data_7UFF
#
_model_server_result.job_id            0I5NQrBrY9DkWBd6wD1o3A 
_model_server_result.datetime_utc      '2024-10-11 02:19:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7uff 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":601}' 
#
_entry.id    7UFF 
#
_exptl.entry_id    7UFF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          125.2 
_cell.angle_gamma         90 
_cell.entry_id            7UFF 
_cell.length_a            156.618 
_cell.length_b            97.879 
_cell.length_c            95.149 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UFF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_756 -x+5/2,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 336.698042 48.9395 77.75052 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 C FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc2 C FE HEM . A HEM 601 1_555 E N29 NYF . A NYF 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc3 B SG CYS 422 B CYS 442 1_555 F FE HEM . B HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc4 F FE HEM . B HEM 601 1_555 G N29 NYF . B NYF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     7UFF 
_atom_sites.fract_transf_matrix[1][1]    0.006385 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004504 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010217 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 601 500 HEM HEM . 
D 3 PO4 A 1 602 501 PO4 PO4 . 
E 4 NYF A 1 603 700 NYF 138 . 
F 2 HEM B 1 601 500 HEM HEM . 
G 4 NYF B 1 602 700 NYF 138 . 
H 5 HOH A 1 701 10 HOH HOH . 
H 5 HOH A 2 702 13 HOH HOH . 
H 5 HOH A 3 703 12 HOH HOH . 
H 5 HOH A 4 704 6 HOH HOH . 
H 5 HOH A 5 705 2 HOH HOH . 
H 5 HOH A 6 706 7 HOH HOH . 
H 5 HOH A 7 707 9 HOH HOH . 
H 5 HOH A 8 708 11 HOH HOH . 
H 5 HOH A 9 709 3 HOH HOH . 
H 5 HOH A 10 710 8 HOH HOH . 
H 5 HOH A 11 711 4 HOH HOH . 
H 5 HOH A 12 712 5 HOH HOH . 
H 5 HOH A 13 713 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . F 2 178.291 -26.179 51.024 1 62.93 ? CHA HEM 601 B 1 
HETATM 2 C CHB HEM . . . F 2 182.304 -24.132 49.197 1 60.13 ? CHB HEM 601 B 1 
HETATM 3 C CHC HEM . . . F 2 180.709 -19.773 50.609 1 72.17 ? CHC HEM 601 B 1 
HETATM 4 C CHD HEM . . . F 2 176.597 -21.787 52.232 1 61.89 ? CHD HEM 601 B 1 
HETATM 5 C C1A HEM . . . F 2 179.506 -26.01 50.395 1 61.46 ? C1A HEM 601 B 1 
HETATM 6 C C2A HEM . . . F 2 180.301 -27.052 49.778 1 64.74 ? C2A HEM 601 B 1 
HETATM 7 C C3A HEM . . . F 2 181.406 -26.489 49.278 1 72.22 ? C3A HEM 601 B 1 
HETATM 8 C C4A HEM . . . F 2 181.354 -25.067 49.552 1 68.1 ? C4A HEM 601 B 1 
HETATM 9 C CMA HEM . . . F 2 182.544 -27.218 48.532 1 64.35 ? CMA HEM 601 B 1 
HETATM 10 C CAA HEM . . . F 2 179.932 -28.552 49.726 1 54.47 ? CAA HEM 601 B 1 
HETATM 11 C CBA HEM . . . F 2 179.444 -28.929 48.332 1 72.39 ? CBA HEM 601 B 1 
HETATM 12 C CGA HEM . . . F 2 179.231 -30.417 48.257 1 79.28 ? CGA HEM 601 B 1 
HETATM 13 O O1A HEM . . . F 2 178.967 -30.929 47.139 1 86.46 ? O1A HEM 601 B 1 
HETATM 14 O O2A HEM . . . F 2 179.329 -31.092 49.314 1 70.22 ? O2A HEM 601 B 1 
HETATM 15 C C1B HEM . . . F 2 182.218 -22.769 49.398 1 65.61 ? C1B HEM 601 B 1 
HETATM 16 C C2B HEM . . . F 2 183.174 -21.777 48.946 1 68.65 ? C2B HEM 601 B 1 
HETATM 17 C C3B HEM . . . F 2 182.733 -20.565 49.338 1 74.02 ? C3B HEM 601 B 1 
HETATM 18 C C4B HEM . . . F 2 181.484 -20.765 50.047 1 71.05 ? C4B HEM 601 B 1 
HETATM 19 C CMB HEM . . . F 2 184.456 -22.133 48.156 1 69.02 ? CMB HEM 601 B 1 
HETATM 20 C CAB HEM . . . F 2 183.35 -19.156 49.129 1 88.75 ? CAB HEM 601 B 1 
HETATM 21 C CBB HEM . . . F 2 184.471 -18.902 48.443 1 99.5 ? CBB HEM 601 B 1 
HETATM 22 C C1C HEM . . . F 2 179.438 -19.922 51.123 1 71.34 ? C1C HEM 601 B 1 
HETATM 23 C C2C HEM . . . F 2 178.548 -18.851 51.516 1 70.97 ? C2C HEM 601 B 1 
HETATM 24 C C3C HEM . . . F 2 177.41 -19.387 51.965 1 65.92 ? C3C HEM 601 B 1 
HETATM 25 C C4C HEM . . . F 2 177.534 -20.836 51.875 1 56.72 ? C4C HEM 601 B 1 
HETATM 26 C CMC HEM . . . F 2 178.861 -17.342 51.43 1 63.42 ? CMC HEM 601 B 1 
HETATM 27 C CAC HEM . . . F 2 176.212 -18.551 52.478 1 62.44 ? CAC HEM 601 B 1 
HETATM 28 C CBC HEM . . . F 2 175.085 -19.102 52.938 1 71.64 ? CBC HEM 601 B 1 
HETATM 29 C C1D HEM . . . F 2 176.707 -23.153 52.078 1 67.32 ? C1D HEM 601 B 1 
HETATM 30 C C2D HEM . . . F 2 175.747 -24.145 52.522 1 74.25 ? C2D HEM 601 B 1 
HETATM 31 C C3D HEM . . . F 2 176.215 -25.354 52.191 1 69.48 ? C3D HEM 601 B 1 
HETATM 32 C C4D HEM . . . F 2 177.487 -25.176 51.522 1 60.67 ? C4D HEM 601 B 1 
HETATM 33 C CMD HEM . . . F 2 174.421 -23.844 53.255 1 80.61 ? CMD HEM 601 B 1 
HETATM 34 C CAD HEM . . . F 2 175.53 -26.712 52.46 1 74.98 ? CAD HEM 601 B 1 
HETATM 35 C CBD HEM . . . F 2 174.393 -26.921 51.463 1 92.51 ? CBD HEM 601 B 1 
HETATM 36 C CGD HEM . . . F 2 173.864 -28.326 51.578 1 97.79 ? CGD HEM 601 B 1 
HETATM 37 O O1D HEM . . . F 2 172.761 -28.597 51.037 1 101.12 ? O1D HEM 601 B 1 
HETATM 38 O O2D HEM . . . F 2 174.543 -29.174 52.213 1 89.83 ? O2D HEM 601 B 1 
HETATM 39 N NA HEM . . . F 2 180.179 -24.812 50.235 1 59.68 ? NA HEM 601 B 1 
HETATM 40 N NB HEM . . . F 2 181.202 -22.116 50.065 1 63.11 ? NB HEM 601 B 1 
HETATM 41 N NC HEM . . . F 2 178.786 -21.117 51.357 1 63.08 ? NC HEM 601 B 1 
HETATM 42 N ND HEM . . . F 2 177.756 -23.82 51.472 1 61.29 ? ND HEM 601 B 1 
HETATM 43 FE FE HEM . . . F 2 179.514 -22.971 50.851 1 70.71 ? FE HEM 601 B 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#