data_7UFA
#
_model_server_result.job_id            clAEa9m1IAGZ2uFtnJvczQ 
_model_server_result.datetime_utc      '2024-11-28 02:14:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ufa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    7UFA 
#
_exptl.entry_id    7UFA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              533.725 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'tert-butyl [(2S)-1-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-4-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7UFA 
_cell.length_a            76.58 
_cell.length_b            101.73 
_cell.length_c            125.51 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UFA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D 1 1 
A,B,C,D 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N29 NI6 . A NI6 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
#
_chem_comp.formula           'C31 H39 N3 O3 S' 
_chem_comp.formula_weight    533.725 
_chem_comp.id                NI6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'tert-butyl [(2S)-1-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-4-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]carbamate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C03 C02 NI6 sing 319 n n 
C01 C02 NI6 sing 320 n n 
C36 C37 NI6 doub 321 n y 
C36 C35 NI6 sing 322 n y 
C37 C38 NI6 sing 323 n y 
C02 C04 NI6 sing 324 n n 
C02 O05 NI6 sing 325 n n 
C30 C31 NI6 doub 326 n y 
C30 N29 NI6 sing 327 n y 
C31 C26 NI6 sing 328 n y 
O07 C06 NI6 doub 329 n n 
C38 C33 NI6 doub 330 n y 
C35 C34 NI6 doub 331 n y 
N29 C28 NI6 doub 332 n y 
O05 C06 NI6 sing 333 n n 
C26 C25 NI6 sing 334 n n 
C26 C27 NI6 doub 335 n y 
C06 N08 NI6 sing 336 n n 
C25 C24 NI6 sing 337 n n 
C24 C23 NI6 sing 338 n n 
C34 C33 NI6 sing 339 n y 
C33 C32 NI6 sing 340 n n 
C28 C27 NI6 sing 341 n y 
N08 C09 NI6 sing 342 n n 
C32 C09 NI6 sing 343 n n 
C23 N22 NI6 sing 344 n n 
C09 C10 NI6 sing 345 n n 
N22 C20 NI6 sing 346 n n 
C10 S11 NI6 sing 347 n n 
C20 C12 NI6 sing 348 n n 
C20 O21 NI6 doub 349 n n 
S11 C12 NI6 sing 350 n n 
C12 C13 NI6 sing 351 n n 
C15 C16 NI6 doub 352 n y 
C15 C14 NI6 sing 353 n y 
C16 C17 NI6 sing 354 n y 
C13 C14 NI6 sing 355 n n 
C14 C19 NI6 doub 356 n y 
C17 C18 NI6 doub 357 n y 
C19 C18 NI6 sing 358 n y 
C10 H1 NI6 sing 359 n n 
C10 H2 NI6 sing 360 n n 
C13 H3 NI6 sing 361 n n 
C13 H4 NI6 sing 362 n n 
C15 H5 NI6 sing 363 n n 
C17 H6 NI6 sing 364 n n 
C24 H7 NI6 sing 365 n n 
C24 H8 NI6 sing 366 n n 
C28 H9 NI6 sing 367 n n 
C01 H10 NI6 sing 368 n n 
C01 H11 NI6 sing 369 n n 
C01 H12 NI6 sing 370 n n 
C03 H13 NI6 sing 371 n n 
C03 H14 NI6 sing 372 n n 
C03 H15 NI6 sing 373 n n 
C04 H16 NI6 sing 374 n n 
C04 H17 NI6 sing 375 n n 
C04 H18 NI6 sing 376 n n 
C09 H19 NI6 sing 377 n n 
C12 H20 NI6 sing 378 n n 
C16 H21 NI6 sing 379 n n 
C18 H22 NI6 sing 380 n n 
C19 H23 NI6 sing 381 n n 
C23 H24 NI6 sing 382 n n 
C25 H25 NI6 sing 383 n n 
C25 H26 NI6 sing 384 n n 
C27 H27 NI6 sing 385 n n 
C30 H28 NI6 sing 386 n n 
C31 H29 NI6 sing 387 n n 
C32 H30 NI6 sing 388 n n 
C32 H31 NI6 sing 389 n n 
C34 H32 NI6 sing 390 n n 
C35 H33 NI6 sing 391 n n 
C36 H34 NI6 sing 392 n n 
C37 H35 NI6 sing 393 n n 
C38 H36 NI6 sing 394 n n 
N08 H37 NI6 sing 395 n n 
C23 H38 NI6 sing 396 n n 
N22 H39 NI6 sing 397 n n 
#
_atom_sites.entry_id                     7UFA 
_atom_sites.fract_transf_matrix[1][1]    0.013058 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00983 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007967 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 NI6 A 1 602 700 NI6 LIG . 
D 4 HOH A 1 701 3 HOH HOH . 
D 4 HOH A 2 702 2 HOH HOH . 
D 4 HOH A 3 703 4 HOH HOH . 
D 4 HOH A 4 704 1 HOH HOH . 
D 4 HOH A 5 705 5 HOH HOH . 
D 4 HOH A 6 706 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 NI6 . . . C 3 -22.725 -16.318 -5.792 1 139.98 ? C10 NI6 602 A 1 
HETATM 2 C C13 NI6 . . . C 3 -23.964 -19.638 -3.381 1 146.83 ? C13 NI6 602 A 1 
HETATM 3 C C15 NI6 . . . C 3 -25.989 -21.131 -3.959 1 140.97 ? C15 NI6 602 A 1 
HETATM 4 C C17 NI6 . . . C 3 -26.54 -23.156 -2.749 1 149.22 ? C17 NI6 602 A 1 
HETATM 5 C C20 NI6 . . . C 3 -22.176 -19.435 -5.23 1 144.87 ? C20 NI6 602 A 1 
HETATM 6 C C24 NI6 . . . C 3 -22.389 -20.677 -8.992 1 86 ? C24 NI6 602 A 1 
HETATM 7 C C26 NI6 . . . C 3 -20.386 -22.32 -9.53 1 71.26 ? C26 NI6 602 A 1 
HETATM 8 C C28 NI6 . . . C 3 -18.168 -22.548 -8.546 1 69.13 ? C28 NI6 602 A 1 
HETATM 9 C C01 NI6 . . . C 3 -25.549 -17.007 -11.394 1 156.97 ? C01 NI6 602 A 1 
HETATM 10 C C02 NI6 . . . C 3 -25.509 -15.53 -10.969 1 157.33 ? C02 NI6 602 A 1 
HETATM 11 C C03 NI6 . . . C 3 -24.804 -14.655 -12.031 1 165.57 ? C03 NI6 602 A 1 
HETATM 12 C C04 NI6 . . . C 3 -26.969 -15.019 -10.816 1 156.68 ? C04 NI6 602 A 1 
HETATM 13 C C06 NI6 . . . C 3 -23.653 -16.143 -9.412 1 139.37 ? C06 NI6 602 A 1 
HETATM 14 C C09 NI6 . . . C 3 -22.301 -16.762 -7.247 1 123.14 ? C09 NI6 602 A 1 
HETATM 15 C C12 NI6 . . . C 3 -23.67 -19.225 -4.869 1 148.6 ? C12 NI6 602 A 1 
HETATM 16 C C14 NI6 . . . C 3 -24.86 -20.877 -3.147 1 148.88 ? C14 NI6 602 A 1 
HETATM 17 C C16 NI6 . . . C 3 -26.815 -22.248 -3.77 1 145.04 ? C16 NI6 602 A 1 
HETATM 18 C C18 NI6 . . . C 3 -25.43 -22.933 -1.934 1 158.5 ? C18 NI6 602 A 1 
HETATM 19 C C19 NI6 . . . C 3 -24.609 -21.812 -2.129 1 161.71 ? C19 NI6 602 A 1 
HETATM 20 C C23 NI6 . . . C 3 -22.87 -20.492 -7.484 1 100.66 ? C23 NI6 602 A 1 
HETATM 21 C C25 NI6 . . . C 3 -21.907 -22.107 -9.403 1 80.99 ? C25 NI6 602 A 1 
HETATM 22 C C27 NI6 . . . C 3 -19.551 -22.352 -8.401 1 64.24 ? C27 NI6 602 A 1 
HETATM 23 C C30 NI6 . . . C 3 -18.363 -22.691 -10.847 1 69.27 ? C30 NI6 602 A 1 
HETATM 24 C C31 NI6 . . . C 3 -19.75 -22.497 -10.781 1 56.98 ? C31 NI6 602 A 1 
HETATM 25 C C32 NI6 . . . C 3 -21.069 -15.933 -7.78 1 88.56 ? C32 NI6 602 A 1 
HETATM 26 C C33 NI6 . . . C 3 -20.235 -16.599 -8.885 1 95.44 ? C33 NI6 602 A 1 
HETATM 27 C C34 NI6 . . . C 3 -19.938 -17.985 -8.908 1 95.08 ? C34 NI6 602 A 1 
HETATM 28 C C35 NI6 . . . C 3 -19.178 -18.562 -9.936 1 82.24 ? C35 NI6 602 A 1 
HETATM 29 C C36 NI6 . . . C 3 -18.694 -17.77 -10.981 1 89.59 ? C36 NI6 602 A 1 
HETATM 30 C C37 NI6 . . . C 3 -18.978 -16.405 -10.981 1 102.17 ? C37 NI6 602 A 1 
HETATM 31 C C38 NI6 . . . C 3 -19.734 -15.846 -9.951 1 83.23 ? C38 NI6 602 A 1 
HETATM 32 N N08 NI6 . . . C 3 -23.515 -16.76 -8.15 1 123.13 ? N08 NI6 602 A 1 
HETATM 33 N N22 NI6 . . . C 3 -21.853 -20.046 -6.521 1 120.98 ? N22 NI6 602 A 1 
HETATM 34 N N29 NI6 . . . C 3 -17.567 -22.718 -9.749 1 50.83 ? N29 NI6 602 A 1 
HETATM 35 O O05 NI6 . . . C 3 -24.772 -15.344 -9.728 1 158.27 ? O05 NI6 602 A 1 
HETATM 36 O O07 NI6 . . . C 3 -22.794 -16.305 -10.272 1 141.63 ? O07 NI6 602 A 1 
HETATM 37 O O21 NI6 . . . C 3 -21.327 -19.113 -4.482 1 148.01 ? O21 NI6 602 A 1 
HETATM 38 S S11 NI6 . . . C 3 -24.101 -17.39 -5.095 1 177 ? S11 NI6 602 A 1 
#
_model_server_stats.io_time_ms              140 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           674 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           38 
#