data_7UF5 # _model_server_result.job_id QWgQ-iMbmTeXR0SKaIvpGw _model_server_result.datetime_utc '2024-10-17 19:31:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7uf5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 7UF5 # _exptl.entry_id 7UF5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UF5 _cell.length_a 60.912 _cell.length_b 78.99 _cell.length_c 90.367 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UF5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 45.1835 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 39 A GLU 39 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc2 A ND1 HIS 154 A HIS 154 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 B O08 N52 . A N52 301 1_555 E MN MN . A MN 304 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc4 B O10 N52 . A N52 301 1_555 E MN MN . A MN 304 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.76 ? metalc ? metalc5 B O14 N52 . A N52 301 1_555 E MN MN . A MN 304 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc6 C O09 N4O . A N4O 302 1_555 E MN MN . A MN 304 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc7 C O11 N4O . A N4O 302 1_555 E MN MN . A MN 304 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc8 E MN MN . A MN 304 1_555 F O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7UF5 _atom_sites.fract_transf_matrix[1][1] 0.016417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011066 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 N52 A 1 301 1 N52 IN2 . C 3 N4O A 1 302 1 N4O DBP . D 4 FMT A 1 303 1 FMT FMT . E 5 MN A 1 304 1 MN MN . F 6 HOH A 1 401 64 HOH HOH . F 6 HOH A 2 402 1 HOH HOH . F 6 HOH A 3 403 3 HOH HOH . F 6 HOH A 4 404 17 HOH HOH . F 6 HOH A 5 405 32 HOH HOH . F 6 HOH A 6 406 15 HOH HOH . F 6 HOH A 7 407 39 HOH HOH . F 6 HOH A 8 408 2 HOH HOH . F 6 HOH A 9 409 8 HOH HOH . F 6 HOH A 10 410 19 HOH HOH . F 6 HOH A 11 411 4 HOH HOH . F 6 HOH A 12 412 29 HOH HOH . F 6 HOH A 13 413 7 HOH HOH . F 6 HOH A 14 414 16 HOH HOH . F 6 HOH A 15 415 25 HOH HOH . F 6 HOH A 16 416 18 HOH HOH . F 6 HOH A 17 417 22 HOH HOH . F 6 HOH A 18 418 60 HOH HOH . F 6 HOH A 19 419 62 HOH HOH . F 6 HOH A 20 420 6 HOH HOH . F 6 HOH A 21 421 21 HOH HOH . F 6 HOH A 22 422 34 HOH HOH . F 6 HOH A 23 423 45 HOH HOH . F 6 HOH A 24 424 63 HOH HOH . F 6 HOH A 25 425 9 HOH HOH . F 6 HOH A 26 426 42 HOH HOH . F 6 HOH A 27 427 41 HOH HOH . F 6 HOH A 28 428 27 HOH HOH . F 6 HOH A 29 429 23 HOH HOH . F 6 HOH A 30 430 5 HOH HOH . F 6 HOH A 31 431 35 HOH HOH . F 6 HOH A 32 432 10 HOH HOH . F 6 HOH A 33 433 12 HOH HOH . F 6 HOH A 34 434 43 HOH HOH . F 6 HOH A 35 435 13 HOH HOH . F 6 HOH A 36 436 31 HOH HOH . F 6 HOH A 37 437 36 HOH HOH . F 6 HOH A 38 438 50 HOH HOH . F 6 HOH A 39 439 14 HOH HOH . F 6 HOH A 40 440 54 HOH HOH . F 6 HOH A 41 441 44 HOH HOH . F 6 HOH A 42 442 26 HOH HOH . F 6 HOH A 43 443 30 HOH HOH . F 6 HOH A 44 444 40 HOH HOH . F 6 HOH A 45 445 11 HOH HOH . F 6 HOH A 46 446 38 HOH HOH . F 6 HOH A 47 447 20 HOH HOH . F 6 HOH A 48 448 61 HOH HOH . F 6 HOH A 49 449 28 HOH HOH . F 6 HOH A 50 450 53 HOH HOH . F 6 HOH A 51 451 37 HOH HOH . F 6 HOH A 52 452 59 HOH HOH . F 6 HOH A 53 453 57 HOH HOH . F 6 HOH A 54 454 56 HOH HOH . F 6 HOH A 55 455 52 HOH HOH . F 6 HOH A 56 456 33 HOH HOH . F 6 HOH A 57 457 55 HOH HOH . F 6 HOH A 58 458 51 HOH HOH . F 6 HOH A 59 459 47 HOH HOH . F 6 HOH A 60 460 58 HOH HOH . F 6 HOH A 61 461 46 HOH HOH . F 6 HOH A 62 462 24 HOH HOH . F 6 HOH A 63 463 49 HOH HOH . F 6 HOH A 64 464 48 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -5.806 _atom_site.Cartn_y -7.198 _atom_site.Cartn_z 10.147 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 304 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #