data_7UFF
#
_model_server_result.job_id            gJQ0NvSMGg5TO-DBssdr2w 
_model_server_result.datetime_utc      '2024-11-24 08:20:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7uff 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":602}' 
#
_entry.id    7UFF 
#
_exptl.entry_id    7UFF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              595.754 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(2-oxo-2-{[(2S)-1-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]amino}ethyl)pyridine-3-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          125.2 
_cell.angle_gamma         90 
_cell.entry_id            7UFF 
_cell.length_a            156.618 
_cell.length_b            97.879 
_cell.length_c            95.149 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UFF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_756 -x+5/2,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 336.698042 48.9395 77.75052 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 C FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc2 C FE HEM . A HEM 601 1_555 E N29 NYF . A NYF 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc3 B SG CYS 422 B CYS 442 1_555 F FE HEM . B HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc4 F FE HEM . B HEM 601 1_555 G N29 NYF . B NYF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
#
_chem_comp.formula           'C34 H37 N5 O3 S' 
_chem_comp.formula_weight    595.754 
_chem_comp.id                NYF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(2-oxo-2-{[(2S)-1-{[(2R)-1-oxo-3-phenyl-1-{[3-(pyridin-3-yl)propyl]amino}propan-2-yl]sulfanyl}-3-phenylpropan-2-yl]amino}ethyl)pyridine-3-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C40 C41 NYF doub 319 n y 
C40 C39 NYF sing 320 n y 
C41 N42 NYF sing 321 n y 
C39 C37 NYF doub 322 n y 
N42 C43 NYF doub 323 n y 
C37 C43 NYF sing 324 n y 
C37 C36 NYF sing 325 n n 
C36 O38 NYF doub 326 n n 
C36 N35 NYF sing 327 n n 
N35 C34 NYF sing 328 n n 
O27 C11 NYF doub 329 n n 
C34 C11 NYF sing 330 n n 
C11 N10 NYF sing 331 n n 
C15 C19 NYF doub 332 n y 
C15 C16 NYF sing 333 n y 
C19 C14 NYF sing 334 n y 
C16 C17 NYF doub 335 n y 
C14 C13 NYF sing 336 n n 
C14 C18 NYF doub 337 n y 
N10 C09 NYF sing 338 n n 
C13 C06 NYF sing 339 n n 
C22 C26 NYF doub 340 n y 
C22 C21 NYF sing 341 n y 
C06 S07 NYF sing 342 n n 
C06 C05 NYF sing 343 n n 
C17 C18 NYF sing 344 n y 
C09 C20 NYF sing 345 n n 
C09 C08 NYF sing 346 n n 
C26 C25 NYF sing 347 n y 
C20 C21 NYF sing 348 n n 
C32 C31 NYF doub 349 n y 
C32 C33 NYF sing 350 n y 
S07 C08 NYF sing 351 n n 
C31 C28 NYF sing 352 n y 
N04 C05 NYF sing 353 n n 
N04 C03 NYF sing 354 n n 
C21 C23 NYF doub 355 n y 
C05 O12 NYF doub 356 n n 
C33 N29 NYF doub 357 n y 
C02 C03 NYF sing 358 n n 
C02 C01 NYF sing 359 n n 
C25 C24 NYF doub 360 n y 
C28 C01 NYF sing 361 n n 
C28 C30 NYF doub 362 n y 
C23 C24 NYF sing 363 n y 
N29 C30 NYF sing 364 n y 
C13 H1 NYF sing 365 n n 
C13 H2 NYF sing 366 n n 
C17 H3 NYF sing 367 n n 
C16 H4 NYF sing 368 n n 
C15 H5 NYF sing 369 n n 
C24 H6 NYF sing 370 n n 
C23 H7 NYF sing 371 n n 
C22 H8 NYF sing 372 n n 
C25 H9 NYF sing 373 n n 
C20 H10 NYF sing 374 n n 
C20 H11 NYF sing 375 n n 
C19 H12 NYF sing 376 n n 
C01 H13 NYF sing 377 n n 
C01 H14 NYF sing 378 n n 
C02 H15 NYF sing 379 n n 
C02 H16 NYF sing 380 n n 
C03 H17 NYF sing 381 n n 
C03 H18 NYF sing 382 n n 
C06 H19 NYF sing 383 n n 
C08 H20 NYF sing 384 n n 
C08 H21 NYF sing 385 n n 
C09 H22 NYF sing 386 n n 
C18 H23 NYF sing 387 n n 
C26 H24 NYF sing 388 n n 
C30 H25 NYF sing 389 n n 
C31 H26 NYF sing 390 n n 
C32 H27 NYF sing 391 n n 
C33 H28 NYF sing 392 n n 
C34 H29 NYF sing 393 n n 
C34 H30 NYF sing 394 n n 
C39 H31 NYF sing 395 n n 
C40 H32 NYF sing 396 n n 
C41 H33 NYF sing 397 n n 
C43 H34 NYF sing 398 n n 
N04 H35 NYF sing 399 n n 
N10 H36 NYF sing 400 n n 
N35 H37 NYF sing 401 n n 
#
_atom_sites.entry_id                     7UFF 
_atom_sites.fract_transf_matrix[1][1]    0.006385 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004504 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010217 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012862 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 601 500 HEM HEM . 
D 3 PO4 A 1 602 501 PO4 PO4 . 
E 4 NYF A 1 603 700 NYF 138 . 
F 2 HEM B 1 601 500 HEM HEM . 
G 4 NYF B 1 602 700 NYF 138 . 
H 5 HOH A 1 701 10 HOH HOH . 
H 5 HOH A 2 702 13 HOH HOH . 
H 5 HOH A 3 703 12 HOH HOH . 
H 5 HOH A 4 704 6 HOH HOH . 
H 5 HOH A 5 705 2 HOH HOH . 
H 5 HOH A 6 706 7 HOH HOH . 
H 5 HOH A 7 707 9 HOH HOH . 
H 5 HOH A 8 708 11 HOH HOH . 
H 5 HOH A 9 709 3 HOH HOH . 
H 5 HOH A 10 710 8 HOH HOH . 
H 5 HOH A 11 711 4 HOH HOH . 
H 5 HOH A 12 712 5 HOH HOH . 
H 5 HOH A 13 713 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 NYF . . . G 4 179.484 -27.941 61.357 1 92.33 ? C13 NYF 602 B 1 
HETATM 2 C C11 NYF . . . G 4 182.154 -32.321 59.059 1 112.35 ? C11 NYF 602 B 1 
HETATM 3 C C17 NYF . . . G 4 179.05 -24.147 61.689 1 111.13 ? C17 NYF 602 B 1 
HETATM 4 C C16 NYF . . . G 4 180.366 -23.697 61.526 1 110.13 ? C16 NYF 602 B 1 
HETATM 5 C C15 NYF . . . G 4 181.397 -24.618 61.309 1 114.32 ? C15 NYF 602 B 1 
HETATM 6 C C14 NYF . . . G 4 179.795 -26.441 61.421 1 102.46 ? C14 NYF 602 B 1 
HETATM 7 C C24 NYF . . . G 4 179.927 -27.756 54.14 1 111.93 ? C24 NYF 602 B 1 
HETATM 8 C C23 NYF . . . G 4 179.949 -28.954 54.859 1 99.43 ? C23 NYF 602 B 1 
HETATM 9 C C22 NYF . . . G 4 182.337 -28.749 55.168 1 110.37 ? C22 NYF 602 B 1 
HETATM 10 C C25 NYF . . . G 4 181.117 -27.047 53.932 1 126.66 ? C25 NYF 602 B 1 
HETATM 11 C C20 NYF . . . G 4 181.121 -30.791 56.145 1 95.44 ? C20 NYF 602 B 1 
HETATM 12 C C19 NYF . . . G 4 181.111 -25.989 61.255 1 113.04 ? C19 NYF 602 B 1 
HETATM 13 C C01 NYF . . . G 4 179.012 -23.461 56.227 1 94.71 ? C01 NYF 602 B 1 
HETATM 14 C C02 NYF . . . G 4 179.425 -24.389 57.385 1 98.37 ? C02 NYF 602 B 1 
HETATM 15 C C03 NYF . . . G 4 179.215 -25.869 57.02 1 108.07 ? C03 NYF 602 B 1 
HETATM 16 C C05 NYF . . . G 4 179.11 -27.494 58.927 1 108.14 ? C05 NYF 602 B 1 
HETATM 17 C C06 NYF . . . G 4 179.764 -28.455 59.935 1 98.78 ? C06 NYF 602 B 1 
HETATM 18 C C08 NYF . . . G 4 179.256 -30.355 57.847 1 113.89 ? C08 NYF 602 B 1 
HETATM 19 C C09 NYF . . . G 4 180.747 -30.683 57.633 1 106.33 ? C09 NYF 602 B 1 
HETATM 20 C C18 NYF . . . G 4 178.765 -25.518 61.635 1 106.53 ? C18 NYF 602 B 1 
HETATM 21 C C21 NYF . . . G 4 181.144 -29.453 55.378 1 96.8 ? C21 NYF 602 B 1 
HETATM 22 C C26 NYF . . . G 4 182.322 -27.546 54.447 1 123.07 ? C26 NYF 602 B 1 
HETATM 23 C C28 NYF . . . G 4 180.074 -23.451 55.114 1 89.42 ? C28 NYF 602 B 1 
HETATM 24 C C30 NYF . . . G 4 179.703 -23.297 53.772 1 92.37 ? C30 NYF 602 B 1 
HETATM 25 C C31 NYF . . . G 4 181.428 -23.603 55.436 1 88.33 ? C31 NYF 602 B 1 
HETATM 26 C C32 NYF . . . G 4 182.365 -23.592 54.394 1 83.11 ? C32 NYF 602 B 1 
HETATM 27 C C33 NYF . . . G 4 181.922 -23.432 53.077 1 79.63 ? C33 NYF 602 B 1 
HETATM 28 C C34 NYF . . . G 4 182.29 -33.717 59.696 1 113.52 ? C34 NYF 602 B 1 
HETATM 29 C C36 NYF . . . G 4 184.232 -35.269 60.262 1 120.76 ? C36 NYF 602 B 1 
HETATM 30 C C37 NYF . . . G 4 185.667 -35.717 59.973 1 123.47 ? C37 NYF 602 B 1 
HETATM 31 C C39 NYF . . . G 4 186.605 -35.868 61.003 1 134.06 ? C39 NYF 602 B 1 
HETATM 32 C C40 NYF . . . G 4 187.899 -36.283 60.657 1 132.38 ? C40 NYF 602 B 1 
HETATM 33 C C41 NYF . . . G 4 188.21 -36.524 59.312 1 111.41 ? C41 NYF 602 B 1 
HETATM 34 C C43 NYF . . . G 4 186.047 -35.965 58.654 1 122.05 ? C43 NYF 602 B 1 
HETATM 35 N N04 NYF . . . G 4 179.92 -26.759 57.952 1 105.75 ? N04 NYF 602 B 1 
HETATM 36 N N10 NYF . . . G 4 180.961 -31.992 58.269 1 113.47 ? N10 NYF 602 B 1 
HETATM 37 N N29 NYF . . . G 4 180.619 -23.289 52.794 1 98.45 ? N29 NYF 602 B 1 
HETATM 38 N N35 NYF . . . G 4 183.659 -34.184 59.455 1 113.01 ? N35 NYF 602 B 1 
HETATM 39 N N42 NYF . . . G 4 187.29 -36.361 58.354 1 118.75 ? N42 NYF 602 B 1 
HETATM 40 O O12 NYF . . . G 4 177.91 -27.34 58.934 1 113.63 ? O12 NYF 602 B 1 
HETATM 41 O O27 NYF . . . G 4 183.044 -31.515 59.198 1 117.86 ? O27 NYF 602 B 1 
HETATM 42 O O38 NYF . . . G 4 183.586 -35.809 61.128 1 126.68 ? O38 NYF 602 B 1 
HETATM 43 S S07 NYF . . . G 4 179.065 -30.105 59.634 1 107.6 ? S07 NYF 602 B 1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           370 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#