data_7UMR
#
_model_server_result.job_id            '_H6zdamcNm8tqYkW0E1ULw' 
_model_server_result.datetime_utc      '2024-11-16 07:29:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7umr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    7UMR 
#
_exptl.entry_id    7UMR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              668.866 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Hexa Vinylpyrrolidone K15' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7UMR 
_cell.length_a            89.511 
_cell.length_b            89.511 
_cell.length_c            131.519 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UMR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    'I 4 2' 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 61 A HIS 41 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? 
metalc ? metalc2 A OE1 GLU 81 A GLU 80 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc3 A OD2 ASP 109 A ASP 108 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? 
metalc ? metalc4 A OD1 ASP 109 A ASP 108 1_555 C MN MN . A MN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
metalc ? metalc5 A OE2 GLU 120 A GLU 119 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? 
metalc ? metalc6 A O ILE 121 A ILE 120 1_555 B MN MN . A MN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? 
metalc ? metalc7 B MN MN . A MN 201 1_555 E O4 NVR . A NVR 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc8 B MN MN . A MN 201 1_555 E O5 NVR . A NVR 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? 
metalc ? metalc9 C MN MN . A MN 202 1_555 E O4 NVR . A NVR 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? 
metalc ? metalc10 C MN MN . A MN 202 1_555 E O1 NVR . A NVR 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc11 C MN MN . A MN 202 1_555 H O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? 
metalc ? metalc12 C MN MN . A MN 202 1_555 H O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? 
#
_chem_comp.formula           'C36 H56 N6 O6' 
_chem_comp.formula_weight    668.866 
_chem_comp.id                QQ4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Hexa Vinylpyrrolidone K15' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-dodecane-1,3,5,7,9,11-hexayl]hexa(pyrrolidin-2-one)" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C21 C20 QQ4 sing 332 n n 
C21 N02 QQ4 sing 333 n n 
C20 C19 QQ4 sing 334 n n 
C19 C42 QQ4 sing 335 n n 
N02 C12 QQ4 sing 336 n n 
N02 C42 QQ4 sing 337 n n 
C12 C11 QQ4 sing 338 n n 
C42 O05 QQ4 doub 339 n n 
C38 C41 QQ4 sing 340 n n 
C38 N07 QQ4 sing 341 n n 
C41 C40 QQ4 sing 342 n n 
C10 C09 QQ4 sing 343 n n 
C11 C01 QQ4 sing 344 n n 
C40 C39 QQ4 sing 345 n n 
N07 C09 QQ4 sing 346 n n 
N07 C39 QQ4 sing 347 n n 
C01 C02 QQ4 sing 348 n n 
C01 N03 QQ4 sing 349 n n 
C08 C09 QQ4 sing 350 n n 
C08 C07 QQ4 sing 351 n n 
C02 C03 QQ4 sing 352 n n 
C39 O07 QQ4 doub 353 n n 
C26 C27 QQ4 sing 354 n n 
C26 N04 QQ4 sing 355 n n 
C22 N03 QQ4 sing 356 n n 
C22 C25 QQ4 sing 357 n n 
N03 C23 QQ4 sing 358 n n 
C06 C07 QQ4 sing 359 n n 
C06 C05 QQ4 sing 360 n n 
C07 N06 QQ4 sing 361 n n 
C27 C28 QQ4 sing 362 n n 
C03 N04 QQ4 sing 363 n n 
C03 C04 QQ4 sing 364 n n 
C25 C24 QQ4 sing 365 n n 
N04 C29 QQ4 sing 366 n n 
C04 C05 QQ4 sing 367 n n 
O04 C30 QQ4 doub 368 n n 
C23 O02 QQ4 doub 369 n n 
C23 C24 QQ4 sing 370 n n 
C05 N05 QQ4 sing 371 n n 
N06 C34 QQ4 sing 372 n n 
N06 C37 QQ4 sing 373 n n 
C34 C35 QQ4 sing 374 n n 
C28 C29 QQ4 sing 375 n n 
C29 O03 QQ4 doub 376 n n 
C30 N05 QQ4 sing 377 n n 
C30 C31 QQ4 sing 378 n n 
N05 C33 QQ4 sing 379 n n 
C37 O06 QQ4 doub 380 n n 
C37 C36 QQ4 sing 381 n n 
C35 C36 QQ4 sing 382 n n 
C31 C32 QQ4 sing 383 n n 
C33 C32 QQ4 sing 384 n n 
C12 H1 QQ4 sing 385 n n 
C12 H2 QQ4 sing 386 n n 
C11 H3 QQ4 sing 387 n n 
C11 H4 QQ4 sing 388 n n 
C10 H5 QQ4 sing 389 n n 
C10 H6 QQ4 sing 390 n n 
C10 H7 QQ4 sing 391 n n 
C01 H8 QQ4 sing 392 n n 
C02 H9 QQ4 sing 393 n n 
C02 H10 QQ4 sing 394 n n 
C03 H11 QQ4 sing 395 n n 
C04 H12 QQ4 sing 396 n n 
C04 H13 QQ4 sing 397 n n 
C05 H14 QQ4 sing 398 n n 
C06 H15 QQ4 sing 399 n n 
C06 H16 QQ4 sing 400 n n 
C07 H17 QQ4 sing 401 n n 
C08 H18 QQ4 sing 402 n n 
C08 H19 QQ4 sing 403 n n 
C09 H20 QQ4 sing 404 n n 
C19 H21 QQ4 sing 405 n n 
C19 H22 QQ4 sing 406 n n 
C20 H23 QQ4 sing 407 n n 
C20 H24 QQ4 sing 408 n n 
C21 H25 QQ4 sing 409 n n 
C21 H26 QQ4 sing 410 n n 
C22 H27 QQ4 sing 411 n n 
C22 H28 QQ4 sing 412 n n 
C24 H29 QQ4 sing 413 n n 
C24 H30 QQ4 sing 414 n n 
C25 H31 QQ4 sing 415 n n 
C25 H32 QQ4 sing 416 n n 
C26 H33 QQ4 sing 417 n n 
C26 H34 QQ4 sing 418 n n 
C27 H35 QQ4 sing 419 n n 
C27 H36 QQ4 sing 420 n n 
C28 H37 QQ4 sing 421 n n 
C28 H38 QQ4 sing 422 n n 
C31 H39 QQ4 sing 423 n n 
C31 H40 QQ4 sing 424 n n 
C32 H41 QQ4 sing 425 n n 
C32 H42 QQ4 sing 426 n n 
C33 H43 QQ4 sing 427 n n 
C33 H44 QQ4 sing 428 n n 
C34 H45 QQ4 sing 429 n n 
C34 H46 QQ4 sing 430 n n 
C35 H47 QQ4 sing 431 n n 
C35 H48 QQ4 sing 432 n n 
C36 H49 QQ4 sing 433 n n 
C36 H50 QQ4 sing 434 n n 
C38 H51 QQ4 sing 435 n n 
C38 H52 QQ4 sing 436 n n 
C40 H53 QQ4 sing 437 n n 
C40 H54 QQ4 sing 438 n n 
C41 H55 QQ4 sing 439 n n 
C41 H56 QQ4 sing 440 n n 
#
_atom_sites.entry_id                     7UMR 
_atom_sites.fract_transf_matrix[1][1]    0.011172 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011172 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007603 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 201 201 MN MN . 
C 2 MN A 1 202 202 MN MN . 
D 3 QQ4 A 1 203 401 QQ4 PVP . 
E 4 NVR A 1 204 402 NVR C19 . 
F 5 SO4 A 1 205 1 SO4 SO4 . 
G 5 SO4 A 1 206 2 SO4 SO4 . 
H 6 HOH A 1 301 16 HOH HOH . 
H 6 HOH A 2 302 17 HOH HOH . 
H 6 HOH A 3 303 7 HOH HOH . 
H 6 HOH A 4 304 9 HOH HOH . 
H 6 HOH A 5 305 10 HOH HOH . 
H 6 HOH A 6 306 1 HOH HOH . 
H 6 HOH A 7 307 2 HOH HOH . 
H 6 HOH A 8 308 5 HOH HOH . 
H 6 HOH A 9 309 13 HOH HOH . 
H 6 HOH A 10 310 8 HOH HOH . 
H 6 HOH A 11 311 3 HOH HOH . 
H 6 HOH A 12 312 4 HOH HOH . 
H 6 HOH A 13 313 11 HOH HOH . 
H 6 HOH A 14 314 12 HOH HOH . 
H 6 HOH A 15 315 14 HOH HOH . 
H 6 HOH A 16 316 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 QQ4 . . . D 3 36.62 42.457 -12.293 1 107.27 ? C11 QQ4 203 A 1 
HETATM 2 C C10 QQ4 . . . D 3 31.674 48.471 -11.419 1 87.08 ? C10 QQ4 203 A 1 
HETATM 3 C C01 QQ4 . . . D 3 35.429 41.647 -12.79 1 115.74 ? C01 QQ4 203 A 1 
HETATM 4 C C02 QQ4 . . . D 3 34.179 42.053 -12.008 1 107.26 ? C02 QQ4 203 A 1 
HETATM 5 C C03 QQ4 . . . D 3 32.978 42.209 -12.943 1 113.38 ? C03 QQ4 203 A 1 
HETATM 6 C C04 QQ4 . . . D 3 31.812 42.801 -12.143 1 106.78 ? C04 QQ4 203 A 1 
HETATM 7 C C05 QQ4 . . . D 3 31.211 44.032 -12.828 1 100.28 ? C05 QQ4 203 A 1 
HETATM 8 C C06 QQ4 . . . D 3 30.13 44.622 -11.904 1 97.1 ? C06 QQ4 203 A 1 
HETATM 9 C C07 QQ4 . . . D 3 30.189 46.144 -11.745 1 106.39 ? C07 QQ4 203 A 1 
HETATM 10 C C08 QQ4 . . . D 3 30.591 46.469 -10.304 1 98.97 ? C08 QQ4 203 A 1 
HETATM 11 C C09 QQ4 . . . D 3 31.064 47.92 -10.127 1 94.33 ? C09 QQ4 203 A 1 
HETATM 12 C C22 QQ4 . . . D 3 35.886 39.266 -13.694 1 114.16 ? C22 QQ4 203 A 1 
HETATM 13 C C23 QQ4 . . . D 3 35.831 39.518 -11.334 1 113.78 ? C23 QQ4 203 A 1 
HETATM 14 C C24 QQ4 . . . D 3 36.115 38.045 -11.634 1 105.86 ? C24 QQ4 203 A 1 
HETATM 15 C C25 QQ4 . . . D 3 36.594 38.069 -13.074 1 113 ? C25 QQ4 203 A 1 
HETATM 16 C C26 QQ4 . . . D 3 32.561 40.607 -14.912 1 92.46 ? C26 QQ4 203 A 1 
HETATM 17 C C27 QQ4 . . . D 3 32.532 39.079 -15.012 1 80.69 ? C27 QQ4 203 A 1 
HETATM 18 C C28 QQ4 . . . D 3 31.901 38.622 -13.7 1 93.21 ? C28 QQ4 203 A 1 
HETATM 19 C C29 QQ4 . . . D 3 32.207 39.751 -12.732 1 113.19 ? C29 QQ4 203 A 1 
HETATM 20 C C30 QQ4 . . . D 3 33.349 45.508 -12.369 1 123.94 ? C30 QQ4 203 A 1 
HETATM 21 C C31 QQ4 . . . D 3 34.169 46.462 -13.217 1 113.97 ? C31 QQ4 203 A 1 
HETATM 22 C C32 QQ4 . . . D 3 33.247 46.826 -14.35 1 98.85 ? C32 QQ4 203 A 1 
HETATM 23 C C33 QQ4 . . . D 3 32.388 45.581 -14.546 1 96.2 ? C33 QQ4 203 A 1 
HETATM 24 C C34 QQ4 . . . D 3 27.62 46.396 -11.298 1 86.14 ? C34 QQ4 203 A 1 
HETATM 25 C C35 QQ4 . . . D 3 26.503 46.905 -12.218 1 82.45 ? C35 QQ4 203 A 1 
HETATM 26 C C36 QQ4 . . . D 3 27.113 48.016 -13.007 1 85.18 ? C36 QQ4 203 A 1 
HETATM 27 C C37 QQ4 . . . D 3 28.578 47.696 -13.064 1 96.19 ? C37 QQ4 203 A 1 
HETATM 28 C C38 QQ4 . . . D 3 29.436 49.914 -10.436 1 84.77 ? C38 QQ4 203 A 1 
HETATM 29 C C39 QQ4 . . . D 3 29.191 48.603 -8.473 1 104.58 ? C39 QQ4 203 A 1 
HETATM 30 C C40 QQ4 . . . D 3 28.139 49.703 -8.428 1 99.89 ? C40 QQ4 203 A 1 
HETATM 31 C C41 QQ4 . . . D 3 28.658 50.732 -9.409 1 98.05 ? C41 QQ4 203 A 1 
HETATM 32 N N03 QQ4 . . . D 3 35.701 40.226 -12.61 1 125.93 ? N03 QQ4 203 A 1 
HETATM 33 N N04 QQ4 . . . D 3 32.604 40.92 -13.491 1 118.46 ? N04 QQ4 203 A 1 
HETATM 34 N N05 QQ4 . . . D 3 32.253 44.987 -13.204 1 116.43 ? N05 QQ4 203 A 1 
HETATM 35 N N06 QQ4 . . . D 3 28.884 46.712 -12.022 1 93.79 ? N06 QQ4 203 A 1 
HETATM 36 N N07 QQ4 . . . D 3 29.961 48.762 -9.703 1 105.49 ? N07 QQ4 203 A 1 
HETATM 37 O O02 QQ4 . . . D 3 35.74 39.993 -10.251 1 123.26 ? O02 QQ4 203 A 1 
HETATM 38 O O03 QQ4 . . . D 3 32.137 39.673 -11.551 1 118.4 ? O03 QQ4 203 A 1 
HETATM 39 O O04 QQ4 . . . D 3 33.554 45.247 -11.23 1 111.79 ? O04 QQ4 203 A 1 
HETATM 40 O O06 QQ4 . . . D 3 29.36 48.164 -13.823 1 90.42 ? O06 QQ4 203 A 1 
HETATM 41 O O07 QQ4 . . . D 3 29.355 47.771 -7.65 1 95.98 ? O07 QQ4 203 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           41 
#