 HOH HOH . G 7 HOH A 148 748 53 HOH HOH . G 7 HOH A 149 749 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . B 2 -26.598 17.632 -13.316 1 23.63 ? PG ANP 501 A 1 HETATM 2 O O1G ANP . . . B 2 -25.919 18.264 -14.508 1 31.93 ? O1G ANP 501 A 1 HETATM 3 O O2G ANP . . . B 2 -27.659 16.64 -13.835 1 25.6 ? O2G ANP 501 A 1 HETATM 4 O O3G ANP . . . B 2 -27.23 18.788 -12.457 1 25.13 ? O3G ANP 501 A 1 HETATM 5 P PB ANP . . . B 2 -25.32 16.516 -10.889 1 20.46 ? PB ANP 501 A 1 HETATM 6 O O1B ANP . . . B 2 -26.497 17.156 -10.202 1 22.37 ? O1B ANP 501 A 1 HETATM 7 O O2B ANP . . . B 2 -25.207 15.054 -10.523 1 19.81 ? O2B ANP 501 A 1 HETATM 8 N N3B ANP . . . B 2 -25.394 16.754 -12.533 1 22.31 ? N3B ANP 501 A 1 HETATM 9 P PA ANP . . . B 2 -23.453 17.737 -9.025 1 18.93 ? PA ANP 501 A 1 HETATM 10 O O1A ANP . . . B 2 -23.785 16.728 -7.973 1 19.57 ? O1A ANP 501 A 1 HETATM 11 O O2A ANP . . . B 2 -23.813 19.185 -8.74 1 19.2 ? O2A ANP 501 A 1 HETATM 12 O O3A ANP . . . B 2 -24.073 17.361 -10.462 1 18.78 ? O3A ANP 501 A 1 HETATM 13 O O5' ANP . . . B 2 -21.907 17.69 -9.356 1 17.84 ? O5' ANP 501 A 1 HETATM 14 C C5' ANP . . . B 2 -21.307 16.577 -10.035 1 20.63 ? C5' ANP 501 A 1 HETATM 15 C C4' ANP . . . B 2 -19.827 16.822 -10.163 1 19.69 ? C4' ANP 501 A 1 HETATM 16 O O4' ANP . . . B 2 -19.241 16.91 -8.85 1 20.88 ? O4' ANP 501 A 1 HETATM 17 C C3' ANP . . . B 2 -19.051 15.719 -10.868 1 19.53 ? C3' ANP 501 A 1 HETATM 18 O O3' ANP . . . B 2 -19.056 15.996 -12.269 1 20.91 ? O3' ANP 501 A 1 HETATM 19 C C2' ANP . . . B 2 -17.644 15.868 -10.28 1 22.02 ? C2' ANP 501 A 1 HETATM 20 O O2' ANP . . . B 2 -16.865 16.85 -10.958 1 21.44 ? O2' ANP 501 A 1 HETATM 21 C C1' ANP . . . B 2 -17.924 16.385 -8.863 1 18.36 ? C1' ANP 501 A 1 HETATM 22 N N9 ANP . . . B 2 -17.841 15.405 -7.78 1 19.9 ? N9 ANP 501 A 1 HETATM 23 C C8 ANP . . . B 2 -17.589 15.729 -6.473 1 25.24 ? C8 ANP 501 A 1 HETATM 24 N N7 ANP . . . B 2 -17.618 14.705 -5.662 1 24.17 ? N7 ANP 501 A 1 HETATM 25 C C5 ANP . . . B 2 -17.933 13.63 -6.477 1 21.17 ? C5 ANP 501 A 1 HETATM 26 C C6 ANP . . . B 2 -18.095 12.261 -6.226 1 24.35 ? C6 ANP 501 A 1 HETATM 27 N N6 ANP . . . B 2 -17.977 11.712 -5.01 1 29.92 ? N6 ANP 501 A 1 HETATM 28 N N1 ANP . . . B 2 -18.397 11.459 -7.272 1 26.48 ? N1 ANP 501 A 1 HETATM 29 C C2 ANP . . . B 2 -18.519 12.005 -8.486 1 25.59 ? C2 ANP 501 A 1 HETATM 30 N N3 ANP . . . B 2 -18.38 13.282 -8.846 1 24.35 ? N3 ANP 501 A 1 HETATM 31 C C4 ANP . . . B 2 -18.064 14.053 -7.796 1 20.14 ? C4 ANP 501 A 1 # _model_server_stats.io_time_ms 85 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #