data_7UNA # _model_server_result.job_id 78KoewRvFBwwczFXFkmaLA _model_server_result.datetime_utc '2024-12-18 07:14:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7una # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 7UNA # _exptl.entry_id 7UNA _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 674.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UNA _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UNA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C20 H24 N10 O13 P2' _chem_comp.formula_weight 674.411 _chem_comp.id 4BW _chem_comp.mon_nstd_flag . _chem_comp.name "2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "3',3' cGAMP;c-GMP-AMP;c[G(3',5')pA(3',5')p]" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CBA 4BW sing 1 n n CBA NAS 4BW doub 2 n n CBA NAT 4BW sing 3 n n NAS CBG 4BW sing 4 n n NAT CBC 4BW sing 5 n n OAG CBI 4BW sing 6 n n CBG NBQ 4BW sing 7 n y CBG CBE 4BW doub 8 n y CBC CBE 4BW sing 9 n n CBC OAC 4BW doub 10 n n OAI PBS 4BW doub 11 n n CBI CBO 4BW sing 12 n n CBI CBM 4BW sing 13 n n CBO NBQ 4BW sing 14 n n CBO OAX 4BW sing 15 n n NBQ CAL 4BW sing 16 n y CBE NAR 4BW sing 17 n y OAE PBS 4BW sing 18 n n OAX CBK 4BW sing 19 n n PBS OAZ 4BW sing 20 n n PBS O5' 4BW sing 21 n n OAZ CBM 4BW sing 22 n n CBM CBK 4BW sing 23 n n CAL NAR 4BW doub 24 n y CBK CAN 4BW sing 25 n n N6 C6 4BW sing 26 n n N7 C8 4BW doub 27 n y N7 C5 4BW sing 28 n y O5' C5' 4BW sing 29 n n C8 N9 4BW sing 30 n y C6 C5 4BW doub 31 n y C6 N1 4BW sing 32 n y C5 C4 4BW sing 33 n y CAN OAV 4BW sing 34 n n C5' C4' 4BW sing 35 n n OAV PBR 4BW sing 36 n n N9 C4 4BW sing 37 n y N9 C1' 4BW sing 38 n n N1 C2 4BW doub 39 n y C4 N3 4BW doub 40 n y O4' C4' 4BW sing 41 n n O4' C1' 4BW sing 42 n n C4' C3' 4BW sing 43 n n C3' C2' 4BW sing 44 n n C3' O3' 4BW sing 45 n n C1' C2' 4BW sing 46 n n C2 N3 4BW sing 47 n y PBR OAD 4BW doub 48 n n PBR O3' 4BW sing 49 n n PBR OAH 4BW sing 50 n n C2' O2' 4BW sing 51 n n NAT H1 4BW sing 52 n n NAA H2 4BW sing 53 n n NAA H3 4BW sing 54 n n CAL H4 4BW sing 55 n n CBO H5 4BW sing 56 n n CBI H6 4BW sing 57 n n OAG H7 4BW sing 58 n n CBK H8 4BW sing 59 n n CAN H9 4BW sing 60 n n CAN H10 4BW sing 61 n n OAH H11 4BW sing 62 n n CBM H12 4BW sing 63 n n OAE H13 4BW sing 64 n n C5' H14 4BW sing 65 n n C5' H15 4BW sing 66 n n C4' H16 4BW sing 67 n n C3' H17 4BW sing 68 n n C2' H18 4BW sing 69 n n O2' H19 4BW sing 70 n n C1' H20 4BW sing 71 n n C8 H21 4BW sing 72 n n C2 H22 4BW sing 73 n n N6 H23 4BW sing 74 n n N6 H24 4BW sing 75 n n # _atom_sites.entry_id 7UNA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 4BW A 1 401 1 4BW LIG . J 2 4BW C 1 401 2 4BW LIG . K 2 4BW F 1 401 3 4BW LIG . L 2 4BW H 1 401 4 4BW LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAC 4BW . . . I 2 168.965 97.579 181.024 0.47 71.5 ? OAC 4BW 401 A 1 HETATM 2 C CBC 4BW . . . I 2 170.03 98.402 180.617 0.47 71.5 ? CBC 4BW 401 A 1 HETATM 3 N NAT 4BW . . . I 2 171.293 98.11 180.97 0.47 71.5 ? NAT 4BW 401 A 1 HETATM 4 C CBA 4BW . . . I 2 172.293 98.88 180.588 0.47 71.5 ? CBA 4BW 401 A 1 HETATM 5 N NAA 4BW . . . I 2 173.728 98.517 181.011 0.47 71.5 ? NAA 4BW 401 A 1 HETATM 6 N NAS 4BW . . . I 2 172.085 99.975 179.841 0.47 71.5 ? NAS 4BW 401 A 1 HETATM 7 C CBG 4BW . . . I 2 170.853 100.335 179.448 0.47 71.5 ? CBG 4BW 401 A 1 HETATM 8 C CBE 4BW . . . I 2 169.778 99.545 179.832 0.47 71.5 ? CBE 4BW 401 A 1 HETATM 9 N NAR 4BW . . . I 2 168.661 100.11 179.317 0.47 71.5 ? NAR 4BW 401 A 1 HETATM 10 C CAL 4BW . . . I 2 169.013 101.198 178.645 0.47 71.5 ? CAL 4BW 401 A 1 HETATM 11 N NBQ 4BW . . . I 2 170.341 101.343 178.721 0.47 71.5 ? NBQ 4BW 401 A 1 HETATM 12 C CBO 4BW . . . I 2 171.11 102.397 178.118 0.47 71.5 ? CBO 4BW 401 A 1 HETATM 13 C CBI 4BW . . . I 2 171.445 101.985 176.555 0.47 71.5 ? CBI 4BW 401 A 1 HETATM 14 O OAG 4BW . . . I 2 172.75 102.504 176.166 0.47 71.5 ? OAG 4BW 401 A 1 HETATM 15 O OAX 4BW . . . I 2 170.425 103.504 178.091 0.47 71.5 ? OAX 4BW 401 A 1 HETATM 16 C CBK 4BW . . . I 2 170.346 103.912 176.593 0.47 71.5 ? CBK 4BW 401 A 1 HETATM 17 C CAN 4BW . . . I 2 169.142 104.478 176.294 0.47 71.5 ? CAN 4BW 401 A 1 HETATM 18 O OAV 4BW . . . I 2 168.202 103.974 177.149 0.47 71.5 ? OAV 4BW 401 A 1 HETATM 19 P PBR 4BW . . . I 2 166.615 103.921 176.62 0.47 71.5 ? PBR 4BW 401 A 1 HETATM 20 O O3' 4BW . . . I 2 166.477 103.605 175.005 0.47 71.5 ? O3' 4BW 401 A 1 HETATM 21 O OAH 4BW . . . I 2 165.722 103.08 177.481 0.47 71.5 ? OAH 4BW 401 A 1 HETATM 22 O OAD 4BW . . . I 2 166.099 105.324 176.787 0.47 71.5 ? OAD 4BW 401 A 1 HETATM 23 C CBM 4BW . . . I 2 170.516 102.549 175.861 0.47 71.5 ? CBM 4BW 401 A 1 HETATM 24 O OAZ 4BW . . . I 2 170.949 102.743 174.435 0.47 71.5 ? OAZ 4BW 401 A 1 HETATM 25 P PBS 4BW . . . I 2 170.539 101.561 173.345 0.47 71.5 ? PBS 4BW 401 A 1 HETATM 26 O OAI 4BW . . . I 2 171.209 101.687 172.049 0.47 71.5 ? OAI 4BW 401 A 1 HETATM 27 O OAE 4BW . . . I 2 171.086 100.29 173.939 0.47 71.5 ? OAE 4BW 401 A 1 HETATM 28 O O5' 4BW . . . I 2 168.883 101.301 173.238 0.47 71.5 ? O5' 4BW 401 A 1 HETATM 29 C C5' 4BW . . . I 2 168.085 102.335 172.765 0.47 71.5 ? C5' 4BW 401 A 1 HETATM 30 C C4' 4BW . . . I 2 166.711 102.115 173.249 0.47 71.5 ? C4' 4BW 401 A 1 HETATM 31 O O4' 4BW . . . I 2 166.214 100.574 172.928 0.47 71.5 ? O4' 4BW 401 A 1 HETATM 32 C C3' 4BW . . . I 2 166.67 102.201 174.565 0.47 71.5 ? C3' 4BW 401 A 1 HETATM 33 C C2' 4BW . . . I 2 165.446 101.345 174.958 0.47 71.5 ? C2' 4BW 401 A 1 HETATM 34 O O2' 4BW . . . I 2 164.363 102.127 175.144 0.47 71.5 ? O2' 4BW 401 A 1 HETATM 35 C C1' 4BW . . . I 2 165.217 100.369 173.732 0.47 71.5 ? C1' 4BW 401 A 1 HETATM 36 N N9 4BW . . . I 2 165.207 98.953 174.231 0.47 71.5 ? N9 4BW 401 A 1 HETATM 37 C C8 4BW . . . I 2 166.222 98.099 174.198 0.47 71.5 ? C8 4BW 401 A 1 HETATM 38 N N7 4BW . . . I 2 165.848 96.934 174.733 0.47 71.5 ? N7 4BW 401 A 1 HETATM 39 C C5 4BW . . . I 2 164.556 97.054 175.12 0.47 71.5 ? C5 4BW 401 A 1 HETATM 40 C C4 4BW . . . I 2 164.142 98.333 174.805 0.47 71.5 ? C4 4BW 401 A 1 HETATM 41 N N3 4BW . . . I 2 162.871 98.704 175.095 0.47 71.5 ? N3 4BW 401 A 1 HETATM 42 C C2 4BW . . . I 2 162.012 97.87 175.674 0.47 71.5 ? C2 4BW 401 A 1 HETATM 43 N N1 4BW . . . I 2 162.387 96.643 175.982 0.47 71.5 ? N1 4BW 401 A 1 HETATM 44 C C6 4BW . . . I 2 163.624 96.19 175.732 0.47 71.5 ? C6 4BW 401 A 1 HETATM 45 N N6 4BW . . . I 2 163.999 94.831 176.087 0.47 71.5 ? N6 4BW 401 A 1 HETATM 46 H H2 4BW . . . I 2 173.942 98.294 182.025 0.47 71.5 ? H2 4BW 401 A 1 HETATM 47 H H3 4BW . . . I 2 174.454 98.492 180.332 0.47 71.5 ? H3 4BW 401 A 1 HETATM 48 H H4 4BW . . . I 2 168.34 101.85 178.129 0.47 71.5 ? H4 4BW 401 A 1 HETATM 49 H H5 4BW . . . I 2 171.996 102.544 178.64 0.47 71.5 ? H5 4BW 401 A 1 HETATM 50 H H6 4BW . . . I 2 171.407 100.927 176.432 0.47 71.5 ? H6 4BW 401 A 1 HETATM 51 H H7 4BW . . . I 2 173.451 101.8 176.319 0.47 71.5 ? H7 4BW 401 A 1 HETATM 52 H H8 4BW . . . I 2 171.15 104.571 176.344 0.47 71.5 ? H8 4BW 401 A 1 HETATM 53 H H9 4BW . . . I 2 169.2 105.513 176.404 0.47 71.5 ? H9 4BW 401 A 1 HETATM 54 H H10 4BW . . . I 2 168.865 104.228 175.242 0.47 71.5 ? H10 4BW 401 A 1 HETATM 55 H H12 4BW . . . I 2 169.626 101.991 175.91 0.47 71.5 ? H12 4BW 401 A 1 HETATM 56 H H14 4BW . . . I 2 168.098 102.341 171.686 0.47 71.5 ? H14 4BW 401 A 1 HETATM 57 H H15 4BW . . . I 2 168.458 103.294 173.147 0.47 71.5 ? H15 4BW 401 A 1 HETATM 58 H H16 4BW . . . I 2 166.01 102.848 172.791 0.47 71.5 ? H16 4BW 401 A 1 HETATM 59 H H17 4BW . . . I 2 167.577 101.783 175.001 0.47 71.5 ? H17 4BW 401 A 1 HETATM 60 H H18 4BW . . . I 2 165.655 100.796 175.819 0.47 71.5 ? H18 4BW 401 A 1 HETATM 61 H H19 4BW . . . I 2 164.111 102.117 176.099 0.47 71.5 ? H19 4BW 401 A 1 HETATM 62 H H20 4BW . . . I 2 164.256 100.607 173.221 0.47 71.5 ? H20 4BW 401 A 1 HETATM 63 H H21 4BW . . . I 2 167.215 98.316 173.793 0.47 71.5 ? H21 4BW 401 A 1 HETATM 64 H H22 4BW . . . I 2 160.989 98.203 175.895 0.47 71.5 ? H22 4BW 401 A 1 HETATM 65 H H23 4BW . . . I 2 164.574 94.285 175.463 0.47 71.5 ? H23 4BW 401 A 1 HETATM 66 H H24 4BW . . . I 2 163.681 94.435 176.957 0.47 71.5 ? H24 4BW 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 93 _model_server_stats.query_time_ms 594 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 66 #