data_7UHP # _model_server_result.job_id eT5WztxP2-oEyLw7ebXV2g _model_server_result.datetime_utc '2024-12-27 02:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7uhp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7UHP # _exptl.entry_id 7UHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 538.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-[(R)-carboxy{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}methoxymethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-oxazine-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7UHP _cell.length_a 105.853 _cell.length_b 105.853 _cell.length_c 99.1 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 105.853 0 0 3 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 11_655 -x+y+1,y,-z -1 0 0 0 1 0 0 0 -1 105.853 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 90 A HIS 105 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc2 A ND1 HIS 92 A HIS 107 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 A OD2 ASP 94 A ASP 109 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc4 A NE2 HIS 95 A HIS 110 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc5 A NE2 HIS 166 A HIS 181 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc6 A NE2 HIS 231 A HIS 246 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc7 B ZN ZN . A ZN 301 1_555 D O10 XQP . A XQP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc8 C ZN ZN . A ZN 302 1_555 D N1 XQP . A XQP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc9 C ZN ZN . A ZN 302 1_555 D O8 XQP . A XQP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? # _chem_comp.formula 'C20 H22 N6 O10 S' _chem_comp.formula_weight 538.488 _chem_comp.id XQP _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-[(R)-carboxy{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}methoxymethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-oxazine-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C13 XQP sing 376 n n C12 C13 XQP doub 377 n y C12 C11 XQP sing 378 n y C13 C14 XQP sing 379 n y C11 C10 XQP doub 380 n y C14 C15 XQP doub 381 n y C10 C15 XQP sing 382 n y C10 C9 XQP sing 383 n n C7 O3 XQP sing 384 n n O4 C8 XQP doub 385 n n O3 C6 XQP sing 386 n n C8 C9 XQP sing 387 n n C8 N2 XQP sing 388 n n C9 C16 XQP sing 389 n n N2 C6 XQP sing 390 n n C6 C5 XQP sing 391 n n C6 C1 XQP sing 392 n n C16 O7 XQP doub 393 n n C16 O6 XQP sing 394 n n C5 O2 XQP sing 395 n n C5 N1 XQP sing 396 n n O10 C1 XQP doub 397 n n C1 O1 XQP sing 398 n n O2 C4 XQP sing 399 n n N1 C2 XQP sing 400 n n C4 C3 XQP sing 401 n n C2 C3 XQP doub 402 n n C2 C20 XQP sing 403 n n O8 C20 XQP doub 404 n n C3 C17 XQP sing 405 n n C20 O9 XQP sing 406 n n N4 N3 XQP sing 407 n y N4 N5 XQP doub 408 n y N3 C18 XQP doub 409 n y N5 N6 XQP sing 410 n y C17 S1 XQP sing 411 n n C18 N6 XQP sing 412 n y C18 S1 XQP sing 413 n n N6 C19 XQP sing 414 n n O1 H1 XQP sing 415 n n N2 H2 XQP sing 416 n n C5 H4 XQP sing 417 n n C7 H5 XQP sing 418 n n C7 H6 XQP sing 419 n n C7 H7 XQP sing 420 n n C9 H8 XQP sing 421 n n C11 H9 XQP sing 422 n n C12 H10 XQP sing 423 n n C14 H11 XQP sing 424 n n C15 H12 XQP sing 425 n n C17 H13 XQP sing 426 n n C17 H14 XQP sing 427 n n C19 H15 XQP sing 428 n n C19 H16 XQP sing 429 n n C19 H17 XQP sing 430 n n C4 H18 XQP sing 431 n n C4 H19 XQP sing 432 n n O5 H20 XQP sing 433 n n O6 H21 XQP sing 434 n n O9 H22 XQP sing 435 n n N1 H3 XQP sing 436 n n # _atom_sites.entry_id 7UHP _atom_sites.fract_transf_matrix[1][1] 0.009447 _atom_sites.fract_transf_matrix[1][2] 0.005454 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010909 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 3 XQP A 1 303 303 XQP MX2 . E 4 HOH A 1 401 418 HOH HOH . E 4 HOH A 2 402 434 HOH HOH . E 4 HOH A 3 403 425 HOH HOH . E 4 HOH A 4 404 433 HOH HOH . E 4 HOH A 5 405 431 HOH HOH . E 4 HOH A 6 406 448 HOH HOH . E 4 HOH A 7 407 401 HOH HOH . E 4 HOH A 8 408 402 HOH HOH . E 4 HOH A 9 409 413 HOH HOH . E 4 HOH A 10 410 445 HOH HOH . E 4 HOH A 11 411 406 HOH HOH . E 4 HOH A 12 412 443 HOH HOH . E 4 HOH A 13 413 423 HOH HOH . E 4 HOH A 14 414 449 HOH HOH . E 4 HOH A 15 415 435 HOH HOH . E 4 HOH A 16 416 417 HOH HOH . E 4 HOH A 17 417 421 HOH HOH . E 4 HOH A 18 418 415 HOH HOH . E 4 HOH A 19 419 414 HOH HOH . E 4 HOH A 20 420 438 HOH HOH . E 4 HOH A 21 421 422 HOH HOH . E 4 HOH A 22 423 441 HOH HOH . E 4 HOH A 23 424 405 HOH HOH . E 4 HOH A 24 425 419 HOH HOH . E 4 HOH A 25 426 436 HOH HOH . E 4 HOH A 26 427 411 HOH HOH . E 4 HOH A 27 428 446 HOH HOH . E 4 HOH A 28 429 424 HOH HOH . E 4 HOH A 29 430 428 HOH HOH . E 4 HOH A 30 431 409 HOH HOH . E 4 HOH A 31 432 439 HOH HOH . E 4 HOH A 32 433 432 HOH HOH . E 4 HOH A 33 434 410 HOH HOH . E 4 HOH A 34 435 408 HOH HOH . E 4 HOH A 35 436 440 HOH HOH . E 4 HOH A 36 438 403 HOH HOH . E 4 HOH A 37 439 404 HOH HOH . E 4 HOH A 38 440 426 HOH HOH . E 4 HOH A 39 441 437 HOH HOH . E 4 HOH A 40 442 442 HOH HOH . E 4 HOH A 41 443 447 HOH HOH . E 4 HOH A 42 444 429 HOH HOH . E 4 HOH A 43 445 416 HOH HOH . E 4 HOH A 44 446 427 HOH HOH . E 4 HOH A 45 447 444 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XQP . . . D 3 32.995 2.696 15.586 0.9 5.23 ? C1 XQP 303 A 1 HETATM 2 O O1 XQP . . . D 3 32.62 1.711 16.253 0.9 5.24 ? O1 XQP 303 A 1 HETATM 3 C C2 XQP . . . D 3 32.292 5.526 17.249 0.9 5.64 ? C2 XQP 303 A 1 HETATM 4 N N2 XQP . . . D 3 30.955 2.318 14.378 0.9 6.06 ? N2 XQP 303 A 1 HETATM 5 C C3 XQP . . . D 3 31.154 5.104 17.834 0.9 6.38 ? C3 XQP 303 A 1 HETATM 6 O O4 XQP . . . D 3 29.919 3.364 12.66 0.9 6.5 ? O4 XQP 303 A 1 HETATM 7 C C5 XQP . . . D 3 31.45 4.649 15.064 0.9 5.18 ? C5 XQP 303 A 1 HETATM 8 C C6 XQP . . . D 3 32.009 3.303 14.584 0.9 5.41 ? C6 XQP 303 A 1 HETATM 9 C C7 XQP . . . D 3 33.35 2.402 12.762 0.9 5.37 ? C7 XQP 303 A 1 HETATM 10 C C8 XQP . . . D 3 30.011 2.414 13.439 0.9 6.83 ? C8 XQP 303 A 1 HETATM 11 C C9 XQP . . . D 3 29.035 1.231 13.381 0.9 7.85 ? C9 XQP 303 A 1 HETATM 12 C C10 XQP . . . D 3 29.541 0.136 12.455 0.9 6.09 ? C10 XQP 303 A 1 HETATM 13 C C16 XQP . . . D 3 28.75 0.657 14.782 0.9 8.55 ? C16 XQP 303 A 1 HETATM 14 C C17 XQP . . . D 3 30.6 5.581 19.15 0.9 5.81 ? C17 XQP 303 A 1 HETATM 15 C C20 XQP . . . D 3 33.453 6.204 17.972 0.9 4.07 ? C20 XQP 303 A 1 HETATM 16 C C4 XQP . . . D 3 30.36 4.069 17.103 0.9 5.91 ? C4 XQP 303 A 1 HETATM 17 N N1 XQP . . . D 3 32.437 5.345 15.893 0.9 4.9 ? N1 XQP 303 A 1 HETATM 18 O O10 XQP . . . D 3 34.143 3.175 15.689 0.9 4.25 ? O10 XQP 303 A 1 HETATM 19 O O2 XQP . . . D 3 30.203 4.452 15.74 0.9 5.51 ? O2 XQP 303 A 1 HETATM 20 O O3 XQP . . . D 3 32.739 3.537 13.362 0.9 5.03 ? O3 XQP 303 A 1 HETATM 21 O O6 XQP . . . D 3 29.676 0.181 15.398 0.9 7.11 ? O6 XQP 303 A 1 HETATM 22 O O7 XQP . . . D 3 27.613 0.706 15.192 0.9 8.98 ? O7 XQP 303 A 1 HETATM 23 O O8 XQP . . . D 3 34.338 6.634 17.256 0.9 3.65 ? O8 XQP 303 A 1 HETATM 24 O O9 XQP . . . D 3 33.416 6.226 19.189 0.9 3.53 ? O9 XQP 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #