data_7UHF # _model_server_result.job_id 7bRCmWQ2DhL-q-jkzl024g _model_server_result.datetime_utc '2024-11-22 13:46:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7uhf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2201}' # _entry.id 7UHF # _exptl.entry_id 7UHF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 368.514 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(diphenylmethyl)-4-[(2E)-3-phenylprop-2-en-1-yl]piperazine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UHF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UHF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 6 3 2 NAG NAG C1 O1 . O4 HO4 . sing 6 ? 6 4 3 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 B 1 NAG D 1102 NAG 4 n D NAG 2 B 2 NAG D 1103 NAG 4 n D NAG 3 B 3 NAG D 1104 NAG 5 n E NAG 1 E 1 NAG D 1105 NAG 5 n E NAG 2 E 2 NAG D 1106 NAG 6 n F NAG 1 F 1 NAG D 1107 NAG 6 n F NAG 2 F 2 NAG D 1108 NAG 6 n F NAG 3 F 3 NAG D 1109 NAG 6 n F NAG 4 F 4 NAG D 1110 NAG 5 n G NAG 1 G 1 NAG D 1111 NAG 5 n G NAG 2 G 2 NAG D 1112 NAG 5 n H NAG 1 H 1 NAG D 1114 NAG 5 n H NAG 2 H 2 NAG D 1115 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 301 A CYS 301 1_555 A SG CYS 326 A CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 317 A CYS 317 1_555 A SG CYS 333 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 1044 A CYS 1044 1_555 A SG CYS 1055 A CYS 1055 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 1421 A CYS 1421 1_555 A SG CYS 1435 A CYS 1435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 B SG CYS 303 D CYS 303 1_555 B SG CYS 1044 D CYS 1044 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 404 D CYS 404 1_555 B SG CYS 1071 D CYS 1071 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 667 D CYS 667 1_555 B SG CYS 697 D CYS 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf8 B SG CYS 904 D CYS 904 1_555 B SG CYS 974 D CYS 974 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 B SG CYS 996 D CYS 996 1_555 B SG CYS 1026 D CYS 1026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf10 B SG CYS 999 D CYS 999 1_555 B SG CYS 1024 D CYS 1024 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 B ND2 ASN 92 D ASN 92 1_555 N C1 NAG . D NAG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale2 B ND2 ASN 184 D ASN 184 1_555 D C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale3 B ND2 ASN 348 D ASN 348 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale4 B ND2 ASN 468 D ASN 468 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale5 B ND2 ASN 613 D ASN 613 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale6 B ND2 ASN 895 D ASN 895 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale7 D O4 NAG . B NAG 1 1_555 D C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale8 D O4 NAG . B NAG 2 1_555 D C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale9 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale10 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale11 F O4 NAG . F NAG 2 1_555 F C1 NAG . F NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale12 F O4 NAG . F NAG 3 1_555 F C1 NAG . F NAG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale13 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale14 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? metalc ? metalc1 A OD2 ASP 153 A ASP 153 1_555 P CA CA . D CA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc2 A OE2 GLU 364 A GLU 364 1_555 K CA CA . A CA 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc3 A OE1 GLU 705 A GLU 705 1_555 K CA CA . A CA 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc4 A OE1 GLU 1101 A GLU 1101 1_555 K CA CA . A CA 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc5 A OE2 GLU 1101 A GLU 1101 1_555 K CA CA . A CA 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc6 B OG SER 261 D SER 261 1_555 P CA CA . D CA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc7 B OG SER 263 D SER 263 1_555 P CA CA . D CA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc8 B OG1 THR 331 D THR 331 1_555 P CA CA . D CA 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? # _chem_comp.formula 'C26 H28 N2' _chem_comp.formula_weight 368.514 _chem_comp.id N90 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(diphenylmethyl)-4-[(2E)-3-phenylprop-2-en-1-yl]piperazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Cinnarizine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C05 C04 N90 doub 367 n y C05 C06 N90 sing 368 n y C04 C03 N90 sing 369 n y C06 C01 N90 doub 370 n y C03 C02 N90 doub 371 n y C01 C02 N90 sing 372 n y C20 N17 N90 sing 373 n n C20 C21 N90 sing 374 n n N17 C18 N90 sing 375 n n N17 C16 N90 sing 376 n n C22 C21 N90 doub 377 e n C22 C23 N90 sing 378 n n C02 C07 N90 sing 379 n n C18 C19 N90 sing 380 n n C19 N14 N90 sing 381 n n C24 C23 N90 doub 382 n y C24 C25 N90 sing 383 n y C23 C28 N90 sing 384 n y C16 C15 N90 sing 385 n n C25 C26 N90 doub 386 n y C15 N14 N90 sing 387 n n N14 C07 N90 sing 388 n n C07 C08 N90 sing 389 n n C28 C27 N90 doub 390 n y C26 C27 N90 sing 391 n y C08 C13 N90 doub 392 n y C08 C09 N90 sing 393 n y C13 C12 N90 sing 394 n y C09 C10 N90 doub 395 n y C12 C11 N90 doub 396 n y C10 C11 N90 sing 397 n y C01 H1 N90 sing 398 n n C03 H2 N90 sing 399 n n C04 H3 N90 sing 400 n n C05 H4 N90 sing 401 n n C06 H5 N90 sing 402 n n C07 H6 N90 sing 403 n n C09 H7 N90 sing 404 n n C10 H8 N90 sing 405 n n C11 H9 N90 sing 406 n n C12 H10 N90 sing 407 n n C13 H11 N90 sing 408 n n C15 H12 N90 sing 409 n n C15 H13 N90 sing 410 n n C16 H14 N90 sing 411 n n C16 H15 N90 sing 412 n n C18 H16 N90 sing 413 n n C18 H17 N90 sing 414 n n C19 H18 N90 sing 415 n n C19 H19 N90 sing 416 n n C20 H20 N90 sing 417 n n C20 H21 N90 sing 418 n n C21 H22 N90 sing 419 n n C22 H23 N90 sing 420 n n C24 H24 N90 sing 421 n n C25 H25 N90 sing 422 n n C26 H26 N90 sing 423 n n C27 H27 N90 sing 424 n n C28 H28 N90 sing 425 n n # _atom_sites.entry_id 7UHF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 7 N90 A 1 2201 1701 N90 CIN . J 8 NAG A 1 2202 1801 NAG NAG . K 9 CA A 1 2203 1 CA CA . L 10 Y01 A 1 2204 3 Y01 Y01 . M 11 3PE A 1 2205 5 3PE 3PE . N 8 NAG D 1 1201 1101 NAG NAG . O 8 NAG D 1 1202 1113 NAG NAG . P 9 CA D 1 1203 2 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 N90 . . . I 7 144.944 155.035 148.799 1 22.53 ? C01 N90 2201 A 1 HETATM 2 C C02 N90 . . . I 7 145.294 156.265 149.402 1 22.53 ? C02 N90 2201 A 1 HETATM 3 C C03 N90 . . . I 7 145.009 157.473 148.746 1 22.53 ? C03 N90 2201 A 1 HETATM 4 C C04 N90 . . . I 7 144.379 157.457 147.501 1 22.53 ? C04 N90 2201 A 1 HETATM 5 C C05 N90 . . . I 7 144.041 156.26 146.92 1 22.53 ? C05 N90 2201 A 1 HETATM 6 C C06 N90 . . . I 7 144.333 155.024 147.588 1 22.53 ? C06 N90 2201 A 1 HETATM 7 C C07 N90 . . . I 7 146.019 156.3 150.827 1 22.53 ? C07 N90 2201 A 1 HETATM 8 C C08 N90 . . . I 7 145.056 155.908 151.994 1 22.53 ? C08 N90 2201 A 1 HETATM 9 C C09 N90 . . . I 7 145.244 154.801 152.736 1 22.53 ? C09 N90 2201 A 1 HETATM 10 C C10 N90 . . . I 7 144.367 154.486 153.761 1 22.53 ? C10 N90 2201 A 1 HETATM 11 C C11 N90 . . . I 7 143.283 155.313 154.031 1 22.53 ? C11 N90 2201 A 1 HETATM 12 C C12 N90 . . . I 7 143.086 156.424 153.294 1 22.53 ? C12 N90 2201 A 1 HETATM 13 C C13 N90 . . . I 7 143.969 156.735 152.268 1 22.53 ? C13 N90 2201 A 1 HETATM 14 C C15 N90 . . . I 7 147.069 154.385 150.588 1 22.53 ? C15 N90 2201 A 1 HETATM 15 C C16 N90 . . . I 7 148.475 153.72 150.44 1 22.53 ? C16 N90 2201 A 1 HETATM 16 C C18 N90 . . . I 7 149.274 155.617 149.49 1 22.53 ? C18 N90 2201 A 1 HETATM 17 C C19 N90 . . . I 7 147.904 156.322 149.799 1 22.53 ? C19 N90 2201 A 1 HETATM 18 C C20 N90 . . . I 7 150.312 153.627 149.176 1 22.53 ? C20 N90 2201 A 1 HETATM 19 C C21 N90 . . . I 7 151.485 154.257 149.926 1 22.53 ? C21 N90 2201 A 1 HETATM 20 C C22 N90 . . . I 7 152.111 155.305 149.399 1 22.53 ? C22 N90 2201 A 1 HETATM 21 C C23 N90 . . . I 7 153.316 155.963 150.161 1 22.53 ? C23 N90 2201 A 1 HETATM 22 C C24 N90 . . . I 7 154.621 155.576 149.854 1 22.53 ? C24 N90 2201 A 1 HETATM 23 C C25 N90 . . . I 7 155.667 156.137 150.509 1 22.53 ? C25 N90 2201 A 1 HETATM 24 C C26 N90 . . . I 7 155.442 157.084 151.472 1 22.53 ? C26 N90 2201 A 1 HETATM 25 C C27 N90 . . . I 7 154.112 157.485 151.793 1 22.53 ? C27 N90 2201 A 1 HETATM 26 C C28 N90 . . . I 7 153.08 156.935 151.149 1 22.53 ? C28 N90 2201 A 1 HETATM 27 N N14 N90 . . . I 7 147.169 155.721 150.794 1 22.53 ? N14 N90 2201 A 1 HETATM 28 N N17 N90 . . . I 7 149.158 154.268 149.383 1 22.53 ? N17 N90 2201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #