data_7ULE # _model_server_result.job_id AkuIepHVhNsvRT217De9JA _model_server_result.datetime_utc '2024-10-20 19:35:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ule # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 7ULE # _exptl.entry_id 7ULE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ULE _cell.length_a 69.082 _cell.length_b 69.082 _cell.length_c 92.352 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ULE _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 0 0 184.704 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 157 A CYS 155 1_555 A SG CYS 157 A CYS 155 5_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? disulf ? disulf2 A SG CYS 246 A CYS 244 1_555 A SG CYS 246 A CYS 244 5_557 ? A ? ? A ? ? ? ? ? ? ? 2.132 ? disulf ? disulf3 A SG CYS 246 A CYS 244 1_555 A SG CYS 250 A CYS 248 5_557 ? A ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc1 A OD2 ASP 111 A ASP 109 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc2 A OD1 ASP 111 A ASP 109 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc3 A OD1 ASP 152 A ASP 150 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc4 A OG1 THR 153 A THR 151 1_555 D MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc5 A OE1 GLU 210 A GLU 208 1_555 D MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 B O1B GDP . A GDP 301 1_555 D MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc7 B O1A GDP . A GDP 301 1_555 D MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc8 B O2B GDP . A GDP 301 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc9 C O2P F4I . A F4I 302 1_555 F NA NA . A NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc10 D MN MN . A MN 303 1_555 G O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc11 D MN MN . A MN 303 1_555 G O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc12 E MN MN . A MN 304 1_555 G O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? metalc ? metalc13 E MN MN . A MN 304 1_555 G O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc14 E MN MN . A MN 304 1_555 G O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc15 F NA NA . A NA 305 1_555 G O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc16 F NA NA . A NA 305 1_555 G O HOH . A HOH 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc17 F NA NA . A NA 305 1_555 G O HOH . A HOH 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc18 F NA NA . A NA 305 1_555 G O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ULE _atom_sites.fract_transf_matrix[1][1] 0.014476 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014476 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010828 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 301 1 GDP GDP . C 3 F4I A 1 302 1 F4I F4I . D 4 MN A 1 303 1 MN MN . E 4 MN A 1 304 2 MN MN . F 5 NA A 1 305 3 NA NA . G 6 HOH A 1 401 4 HOH HOH . G 6 HOH A 2 402 39 HOH HOH . G 6 HOH A 3 403 70 HOH HOH . G 6 HOH A 4 404 103 HOH HOH . G 6 HOH A 5 405 6 HOH HOH . G 6 HOH A 6 406 91 HOH HOH . G 6 HOH A 7 407 8 HOH HOH . G 6 HOH A 8 408 63 HOH HOH . G 6 HOH A 9 409 98 HOH HOH . G 6 HOH A 10 410 60 HOH HOH . G 6 HOH A 11 411 9 HOH HOH . G 6 HOH A 12 412 27 HOH HOH . G 6 HOH A 13 413 76 HOH HOH . G 6 HOH A 14 414 112 HOH HOH . G 6 HOH A 15 415 10 HOH HOH . G 6 HOH A 16 416 96 HOH HOH . G 6 HOH A 17 417 49 HOH HOH . G 6 HOH A 18 418 36 HOH HOH . G 6 HOH A 19 419 100 HOH HOH . G 6 HOH A 20 420 71 HOH HOH . G 6 HOH A 21 421 11 HOH HOH . G 6 HOH A 22 422 85 HOH HOH . G 6 HOH A 23 423 25 HOH HOH . G 6 HOH A 24 424 107 HOH HOH . G 6 HOH A 25 425 75 HOH HOH . G 6 HOH A 26 426 19 HOH HOH . G 6 HOH A 27 427 33 HOH HOH . G 6 HOH A 28 428 113 HOH HOH . G 6 HOH A 29 429 21 HOH HOH . G 6 HOH A 30 430 136 HOH HOH . G 6 HOH A 31 431 69 HOH HOH . G 6 HOH A 32 432 108 HOH HOH . G 6 HOH A 33 433 79 HOH HOH . G 6 HOH A 34 434 65 HOH HOH . G 6 HOH A 35 435 26 HOH HOH . G 6 HOH A 36 436 82 HOH HOH . G 6 HOH A 37 437 30 HOH HOH . G 6 HOH A 38 438 14 HOH HOH . G 6 HOH A 39 439 128 HOH HOH . G 6 HOH A 40 440 24 HOH HOH . G 6 HOH A 41 441 32 HOH HOH . G 6 HOH A 42 442 95 HOH HOH . G 6 HOH A 43 443 90 HOH HOH . G 6 HOH A 44 444 7 HOH HOH . G 6 HOH A 45 445 101 HOH HOH . G 6 HOH A 46 446 3 HOH HOH . G 6 HOH A 47 447 35 HOH HOH . G 6 HOH A 48 448 116 HOH HOH . G 6 HOH A 49 449 5 HOH HOH . G 6 HOH A 50 450 94 HOH HOH . G 6 HOH A 51 451 110 HOH HOH . G 6 HOH A 52 452 1 HOH HOH . G 6 HOH A 53 453 29 HOH HOH . G 6 HOH A 54 454 102 HOH HOH . G 6 HOH A 55 455 18 HOH HOH . G 6 HOH A 56 456 53 HOH HOH . G 6 HOH A 57 457 88 HOH HOH . G 6 HOH A 58 458 72 HOH HOH . G 6 HOH A 59 459 66 HOH HOH . G 6 HOH A 60 460 73 HOH HOH . G 6 HOH A 61 461 97 HOH HOH . G 6 HOH A 62 462 99 HOH HOH . G 6 HOH A 63 463 2 HOH HOH . G 6 HOH A 64 464 130 HOH HOH . G 6 HOH A 65 465 137 HOH HOH . G 6 HOH A 66 466 58 HOH HOH . G 6 HOH A 67 467 52 HOH HOH . G 6 HOH A 68 468 17 HOH HOH . G 6 HOH A 69 469 104 HOH HOH . G 6 HOH A 70 470 80 HOH HOH . G 6 HOH A 71 471 119 HOH HOH . G 6 HOH A 72 472 114 HOH HOH . G 6 HOH A 73 473 87 HOH HOH . G 6 HOH A 74 474 15 HOH HOH . G 6 HOH A 75 475 64 HOH HOH . G 6 HOH A 76 476 74 HOH HOH . G 6 HOH A 77 477 31 HOH HOH . G 6 HOH A 78 478 51 HOH HOH . G 6 HOH A 79 479 67 HOH HOH . G 6 HOH A 80 480 117 HOH HOH . G 6 HOH A 81 481 16 HOH HOH . G 6 HOH A 82 482 12 HOH HOH . G 6 HOH A 83 483 44 HOH HOH . G 6 HOH A 84 484 43 HOH HOH . G 6 HOH A 85 485 47 HOH HOH . G 6 HOH A 86 486 46 HOH HOH . G 6 HOH A 87 487 81 HOH HOH . G 6 HOH A 88 488 106 HOH HOH . G 6 HOH A 89 489 54 HOH HOH . G 6 HOH A 90 490 89 HOH HOH . G 6 HOH A 91 491 122 HOH HOH . G 6 HOH A 92 492 20 HOH HOH . G 6 HOH A 93 493 86 HOH HOH . G 6 HOH A 94 494 28 HOH HOH . G 6 HOH A 95 495 68 HOH HOH . G 6 HOH A 96 496 92 HOH HOH . G 6 HOH A 97 497 126 HOH HOH . G 6 HOH A 98 498 61 HOH HOH . G 6 HOH A 99 499 77 HOH HOH . G 6 HOH A 100 500 120 HOH HOH . G 6 HOH A 101 501 62 HOH HOH . G 6 HOH A 102 502 109 HOH HOH . G 6 HOH A 103 503 37 HOH HOH . G 6 HOH A 104 504 115 HOH HOH . G 6 HOH A 105 505 45 HOH HOH . G 6 HOH A 106 506 38 HOH HOH . G 6 HOH A 107 507 42 HOH HOH . G 6 HOH A 108 508 78 HOH HOH . G 6 HOH A 109 509 84 HOH HOH . G 6 HOH A 110 510 83 HOH HOH . G 6 HOH A 111 511 13 HOH HOH . G 6 HOH A 112 512 129 HOH HOH . G 6 HOH A 113 513 59 HOH HOH . G 6 HOH A 114 514 105 HOH HOH . G 6 HOH A 115 515 139 HOH HOH . G 6 HOH A 116 516 50 HOH HOH . G 6 HOH A 117 517 140 HOH HOH . G 6 HOH A 118 518 41 HOH HOH . G 6 HOH A 119 519 125 HOH HOH . G 6 HOH A 120 520 111 HOH HOH . G 6 HOH A 121 521 131 HOH HOH . G 6 HOH A 122 522 135 HOH HOH . G 6 HOH A 123 523 134 HOH HOH . G 6 HOH A 124 524 34 HOH HOH . G 6 HOH A 125 525 40 HOH HOH . G 6 HOH A 126 526 22 HOH HOH . G 6 HOH A 127 527 57 HOH HOH . G 6 HOH A 128 528 56 HOH HOH . G 6 HOH A 129 529 93 HOH HOH . G 6 HOH A 130 530 55 HOH HOH . G 6 HOH A 131 531 123 HOH HOH . G 6 HOH A 132 532 127 HOH HOH . G 6 HOH A 133 533 132 HOH HOH . G 6 HOH A 134 534 133 HOH HOH . G 6 HOH A 135 535 23 HOH HOH . G 6 HOH A 136 536 138 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x 14.61 _atom_site.Cartn_y 23.204 _atom_site.Cartn_z 93.01 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.31 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 305 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #