data_7UFQ # _model_server_result.job_id MYrcg1x_s7XJWpmLVcbozw _model_server_result.datetime_utc '2025-01-12 04:00:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ufq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 7UFQ # _exptl.entry_id 7UFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.74 _cell.angle_gamma 90 _cell.entry_id 7UFQ _cell.length_a 74.482 _cell.length_b 61.697 _cell.length_c 89.604 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J 1 1 D,E,F,K,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 148 H CYS 140 1_555 A SG CYS 204 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 23 L CYS 23 1_555 C SG CYS 94 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf4 D SG CYS 22 B CYS 22 1_555 D SG CYS 96 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf5 D SG CYS 148 B CYS 140 1_555 D SG CYS 204 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 F SG CYS 23 D CYS 23 1_555 F SG CYS 94 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7UFQ _atom_sites.fract_transf_matrix[1][1] 0.013426 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003283 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016208 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 GOL H 1 301 301 GOL GOL . H 5 HOH H 1 401 6 HOH HOH . H 5 HOH H 2 402 12 HOH HOH . H 5 HOH H 3 403 87 HOH HOH . H 5 HOH H 4 404 77 HOH HOH . H 5 HOH H 5 405 81 HOH HOH . H 5 HOH H 6 406 58 HOH HOH . H 5 HOH H 7 407 54 HOH HOH . H 5 HOH H 8 408 67 HOH HOH . H 5 HOH H 9 409 79 HOH HOH . H 5 HOH H 10 410 98 HOH HOH . H 5 HOH H 11 411 44 HOH HOH . H 5 HOH H 12 412 53 HOH HOH . H 5 HOH H 13 413 75 HOH HOH . H 5 HOH H 14 414 85 HOH HOH . H 5 HOH H 15 415 84 HOH HOH . H 5 HOH H 16 416 133 HOH HOH . H 5 HOH H 17 417 57 HOH HOH . H 5 HOH H 18 418 45 HOH HOH . H 5 HOH H 19 419 110 HOH HOH . H 5 HOH H 20 420 20 HOH HOH . H 5 HOH H 21 421 13 HOH HOH . H 5 HOH H 22 422 124 HOH HOH . H 5 HOH H 23 423 125 HOH HOH . I 5 HOH A 1 101 11 HOH HOH . I 5 HOH A 2 102 34 HOH HOH . J 5 HOH L 1 301 102 HOH HOH . J 5 HOH L 2 302 60 HOH HOH . J 5 HOH L 3 303 49 HOH HOH . J 5 HOH L 4 304 26 HOH HOH . J 5 HOH L 5 305 71 HOH HOH . J 5 HOH L 6 306 80 HOH HOH . J 5 HOH L 7 307 35 HOH HOH . J 5 HOH L 8 308 24 HOH HOH . J 5 HOH L 9 309 113 HOH HOH . J 5 HOH L 10 310 92 HOH HOH . J 5 HOH L 11 311 33 HOH HOH . J 5 HOH L 12 312 126 HOH HOH . J 5 HOH L 13 313 108 HOH HOH . J 5 HOH L 14 314 100 HOH HOH . J 5 HOH L 15 315 1 HOH HOH . J 5 HOH L 16 316 115 HOH HOH . J 5 HOH L 17 317 55 HOH HOH . J 5 HOH L 18 318 136 HOH HOH . J 5 HOH L 19 319 93 HOH HOH . J 5 HOH L 20 320 47 HOH HOH . J 5 HOH L 21 321 82 HOH HOH . J 5 HOH L 22 322 30 HOH HOH . J 5 HOH L 23 323 16 HOH HOH . J 5 HOH L 24 324 9 HOH HOH . J 5 HOH L 25 325 66 HOH HOH . J 5 HOH L 26 326 91 HOH HOH . J 5 HOH L 27 327 111 HOH HOH . J 5 HOH L 28 328 42 HOH HOH . J 5 HOH L 29 329 141 HOH HOH . J 5 HOH L 30 330 18 HOH HOH . J 5 HOH L 31 331 61 HOH HOH . J 5 HOH L 32 332 132 HOH HOH . J 5 HOH L 33 333 129 HOH HOH . J 5 HOH L 34 334 128 HOH HOH . J 5 HOH L 35 335 117 HOH HOH . K 5 HOH B 1 301 46 HOH HOH . K 5 HOH B 2 302 23 HOH HOH . K 5 HOH B 3 303 29 HOH HOH . K 5 HOH B 4 304 74 HOH HOH . K 5 HOH B 5 305 97 HOH HOH . K 5 HOH B 6 306 130 HOH HOH . K 5 HOH B 7 307 73 HOH HOH . K 5 HOH B 8 308 50 HOH HOH . K 5 HOH B 9 309 41 HOH HOH . K 5 HOH B 10 310 140 HOH HOH . K 5 HOH B 11 311 28 HOH HOH . K 5 HOH B 12 312 151 HOH HOH . K 5 HOH B 13 313 65 HOH HOH . K 5 HOH B 14 314 19 HOH HOH . K 5 HOH B 15 315 121 HOH HOH . K 5 HOH B 16 316 39 HOH HOH . K 5 HOH B 17 317 63 HOH HOH . K 5 HOH B 18 318 90 HOH HOH . K 5 HOH B 19 319 142 HOH HOH . L 5 HOH C 1 101 64 HOH HOH . L 5 HOH C 2 102 36 HOH HOH . L 5 HOH C 3 103 48 HOH HOH . L 5 HOH C 4 104 95 HOH HOH . L 5 HOH C 5 105 2 HOH HOH . L 5 HOH C 6 106 127 HOH HOH . L 5 HOH C 7 107 69 HOH HOH . M 5 HOH D 1 301 76 HOH HOH . M 5 HOH D 2 302 59 HOH HOH . M 5 HOH D 3 303 31 HOH HOH . M 5 HOH D 4 304 40 HOH HOH . M 5 HOH D 5 305 37 HOH HOH . M 5 HOH D 6 306 56 HOH HOH . M 5 HOH D 7 307 137 HOH HOH . M 5 HOH D 8 308 38 HOH HOH . M 5 HOH D 9 309 5 HOH HOH . M 5 HOH D 10 310 10 HOH HOH . M 5 HOH D 11 311 3 HOH HOH . M 5 HOH D 12 312 116 HOH HOH . M 5 HOH D 13 313 27 HOH HOH . M 5 HOH D 14 314 68 HOH HOH . M 5 HOH D 15 315 7 HOH HOH . M 5 HOH D 16 316 22 HOH HOH . M 5 HOH D 17 317 32 HOH HOH . M 5 HOH D 18 318 72 HOH HOH . M 5 HOH D 19 319 70 HOH HOH . M 5 HOH D 20 320 120 HOH HOH . M 5 HOH D 21 321 94 HOH HOH . M 5 HOH D 22 322 149 HOH HOH . M 5 HOH D 23 323 43 HOH HOH . M 5 HOH D 24 324 139 HOH HOH . M 5 HOH D 25 325 52 HOH HOH . M 5 HOH D 26 326 143 HOH HOH . M 5 HOH D 27 327 134 HOH HOH . M 5 HOH D 28 328 138 HOH HOH . M 5 HOH D 29 329 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 3.852 7.525 1.94 1 20 ? C1 GOL 301 H 1 HETATM 2 O O1 GOL . . . G 4 3.957 6.592 0.875 1 20 ? O1 GOL 301 H 1 HETATM 3 C C2 GOL . . . G 4 2.533 7.38 2.663 1 20 ? C2 GOL 301 H 1 HETATM 4 O O2 GOL . . . G 4 2.387 8.444 3.6 1 20 ? O2 GOL 301 H 1 HETATM 5 C C3 GOL . . . G 4 1.35 7.332 1.722 1 20 ? C3 GOL 301 H 1 HETATM 6 O O3 GOL . . . G 4 0.134 7.607 2.404 1 20 ? O3 GOL 301 H 1 HETATM 7 H H11 GOL . . . G 4 3.934 8.442 1.581 1 20 ? H11 GOL 301 H 1 HETATM 8 H H12 GOL . . . G 4 4.585 7.367 2.576 1 20 ? H12 GOL 301 H 1 HETATM 9 H HO1 GOL . . . G 4 3.849 7.023 0.157 1 20 ? HO1 GOL 301 H 1 HETATM 10 H H2 GOL . . . G 4 2.554 6.53 3.163 1 20 ? H2 GOL 301 H 1 HETATM 11 H HO2 GOL . . . G 4 2.074 9.11 3.186 1 20 ? HO2 GOL 301 H 1 HETATM 12 H H31 GOL . . . G 4 1.296 6.435 1.318 1 20 ? H31 GOL 301 H 1 HETATM 13 H H32 GOL . . . G 4 1.477 7.993 0.997 1 20 ? H32 GOL 301 H 1 HETATM 14 H HO3 GOL . . . G 4 -0.256 6.872 2.552 1 20 ? HO3 GOL 301 H 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #