data_7UEP
#
_model_server_result.job_id            SW3hzmqfqjifHo6ZccdXtg 
_model_server_result.datetime_utc      '2024-10-12 06:22:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7uep 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    7UEP 
#
_exptl.entry_id    7UEP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7UEP 
_cell.length_a            98.833 
_cell.length_b            98.833 
_cell.length_c            68.994 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UEP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -45.996 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O3G ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc2 B O1B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc3 C MG MG . A MG 502 1_555 F O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc4 C MG MG . A MG 502 1_555 F O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc5 C MG MG . A MG 502 1_555 F O HOH . A HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? 
metalc ? metalc6 C MG MG . A MG 502 1_555 F O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     7UEP 
_atom_sites.fract_transf_matrix[1][1]    0.010118 
_atom_sites.fract_transf_matrix[1][2]    0.005842 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011683 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014494 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 501 501 ANP ANP . 
C 3 MG A 1 502 1 MG MG . 
D 4 EDO A 1 503 1 EDO EDO . 
E 5 Y93 A 1 504 1 Y93 Y93 . 
F 6 HOH A 1 601 17 HOH HOH . 
F 6 HOH A 2 602 68 HOH HOH . 
F 6 HOH A 3 603 40 HOH HOH . 
F 6 HOH A 4 604 101 HOH HOH . 
F 6 HOH A 5 605 34 HOH HOH . 
F 6 HOH A 6 606 43 HOH HOH . 
F 6 HOH A 7 607 35 HOH HOH . 
F 6 HOH A 8 608 86 HOH HOH . 
F 6 HOH A 9 609 13 HOH HOH . 
F 6 HOH A 10 610 80 HOH HOH . 
F 6 HOH A 11 611 18 HOH HOH . 
F 6 HOH A 12 612 48 HOH HOH . 
F 6 HOH A 13 613 1 HOH HOH . 
F 6 HOH A 14 614 7 HOH HOH . 
F 6 HOH A 15 615 3 HOH HOH . 
F 6 HOH A 16 616 9 HOH HOH . 
F 6 HOH A 17 617 4 HOH HOH . 
F 6 HOH A 18 618 45 HOH HOH . 
F 6 HOH A 19 619 23 HOH HOH . 
F 6 HOH A 20 620 55 HOH HOH . 
F 6 HOH A 21 621 94 HOH HOH . 
F 6 HOH A 22 622 38 HOH HOH . 
F 6 HOH A 23 623 100 HOH HOH . 
F 6 HOH A 24 624 102 HOH HOH . 
F 6 HOH A 25 625 6 HOH HOH . 
F 6 HOH A 26 626 78 HOH HOH . 
F 6 HOH A 27 627 32 HOH HOH . 
F 6 HOH A 28 628 5 HOH HOH . 
F 6 HOH A 29 629 85 HOH HOH . 
F 6 HOH A 30 630 19 HOH HOH . 
F 6 HOH A 31 631 24 HOH HOH . 
F 6 HOH A 32 632 29 HOH HOH . 
F 6 HOH A 33 633 10 HOH HOH . 
F 6 HOH A 34 634 51 HOH HOH . 
F 6 HOH A 35 635 83 HOH HOH . 
F 6 HOH A 36 636 58 HOH HOH . 
F 6 HOH A 37 637 33 HOH HOH . 
F 6 HOH A 38 638 27 HOH HOH . 
F 6 HOH A 39 639 36 HOH HOH . 
F 6 HOH A 40 640 31 HOH HOH . 
F 6 HOH A 41 641 54 HOH HOH . 
F 6 HOH A 42 642 16 HOH HOH . 
F 6 HOH A 43 643 14 HOH HOH . 
F 6 HOH A 44 644 99 HOH HOH . 
F 6 HOH A 45 645 37 HOH HOH . 
F 6 HOH A 46 646 21 HOH HOH . 
F 6 HOH A 47 647 41 HOH HOH . 
F 6 HOH A 48 648 97 HOH HOH . 
F 6 HOH A 49 649 75 HOH HOH . 
F 6 HOH A 50 650 60 HOH HOH . 
F 6 HOH A 51 651 72 HOH HOH . 
F 6 HOH A 52 652 30 HOH HOH . 
F 6 HOH A 53 653 28 HOH HOH . 
F 6 HOH A 54 654 87 HOH HOH . 
F 6 HOH A 55 655 109 HOH HOH . 
F 6 HOH A 56 656 2 HOH HOH . 
F 6 HOH A 57 657 53 HOH HOH . 
F 6 HOH A 58 658 105 HOH HOH . 
F 6 HOH A 59 659 42 HOH HOH . 
F 6 HOH A 60 660 96 HOH HOH . 
F 6 HOH A 61 661 107 HOH HOH . 
F 6 HOH A 62 662 52 HOH HOH . 
F 6 HOH A 63 663 62 HOH HOH . 
F 6 HOH A 64 664 50 HOH HOH . 
F 6 HOH A 65 665 98 HOH HOH . 
F 6 HOH A 66 666 15 HOH HOH . 
F 6 HOH A 67 667 25 HOH HOH . 
F 6 HOH A 68 668 26 HOH HOH . 
F 6 HOH A 69 669 46 HOH HOH . 
F 6 HOH A 70 670 49 HOH HOH . 
F 6 HOH A 71 671 108 HOH HOH . 
F 6 HOH A 72 672 47 HOH HOH . 
F 6 HOH A 73 673 56 HOH HOH . 
F 6 HOH A 74 674 106 HOH HOH . 
F 6 HOH A 75 675 8 HOH HOH . 
F 6 HOH A 76 676 103 HOH HOH . 
F 6 HOH A 77 677 81 HOH HOH . 
F 6 HOH A 78 678 57 HOH HOH . 
F 6 HOH A 79 679 93 HOH HOH . 
F 6 HOH A 80 680 70 HOH HOH . 
F 6 HOH A 81 681 110 HOH HOH . 
F 6 HOH A 82 682 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . B 2 -26.544 17.64 -13.281 1 38.34 ? PG ANP 501 A 1 
HETATM 2 O O1G ANP . . . B 2 -25.835 18.321 -14.469 1 40.05 ? O1G ANP 501 A 1 
HETATM 3 O O2G ANP . . . B 2 -27.608 16.677 -13.911 1 35.47 ? O2G ANP 501 A 1 
HETATM 4 O O3G ANP . . . B 2 -27.214 18.802 -12.462 1 36.35 ? O3G ANP 501 A 1 
HETATM 5 P PB ANP . . . B 2 -25.325 16.525 -10.846 1 30.51 ? PB ANP 501 A 1 
HETATM 6 O O1B ANP . . . B 2 -26.558 17.13 -10.206 1 31.08 ? O1B ANP 501 A 1 
HETATM 7 O O2B ANP . . . B 2 -25.125 15.063 -10.434 1 27.94 ? O2B ANP 501 A 1 
HETATM 8 N N3B ANP . . . B 2 -25.362 16.724 -12.479 1 30.18 ? N3B ANP 501 A 1 
HETATM 9 P PA ANP . . . B 2 -23.455 17.714 -9.046 1 29.23 ? PA ANP 501 A 1 
HETATM 10 O O1A ANP . . . B 2 -23.853 16.77 -7.969 1 30.69 ? O1A ANP 501 A 1 
HETATM 11 O O2A ANP . . . B 2 -23.789 19.144 -8.616 1 28.02 ? O2A ANP 501 A 1 
HETATM 12 O O3A ANP . . . B 2 -24.072 17.402 -10.448 1 27.07 ? O3A ANP 501 A 1 
HETATM 13 O O5' ANP . . . B 2 -21.9 17.632 -9.322 1 25.73 ? O5' ANP 501 A 1 
HETATM 14 C C5' ANP . . . B 2 -21.286 16.466 -9.878 1 27.61 ? C5' ANP 501 A 1 
HETATM 15 C C4' ANP . . . B 2 -19.817 16.731 -10.069 1 31.04 ? C4' ANP 501 A 1 
HETATM 16 O O4' ANP . . . B 2 -19.184 16.915 -8.789 1 31.73 ? O4' ANP 501 A 1 
HETATM 17 C C3' ANP . . . B 2 -19.059 15.597 -10.745 1 25.76 ? C3' ANP 501 A 1 
HETATM 18 O O3' ANP . . . B 2 -19.085 15.855 -12.144 1 26.46 ? O3' ANP 501 A 1 
HETATM 19 C C2' ANP . . . B 2 -17.641 15.749 -10.179 1 31.15 ? C2' ANP 501 A 1 
HETATM 20 O O2' ANP . . . B 2 -16.885 16.717 -10.885 1 30.2 ? O2' ANP 501 A 1 
HETATM 21 C C1' ANP . . . B 2 -17.897 16.329 -8.782 1 30.53 ? C1' ANP 501 A 1 
HETATM 22 N N9 ANP . . . B 2 -17.851 15.374 -7.686 1 28.22 ? N9 ANP 501 A 1 
HETATM 23 C C8 ANP . . . B 2 -17.576 15.692 -6.378 1 27.26 ? C8 ANP 501 A 1 
HETATM 24 N N7 ANP . . . B 2 -17.62 14.67 -5.565 1 31.75 ? N7 ANP 501 A 1 
HETATM 25 C C5 ANP . . . B 2 -17.947 13.604 -6.383 1 29.96 ? C5 ANP 501 A 1 
HETATM 26 C C6 ANP . . . B 2 -18.139 12.236 -6.128 1 34.59 ? C6 ANP 501 A 1 
HETATM 27 N N6 ANP . . . B 2 -18.028 11.688 -4.913 1 36.85 ? N6 ANP 501 A 1 
HETATM 28 N N1 ANP . . . B 2 -18.449 11.438 -7.173 1 33.59 ? N1 ANP 501 A 1 
HETATM 29 C C2 ANP . . . B 2 -18.571 11.982 -8.386 1 36.8 ? C2 ANP 501 A 1 
HETATM 30 N N3 ANP . . . B 2 -18.411 13.256 -8.751 1 33.48 ? N3 ANP 501 A 1 
HETATM 31 C C4 ANP . . . B 2 -18.095 14.024 -7.699 1 27.67 ? C4 ANP 501 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#