data_7UM2 # _model_server_result.job_id VlWx2N8YLDhVpjgSSXU0Cw _model_server_result.datetime_utc '2025-01-05 02:34:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7um2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7UM2 # _exptl.entry_id 7UM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UM2 _cell.length_a 60.171 _cell.length_b 79.105 _cell.length_c 110.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 125 A CYS 101 1_555 A SG CYS 188 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf2 A SG CYS 227 A CYS 203 1_555 A SG CYS 283 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc1 A NE2 HIS 169 A HIS 145 1_555 D ZN ZN . A ZN 401 3_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc2 A OE1 GLU 178 A GLU 154 1_555 E CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc3 A OE2 GLU 178 A GLU 154 1_555 E CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc4 A O HIS 215 A HIS 191 1_555 E CD CD . A CD 402 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc5 A ND1 HIS 215 A HIS 191 1_555 E CD CD . A CD 402 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc6 A NE2 HIS 221 A HIS 197 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc7 E CD CD . A CD 402 1_555 G O HOH . A HOH 671 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7UM2 _atom_sites.fract_transf_matrix[1][1] 0.016619 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 401 301 ZN ZN . E 5 CD A 1 402 401 CD CD . F 6 NA A 1 403 1 NA NA . G 7 HOH A 1 501 37 HOH HOH . G 7 HOH A 2 502 87 HOH HOH . G 7 HOH A 3 503 22 HOH HOH . G 7 HOH A 4 504 5 HOH HOH . G 7 HOH A 5 505 93 HOH HOH . G 7 HOH A 6 506 284 HOH HOH . G 7 HOH A 7 507 251 HOH HOH . G 7 HOH A 8 508 35 HOH HOH . G 7 HOH A 9 509 59 HOH HOH . G 7 HOH A 10 510 64 HOH HOH . G 7 HOH A 11 511 14 HOH HOH . G 7 HOH A 12 512 66 HOH HOH . G 7 HOH A 13 513 7 HOH HOH . G 7 HOH A 14 514 241 HOH HOH . G 7 HOH A 15 515 227 HOH HOH . G 7 HOH A 16 516 159 HOH HOH . G 7 HOH A 17 517 90 HOH HOH . G 7 HOH A 18 518 183 HOH HOH . G 7 HOH A 19 519 200 HOH HOH . G 7 HOH A 20 520 3 HOH HOH . G 7 HOH A 21 521 131 HOH HOH . G 7 HOH A 22 522 62 HOH HOH . G 7 HOH A 23 523 103 HOH HOH . G 7 HOH A 24 524 202 HOH HOH . G 7 HOH A 25 525 46 HOH HOH . G 7 HOH A 26 526 117 HOH HOH . G 7 HOH A 27 527 181 HOH HOH . G 7 HOH A 28 528 151 HOH HOH . G 7 HOH A 29 529 1 HOH HOH . G 7 HOH A 30 530 275 HOH HOH . G 7 HOH A 31 531 78 HOH HOH . G 7 HOH A 32 532 263 HOH HOH . G 7 HOH A 33 533 247 HOH HOH . G 7 HOH A 34 534 288 HOH HOH . G 7 HOH A 35 535 89 HOH HOH . G 7 HOH A 36 536 96 HOH HOH . G 7 HOH A 37 537 132 HOH HOH . G 7 HOH A 38 538 120 HOH HOH . G 7 HOH A 39 539 116 HOH HOH . G 7 HOH A 40 540 9 HOH HOH . G 7 HOH A 41 541 118 HOH HOH . G 7 HOH A 42 542 91 HOH HOH . G 7 HOH A 43 543 99 HOH HOH . G 7 HOH A 44 544 281 HOH HOH . G 7 HOH A 45 545 39 HOH HOH . G 7 HOH A 46 546 182 HOH HOH . G 7 HOH A 47 547 128 HOH HOH . G 7 HOH A 48 548 11 HOH HOH . G 7 HOH A 49 549 38 HOH HOH . G 7 HOH A 50 550 57 HOH HOH . G 7 HOH A 51 551 28 HOH HOH . G 7 HOH A 52 552 236 HOH HOH . G 7 HOH A 53 553 55 HOH HOH . G 7 HOH A 54 554 249 HOH HOH . G 7 HOH A 55 555 277 HOH HOH . G 7 HOH A 56 556 142 HOH HOH . G 7 HOH A 57 557 149 HOH HOH . G 7 HOH A 58 558 60 HOH HOH . G 7 HOH A 59 559 83 HOH HOH . G 7 HOH A 60 560 43 HOH HOH . G 7 HOH A 61 561 115 HOH HOH . G 7 HOH A 62 562 154 HOH HOH . G 7 HOH A 63 563 272 HOH HOH . G 7 HOH A 64 564 121 HOH HOH . G 7 HOH A 65 565 204 HOH HOH . G 7 HOH A 66 566 61 HOH HOH . G 7 HOH A 67 567 86 HOH HOH . G 7 HOH A 68 568 150 HOH HOH . G 7 HOH A 69 569 45 HOH HOH . G 7 HOH A 70 570 41 HOH HOH . G 7 HOH A 71 571 170 HOH HOH . G 7 HOH A 72 572 24 HOH HOH . G 7 HOH A 73 573 29 HOH HOH . G 7 HOH A 74 574 148 HOH HOH . G 7 HOH A 75 575 268 HOH HOH . G 7 HOH A 76 576 143 HOH HOH . G 7 HOH A 77 577 243 HOH HOH . G 7 HOH A 78 578 255 HOH HOH . G 7 HOH A 79 579 175 HOH HOH . G 7 HOH A 80 580 278 HOH HOH . G 7 HOH A 81 581 137 HOH HOH . G 7 HOH A 82 582 139 HOH HOH . G 7 HOH A 83 583 114 HOH HOH . G 7 HOH A 84 584 212 HOH HOH . G 7 HOH A 85 585 237 HOH HOH . G 7 HOH A 86 586 51 HOH HOH . G 7 HOH A 87 587 81 HOH HOH . G 7 HOH A 88 588 97 HOH HOH . G 7 HOH A 89 589 4 HOH HOH . G 7 HOH A 90 590 26 HOH HOH . G 7 HOH A 91 591 269 HOH HOH . G 7 HOH A 92 592 76 HOH HOH . G 7 HOH A 93 593 271 HOH HOH . G 7 HOH A 94 594 54 HOH HOH . G 7 HOH A 95 595 48 HOH HOH . G 7 HOH A 96 596 285 HOH HOH . G 7 HOH A 97 597 193 HOH HOH . G 7 HOH A 98 598 197 HOH HOH . G 7 HOH A 99 599 240 HOH HOH . G 7 HOH A 100 600 163 HOH HOH . G 7 HOH A 101 601 101 HOH HOH . G 7 HOH A 102 602 157 HOH HOH . G 7 HOH A 103 603 105 HOH HOH . G 7 HOH A 104 604 73 HOH HOH . G 7 HOH A 105 605 65 HOH HOH . G 7 HOH A 106 606 17 HOH HOH . G 7 HOH A 107 607 184 HOH HOH . G 7 HOH A 108 608 10 HOH HOH . G 7 HOH A 109 609 201 HOH HOH . G 7 HOH A 110 610 287 HOH HOH . G 7 HOH A 111 611 52 HOH HOH . G 7 HOH A 112 612 155 HOH HOH . G 7 HOH A 113 613 189 HOH HOH . G 7 HOH A 114 614 171 HOH HOH . G 7 HOH A 115 615 125 HOH HOH . G 7 HOH A 116 616 244 HOH HOH . G 7 HOH A 117 617 178 HOH HOH . G 7 HOH A 118 618 215 HOH HOH . G 7 HOH A 119 619 276 HOH HOH . G 7 HOH A 120 620 2 HOH HOH . G 7 HOH A 121 621 33 HOH HOH . G 7 HOH A 122 622 188 HOH HOH . G 7 HOH A 123 623 30 HOH HOH . G 7 HOH A 124 624 152 HOH HOH . G 7 HOH A 125 625 127 HOH HOH . G 7 HOH A 126 626 92 HOH HOH . G 7 HOH A 127 627 195 HOH HOH . G 7 HOH A 128 628 210 HOH HOH . G 7 HOH A 129 629 79 HOH HOH . G 7 HOH A 130 630 13 HOH HOH . G 7 HOH A 131 631 216 HOH HOH . G 7 HOH A 132 632 20 HOH HOH . G 7 HOH A 133 633 206 HOH HOH . G 7 HOH A 134 634 273 HOH HOH . G 7 HOH A 135 635 186 HOH HOH . G 7 HOH A 136 636 177 HOH HOH . G 7 HOH A 137 637 72 HOH HOH . G 7 HOH A 138 638 172 HOH HOH . G 7 HOH A 139 639 199 HOH HOH . G 7 HOH A 140 640 205 HOH HOH . G 7 HOH A 141 641 254 HOH HOH . G 7 HOH A 142 642 111 HOH HOH . G 7 HOH A 143 643 235 HOH HOH . G 7 HOH A 144 644 77 HOH HOH . G 7 HOH A 145 645 36 HOH HOH . G 7 HOH A 146 646 165 HOH HOH . G 7 HOH A 147 647 144 HOH HOH . G 7 HOH A 148 648 27 HOH HOH . G 7 HOH A 149 649 230 HOH HOH . G 7 HOH A 150 650 173 HOH HOH . G 7 HOH A 151 651 49 HOH HOH . G 7 HOH A 152 652 242 HOH HOH . G 7 HOH A 153 653 191 HOH HOH . G 7 HOH A 154 654 153 HOH HOH . G 7 HOH A 155 655 266 HOH HOH . G 7 HOH A 156 656 141 HOH HOH . G 7 HOH A 157 657 290 HOH HOH . G 7 HOH A 158 658 88 HOH HOH . G 7 HOH A 159 659 25 HOH HOH . G 7 HOH A 160 660 63 HOH HOH . G 7 HOH A 161 661 158 HOH HOH . G 7 HOH A 162 662 169 HOH HOH . G 7 HOH A 163 663 161 HOH HOH . G 7 HOH A 164 664 211 HOH HOH . G 7 HOH A 165 665 239 HOH HOH . G 7 HOH A 166 666 138 HOH HOH . G 7 HOH A 167 667 12 HOH HOH . G 7 HOH A 168 668 6 HOH HOH . G 7 HOH A 169 669 232 HOH HOH . G 7 HOH A 170 670 194 HOH HOH . G 7 HOH A 171 671 56 HOH HOH . G 7 HOH A 172 672 262 HOH HOH . G 7 HOH A 173 673 228 HOH HOH . G 7 HOH A 174 674 226 HOH HOH . G 7 HOH A 175 675 258 HOH HOH . G 7 HOH A 176 676 222 HOH HOH . G 7 HOH A 177 677 15 HOH HOH . G 7 HOH A 178 678 246 HOH HOH . G 7 HOH A 179 679 192 HOH HOH . G 7 HOH A 180 680 256 HOH HOH . G 7 HOH A 181 681 252 HOH HOH . G 7 HOH A 182 682 217 HOH HOH . G 7 HOH A 183 683 218 HOH HOH . G 7 HOH A 184 684 187 HOH HOH . G 7 HOH A 185 685 164 HOH HOH . G 7 HOH A 186 686 174 HOH HOH . G 7 HOH A 187 687 231 HOH HOH . G 7 HOH A 188 688 223 HOH HOH . G 7 HOH A 189 689 224 HOH HOH . G 7 HOH A 190 690 147 HOH HOH . G 7 HOH A 191 691 250 HOH HOH . G 7 HOH A 192 692 102 HOH HOH . G 7 HOH A 193 693 221 HOH HOH . G 7 HOH A 194 694 94 HOH HOH . G 7 HOH A 195 695 203 HOH HOH . G 7 HOH A 196 696 245 HOH HOH . G 7 HOH A 197 697 267 HOH HOH . G 7 HOH A 198 698 70 HOH HOH . G 7 HOH A 199 699 270 HOH HOH . G 7 HOH A 200 700 292 HOH HOH . G 7 HOH A 201 701 208 HOH HOH . G 7 HOH A 202 702 31 HOH HOH . G 7 HOH A 203 703 129 HOH HOH . G 7 HOH A 204 704 229 HOH HOH . H 7 HOH B 1 101 47 HOH HOH . H 7 HOH B 2 102 219 HOH HOH . H 7 HOH B 3 103 40 HOH HOH . H 7 HOH B 4 104 69 HOH HOH . H 7 HOH B 5 105 100 HOH HOH . H 7 HOH B 6 106 16 HOH HOH . H 7 HOH B 7 107 160 HOH HOH . H 7 HOH B 8 108 126 HOH HOH . H 7 HOH B 9 109 84 HOH HOH . H 7 HOH B 10 110 190 HOH HOH . H 7 HOH B 11 111 106 HOH HOH . H 7 HOH B 12 112 109 HOH HOH . H 7 HOH B 13 113 71 HOH HOH . H 7 HOH B 14 114 110 HOH HOH . H 7 HOH B 15 115 34 HOH HOH . H 7 HOH B 16 116 257 HOH HOH . H 7 HOH B 17 117 18 HOH HOH . H 7 HOH B 18 118 282 HOH HOH . H 7 HOH B 19 119 85 HOH HOH . H 7 HOH B 20 120 168 HOH HOH . H 7 HOH B 21 121 140 HOH HOH . H 7 HOH B 22 122 185 HOH HOH . H 7 HOH B 23 123 145 HOH HOH . H 7 HOH B 24 124 124 HOH HOH . H 7 HOH B 25 125 95 HOH HOH . H 7 HOH B 26 126 130 HOH HOH . H 7 HOH B 27 127 19 HOH HOH . H 7 HOH B 28 128 8 HOH HOH . H 7 HOH B 29 129 44 HOH HOH . H 7 HOH B 30 130 213 HOH HOH . H 7 HOH B 31 131 82 HOH HOH . H 7 HOH B 32 132 166 HOH HOH . H 7 HOH B 33 133 286 HOH HOH . H 7 HOH B 34 134 50 HOH HOH . H 7 HOH B 35 135 75 HOH HOH . H 7 HOH B 36 136 112 HOH HOH . H 7 HOH B 37 137 122 HOH HOH . H 7 HOH B 38 138 280 HOH HOH . H 7 HOH B 39 139 80 HOH HOH . H 7 HOH B 40 140 198 HOH HOH . H 7 HOH B 41 141 225 HOH HOH . H 7 HOH B 42 142 74 HOH HOH . H 7 HOH B 43 143 32 HOH HOH . H 7 HOH B 44 144 136 HOH HOH . H 7 HOH B 45 145 209 HOH HOH . H 7 HOH B 46 146 135 HOH HOH . H 7 HOH B 47 147 53 HOH HOH . H 7 HOH B 48 148 23 HOH HOH . H 7 HOH B 49 149 104 HOH HOH . H 7 HOH B 50 150 21 HOH HOH . H 7 HOH B 51 151 133 HOH HOH . H 7 HOH B 52 152 179 HOH HOH . H 7 HOH B 53 153 58 HOH HOH . H 7 HOH B 54 154 123 HOH HOH . H 7 HOH B 55 155 162 HOH HOH . H 7 HOH B 56 156 119 HOH HOH . H 7 HOH B 57 157 207 HOH HOH . H 7 HOH B 58 158 279 HOH HOH . H 7 HOH B 59 159 196 HOH HOH . H 7 HOH B 60 160 176 HOH HOH . H 7 HOH B 61 161 98 HOH HOH . H 7 HOH B 62 162 291 HOH HOH . H 7 HOH B 63 163 108 HOH HOH . H 7 HOH B 64 164 264 HOH HOH . H 7 HOH B 65 165 134 HOH HOH . H 7 HOH B 66 166 156 HOH HOH . H 7 HOH B 67 167 107 HOH HOH . H 7 HOH B 68 168 259 HOH HOH . H 7 HOH B 69 169 283 HOH HOH . H 7 HOH B 70 170 42 HOH HOH . H 7 HOH B 71 171 146 HOH HOH . H 7 HOH B 72 172 248 HOH HOH . H 7 HOH B 73 173 238 HOH HOH . H 7 HOH B 74 174 167 HOH HOH . H 7 HOH B 75 175 214 HOH HOH . H 7 HOH B 76 176 113 HOH HOH . I 7 HOH C 1 101 68 HOH HOH . I 7 HOH C 2 102 274 HOH HOH . I 7 HOH C 3 103 253 HOH HOH . I 7 HOH C 4 104 260 HOH HOH . I 7 HOH C 5 105 67 HOH HOH . I 7 HOH C 6 106 289 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -34.178 _atom_site.Cartn_y 13.137 _atom_site.Cartn_z 2.635 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.49 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #