data_7UMG # _model_server_result.job_id iBmB9h9ddHkEU7krEi1PHA _model_server_result.datetime_utc '2024-11-26 01:20:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7umg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 7UMG # _exptl.entry_id 7UMG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UMG _cell.length_a 166.495 _cell.length_b 166.495 _cell.length_c 166.495 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall 'I 2 2 3' _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 99 A CYS 98 1_555 A SG CYS 162 A CYS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 201 A CYS 200 1_555 A SG CYS 257 A CYS 256 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 A SG CYS 201 A CYS 200 1_555 A SG CYS 257 A CYS 256 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.046 ? disulf ? disulf4 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 C SG CYS 23 C CYS 22 1_555 C SG CYS 95 C CYS 94 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 C SG CYS 23 C CYS 22 1_555 C SG CYS 95 C CYS 94 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 D SG CYS 23 D CYS 22 1_555 D SG CYS 95 D CYS 94 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.028 ? disulf ? disulf8 D SG CYS 23 D CYS 22 1_555 D SG CYS 95 D CYS 94 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.046 ? covale ? covale1 A NZ LYS 44 A LYS 43 1_555 E C9 30W . A 30W 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 285 n n P O2 PO4 sing 286 n n P O3 PO4 sing 287 n n P O4 PO4 sing 288 n n # _atom_sites.entry_id 7UMG _atom_sites.fract_transf_matrix[1][1] 0.006006 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 30W A 1 301 301 30W AFP . F 5 PO4 A 1 302 1 PO4 PO4 . G 6 CL A 1 303 1 CL CL . H 7 HOH A 1 401 2 HOH HOH . H 7 HOH A 2 402 100 HOH HOH . H 7 HOH A 3 403 143 HOH HOH . H 7 HOH A 4 404 117 HOH HOH . H 7 HOH A 5 405 153 HOH HOH . H 7 HOH A 6 406 36 HOH HOH . H 7 HOH A 7 407 151 HOH HOH . H 7 HOH A 8 408 33 HOH HOH . H 7 HOH A 9 409 16 HOH HOH . H 7 HOH A 10 410 23 HOH HOH . H 7 HOH A 11 411 168 HOH HOH . H 7 HOH A 12 412 47 HOH HOH . H 7 HOH A 13 413 8 HOH HOH . H 7 HOH A 14 414 126 HOH HOH . H 7 HOH A 15 415 57 HOH HOH . H 7 HOH A 16 416 96 HOH HOH . H 7 HOH A 17 417 6 HOH HOH . H 7 HOH A 18 418 1 HOH HOH . H 7 HOH A 19 419 84 HOH HOH . H 7 HOH A 20 420 170 HOH HOH . H 7 HOH A 21 421 56 HOH HOH . H 7 HOH A 22 422 7 HOH HOH . H 7 HOH A 23 423 130 HOH HOH . H 7 HOH A 24 424 14 HOH HOH . H 7 HOH A 25 425 41 HOH HOH . H 7 HOH A 26 426 15 HOH HOH . H 7 HOH A 27 427 113 HOH HOH . H 7 HOH A 28 428 158 HOH HOH . H 7 HOH A 29 429 118 HOH HOH . H 7 HOH A 30 430 161 HOH HOH . H 7 HOH A 31 431 3 HOH HOH . H 7 HOH A 32 432 122 HOH HOH . H 7 HOH A 33 433 46 HOH HOH . H 7 HOH A 34 434 49 HOH HOH . H 7 HOH A 35 435 12 HOH HOH . H 7 HOH A 36 436 45 HOH HOH . H 7 HOH A 37 437 101 HOH HOH . H 7 HOH A 38 438 182 HOH HOH . H 7 HOH A 39 439 52 HOH HOH . H 7 HOH A 40 440 160 HOH HOH . H 7 HOH A 41 441 116 HOH HOH . H 7 HOH A 42 442 43 HOH HOH . H 7 HOH A 43 443 53 HOH HOH . H 7 HOH A 44 444 138 HOH HOH . H 7 HOH A 45 445 17 HOH HOH . H 7 HOH A 46 446 34 HOH HOH . H 7 HOH A 47 447 59 HOH HOH . H 7 HOH A 48 448 88 HOH HOH . H 7 HOH A 49 449 44 HOH HOH . H 7 HOH A 50 450 51 HOH HOH . H 7 HOH A 51 451 32 HOH HOH . H 7 HOH A 52 452 73 HOH HOH . H 7 HOH A 53 453 134 HOH HOH . H 7 HOH A 54 454 28 HOH HOH . H 7 HOH A 55 455 69 HOH HOH . H 7 HOH A 56 456 140 HOH HOH . H 7 HOH A 57 457 55 HOH HOH . H 7 HOH A 58 458 25 HOH HOH . H 7 HOH A 59 459 104 HOH HOH . H 7 HOH A 60 460 165 HOH HOH . H 7 HOH A 61 461 98 HOH HOH . H 7 HOH A 62 462 185 HOH HOH . H 7 HOH A 63 463 135 HOH HOH . H 7 HOH A 64 464 27 HOH HOH . H 7 HOH A 65 465 58 HOH HOH . H 7 HOH A 66 466 106 HOH HOH . H 7 HOH A 67 467 86 HOH HOH . H 7 HOH A 68 468 154 HOH HOH . H 7 HOH A 69 469 111 HOH HOH . H 7 HOH A 70 470 92 HOH HOH . H 7 HOH A 71 471 177 HOH HOH . H 7 HOH A 72 472 61 HOH HOH . H 7 HOH A 73 473 94 HOH HOH . H 7 HOH A 74 474 97 HOH HOH . H 7 HOH A 75 475 70 HOH HOH . I 7 HOH B 1 101 30 HOH HOH . I 7 HOH B 2 102 4 HOH HOH . I 7 HOH B 3 103 81 HOH HOH . I 7 HOH B 4 104 65 HOH HOH . I 7 HOH B 5 105 120 HOH HOH . I 7 HOH B 6 106 9 HOH HOH . I 7 HOH B 7 107 171 HOH HOH . I 7 HOH B 8 108 128 HOH HOH . I 7 HOH B 9 109 179 HOH HOH . I 7 HOH B 10 110 11 HOH HOH . I 7 HOH B 11 111 79 HOH HOH . I 7 HOH B 12 112 63 HOH HOH . I 7 HOH B 13 113 19 HOH HOH . I 7 HOH B 14 114 121 HOH HOH . I 7 HOH B 15 115 169 HOH HOH . I 7 HOH B 16 116 85 HOH HOH . I 7 HOH B 17 117 29 HOH HOH . I 7 HOH B 18 118 10 HOH HOH . I 7 HOH B 19 119 91 HOH HOH . I 7 HOH B 20 120 54 HOH HOH . I 7 HOH B 21 121 39 HOH HOH . I 7 HOH B 22 122 132 HOH HOH . I 7 HOH B 23 123 42 HOH HOH . I 7 HOH B 24 124 24 HOH HOH . I 7 HOH B 25 125 178 HOH HOH . I 7 HOH B 26 126 60 HOH HOH . I 7 HOH B 27 127 89 HOH HOH . I 7 HOH B 28 128 68 HOH HOH . I 7 HOH B 29 129 172 HOH HOH . I 7 HOH B 30 130 67 HOH HOH . I 7 HOH B 31 131 66 HOH HOH . I 7 HOH B 32 132 183 HOH HOH . I 7 HOH B 33 133 152 HOH HOH . I 7 HOH B 34 134 150 HOH HOH . I 7 HOH B 35 135 148 HOH HOH . I 7 HOH B 36 136 95 HOH HOH . I 7 HOH B 37 137 176 HOH HOH . J 7 HOH C 1 201 40 HOH HOH . J 7 HOH C 2 202 76 HOH HOH . J 7 HOH C 3 203 155 HOH HOH . J 7 HOH C 4 204 110 HOH HOH . J 7 HOH C 5 205 181 HOH HOH . J 7 HOH C 6 206 167 HOH HOH . J 7 HOH C 7 207 71 HOH HOH . J 7 HOH C 8 208 131 HOH HOH . J 7 HOH C 9 209 62 HOH HOH . K 7 HOH D 1 201 180 HOH HOH . K 7 HOH D 2 202 83 HOH HOH . K 7 HOH D 3 203 31 HOH HOH . K 7 HOH D 4 204 125 HOH HOH . K 7 HOH D 5 205 184 HOH HOH . K 7 HOH D 6 206 133 HOH HOH . K 7 HOH D 7 207 72 HOH HOH . K 7 HOH D 8 208 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 5 24.181 28.655 -41.095 1 78.61 ? P PO4 302 A 1 HETATM 2 O O1 PO4 . . . F 5 24.725 29.755 -41.981 1 69.32 ? O1 PO4 302 A 1 HETATM 3 O O2 PO4 . . . F 5 22.825 28.242 -41.609 1 68.98 ? O2 PO4 302 A 1 HETATM 4 O O3 PO4 . . . F 5 25.114 27.468 -41.142 1 74.66 ? O3 PO4 302 A 1 HETATM 5 O O4 PO4 . . . F 5 24.042 29.138 -39.669 1 71.06 ? O4 PO4 302 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #