data_7UJT # _model_server_result.job_id ux2hvGm1i9wD2Ls-5-crKA _model_server_result.datetime_utc '2024-11-22 15:15:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ujt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 7UJT # _exptl.entry_id 7UJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.43 _cell.angle_gamma 90 _cell.entry_id 7UJT _cell.length_a 47.308 _cell.length_b 67.252 _cell.length_c 45.722 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O2G ATP . A ATP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc2 C O1B ATP . A ATP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 C O1A ATP . A ATP 301 1_555 E MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 7UJT _atom_sites.fract_transf_matrix[1][1] 0.021138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001638 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP A 1 301 1 ATP ATP . D 4 GOL A 1 302 2 GOL GOL . E 5 MG A 1 303 1 MG MG . F 6 HOH A 1 401 5 HOH HOH . F 6 HOH A 2 402 73 HOH HOH . F 6 HOH A 3 403 81 HOH HOH . F 6 HOH A 4 404 36 HOH HOH . F 6 HOH A 5 405 44 HOH HOH . F 6 HOH A 6 406 67 HOH HOH . F 6 HOH A 7 407 102 HOH HOH . F 6 HOH A 8 408 51 HOH HOH . F 6 HOH A 9 409 90 HOH HOH . F 6 HOH A 10 410 34 HOH HOH . F 6 HOH A 11 411 38 HOH HOH . F 6 HOH A 12 412 35 HOH HOH . F 6 HOH A 13 413 72 HOH HOH . F 6 HOH A 14 414 61 HOH HOH . F 6 HOH A 15 415 27 HOH HOH . F 6 HOH A 16 416 59 HOH HOH . F 6 HOH A 17 417 10 HOH HOH . F 6 HOH A 18 418 82 HOH HOH . F 6 HOH A 19 419 47 HOH HOH . F 6 HOH A 20 420 94 HOH HOH . F 6 HOH A 21 421 95 HOH HOH . F 6 HOH A 22 422 115 HOH HOH . F 6 HOH A 23 423 66 HOH HOH . F 6 HOH A 24 424 33 HOH HOH . F 6 HOH A 25 425 8 HOH HOH . F 6 HOH A 26 426 88 HOH HOH . F 6 HOH A 27 427 40 HOH HOH . F 6 HOH A 28 428 85 HOH HOH . F 6 HOH A 29 429 77 HOH HOH . F 6 HOH A 30 430 50 HOH HOH . F 6 HOH A 31 431 60 HOH HOH . F 6 HOH A 32 432 75 HOH HOH . F 6 HOH A 33 433 106 HOH HOH . F 6 HOH A 34 434 3 HOH HOH . F 6 HOH A 35 435 65 HOH HOH . F 6 HOH A 36 436 112 HOH HOH . F 6 HOH A 37 437 25 HOH HOH . F 6 HOH A 38 438 103 HOH HOH . F 6 HOH A 39 439 97 HOH HOH . F 6 HOH A 40 440 15 HOH HOH . F 6 HOH A 41 441 14 HOH HOH . F 6 HOH A 42 442 63 HOH HOH . F 6 HOH A 43 443 46 HOH HOH . F 6 HOH A 44 444 100 HOH HOH . F 6 HOH A 45 445 21 HOH HOH . F 6 HOH A 46 446 24 HOH HOH . F 6 HOH A 47 447 48 HOH HOH . F 6 HOH A 48 448 2 HOH HOH . F 6 HOH A 49 449 79 HOH HOH . F 6 HOH A 50 450 32 HOH HOH . F 6 HOH A 51 451 78 HOH HOH . F 6 HOH A 52 452 71 HOH HOH . F 6 HOH A 53 453 6 HOH HOH . F 6 HOH A 54 454 7 HOH HOH . F 6 HOH A 55 455 93 HOH HOH . F 6 HOH A 56 456 68 HOH HOH . F 6 HOH A 57 457 111 HOH HOH . F 6 HOH A 58 458 4 HOH HOH . F 6 HOH A 59 459 49 HOH HOH . F 6 HOH A 60 460 12 HOH HOH . F 6 HOH A 61 461 62 HOH HOH . F 6 HOH A 62 462 109 HOH HOH . F 6 HOH A 63 463 64 HOH HOH . F 6 HOH A 64 464 13 HOH HOH . F 6 HOH A 65 465 45 HOH HOH . F 6 HOH A 66 466 54 HOH HOH . F 6 HOH A 67 467 9 HOH HOH . F 6 HOH A 68 468 57 HOH HOH . F 6 HOH A 69 469 96 HOH HOH . F 6 HOH A 70 470 28 HOH HOH . F 6 HOH A 71 471 26 HOH HOH . F 6 HOH A 72 472 30 HOH HOH . F 6 HOH A 73 473 110 HOH HOH . F 6 HOH A 74 474 53 HOH HOH . F 6 HOH A 75 475 80 HOH HOH . F 6 HOH A 76 476 11 HOH HOH . F 6 HOH A 77 477 98 HOH HOH . F 6 HOH A 78 478 52 HOH HOH . F 6 HOH A 79 479 113 HOH HOH . F 6 HOH A 80 480 1 HOH HOH . F 6 HOH A 81 481 99 HOH HOH . F 6 HOH A 82 482 41 HOH HOH . F 6 HOH A 83 483 42 HOH HOH . G 6 HOH B 1 1401 89 HOH HOH . G 6 HOH B 2 1402 70 HOH HOH . G 6 HOH B 3 1403 16 HOH HOH . G 6 HOH B 4 1404 18 HOH HOH . G 6 HOH B 5 1405 19 HOH HOH . G 6 HOH B 6 1406 22 HOH HOH . G 6 HOH B 7 1407 83 HOH HOH . G 6 HOH B 8 1408 17 HOH HOH . G 6 HOH B 9 1409 87 HOH HOH . G 6 HOH B 10 1410 23 HOH HOH . G 6 HOH B 11 1411 20 HOH HOH . G 6 HOH B 12 1412 69 HOH HOH . G 6 HOH B 13 1413 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . C 3 43.689 13.789 51.121 1 58.97 ? PG ATP 301 A 1 HETATM 2 O O1G ATP . . . C 3 42.984 14.371 52.325 1 57.94 ? O1G ATP 301 A 1 HETATM 3 O O2G ATP . . . C 3 45.179 13.644 51.323 1 58.6 ? O2G ATP 301 A 1 HETATM 4 O O3G ATP . . . C 3 43.039 12.523 50.618 1 57.77 ? O3G ATP 301 A 1 HETATM 5 P PB ATP . . . C 3 43.956 14.81 48.403 1 54.33 ? PB ATP 301 A 1 HETATM 6 O O1B ATP . . . C 3 44.942 13.702 48.224 1 52.8 ? O1B ATP 301 A 1 HETATM 7 O O2B ATP . . . C 3 42.71 14.84 47.581 1 54.23 ? O2B ATP 301 A 1 HETATM 8 O O3B ATP . . . C 3 43.523 14.869 49.941 1 54.81 ? O3B ATP 301 A 1 HETATM 9 P PA ATP . . . C 3 45.974 16.831 49.022 1 45.2 ? PA ATP 301 A 1 HETATM 10 O O1A ATP . . . C 3 46.9 15.73 49.421 1 45.73 ? O1A ATP 301 A 1 HETATM 11 O O2A ATP . . . C 3 45.459 17.745 50.085 1 44.48 ? O2A ATP 301 A 1 HETATM 12 O O3A ATP . . . C 3 44.726 16.203 48.237 1 48.79 ? O3A ATP 301 A 1 HETATM 13 O O5' ATP . . . C 3 46.648 17.696 47.854 1 41.08 ? O5' ATP 301 A 1 HETATM 14 C C5' ATP . . . C 3 47.103 17.021 46.656 1 38.04 ? C5' ATP 301 A 1 HETATM 15 C C4' ATP . . . C 3 48.426 17.605 46.227 1 36.26 ? C4' ATP 301 A 1 HETATM 16 O O4' ATP . . . C 3 48.304 19.046 46.11 1 35.07 ? O4' ATP 301 A 1 HETATM 17 C C3' ATP . . . C 3 49.602 17.406 47.188 1 35.26 ? C3' ATP 301 A 1 HETATM 18 O O3' ATP . . . C 3 50.202 16.127 47.024 1 34.43 ? O3' ATP 301 A 1 HETATM 19 C C2' ATP . . . C 3 50.521 18.552 46.756 1 34.65 ? C2' ATP 301 A 1 HETATM 20 O O2' ATP . . . C 3 51.251 18.261 45.584 1 34.97 ? O2' ATP 301 A 1 HETATM 21 C C1' ATP . . . C 3 49.51 19.667 46.499 1 33.63 ? C1' ATP 301 A 1 HETATM 22 N N9 ATP . . . C 3 49.254 20.493 47.678 1 31.71 ? N9 ATP 301 A 1 HETATM 23 C C8 ATP . . . C 3 48.492 20.18 48.778 1 30.97 ? C8 ATP 301 A 1 HETATM 24 N N7 ATP . . . C 3 48.479 21.141 49.672 1 29.79 ? N7 ATP 301 A 1 HETATM 25 C C5 ATP . . . C 3 49.281 22.138 49.132 1 29.21 ? C5 ATP 301 A 1 HETATM 26 C C6 ATP . . . C 3 49.665 23.41 49.6 1 28.21 ? C6 ATP 301 A 1 HETATM 27 N N6 ATP . . . C 3 49.278 23.914 50.768 1 27.26 ? N6 ATP 301 A 1 HETATM 28 N N1 ATP . . . C 3 50.48 24.148 48.805 1 28.01 ? N1 ATP 301 A 1 HETATM 29 C C2 ATP . . . C 3 50.867 23.63 47.63 1 28.71 ? C2 ATP 301 A 1 HETATM 30 N N3 ATP . . . C 3 50.572 22.449 47.091 1 29.25 ? N3 ATP 301 A 1 HETATM 31 C C4 ATP . . . C 3 49.765 21.744 47.903 1 30.09 ? C4 ATP 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #