data_7UNF # _model_server_result.job_id cLRd5q3axMD8bIhEjiXY_A _model_server_result.datetime_utc '2024-10-26 14:23:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7unf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"YA","auth_seq_id":303}' # _entry.id 7UNF # _exptl.entry_id 7UNF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 22 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 33-meric _pdbx_struct_assembly.oligomeric_count 33 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 22 QA N N ? 22 RA N N ? 22 SA N N ? 22 TA N N ? 22 UA N N ? 22 VA N N ? 22 WA N N ? 22 XA N N ? 22 YA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 18 oligosaccharide 19 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 18 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 18 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 18 4 3 MAN BMA C1 O1 . O3 HO3 . sing 4 ? 18 5 4 MAN MAN C1 O1 . O2 HO2 . sing 5 ? 18 6 5 MAN MAN C1 O1 . O2 HO2 . sing 6 ? 18 7 6 GLC MAN C1 O1 . O3 HO3 . sing 7 ? 18 8 7 GLC GLC C1 O1 . O3 HO3 . sing 8 ? 19 2 1 MAN MAN C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 18 n HA NAG 1 t 1 NAG t 1 NAG 18 n HA NAG 2 t 2 NAG t 2 NAG 18 n HA BMA 3 t 3 BMA t 3 BMA 18 n HA MAN 4 t 4 MAN t 4 MAN 18 n HA MAN 5 t 5 MAN t 5 MAN 18 n HA MAN 6 t 6 MAN t 6 MAN 18 n HA GLC 7 t 7 GLC t 7 GLC 18 n HA GLC 8 t 8 GLC t 8 GLC 19 n IA MAN 1 w 1 MAN w 1 MAN 19 n IA MAN 2 w 2 MAN w 2 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 V SG CYS 371 s CYS 371 1_555 V SG CYS 418 s CYS 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 V ND2 ASN 261 s ASN 261 1_555 PA C1 NAG . s NAG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.577 ? covale ? covale2 V ND2 ASN 273 s ASN 273 1_555 KA C1 NAG . s NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale3 V ND2 ASN 296 s ASN 296 1_555 LA C1 NAG . s NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.465 ? covale ? covale4 V ND2 ASN 303 s ASN 303 1_555 MA C1 NAG . s NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale5 V ND2 ASN 357 s ASN 357 1_555 OA C1 NAG . s NAG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.541 ? covale ? covale6 HA O4 NAG . t NAG 1 1_555 HA C1 NAG . t NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale7 HA O4 NAG . t NAG 2 1_555 HA C1 BMA . t BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale8 HA O3 BMA . t BMA 3 1_555 HA C1 MAN . t MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale9 HA O2 MAN . t MAN 4 1_555 HA C1 MAN . t MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale10 HA O2 MAN . t MAN 5 1_555 HA C1 MAN . t MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale11 HA O3 MAN . t MAN 6 1_555 HA C1 GLC . t GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale12 HA O3 GLC . t GLC 7 1_555 HA C1 GLC . t GLC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale13 IA O6 MAN . w MAN 1 1_555 IA C1 MAN . w MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # _atom_sites.entry_id 7UNF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code JA 20 ADP M 1 701 701 ADP ADP . KA 21 NAG s 1 501 503 NAG NAG . LA 21 NAG s 1 502 504 NAG NAG . MA 21 NAG s 1 503 505 NAG NAG . NA 21 NAG s 1 504 506 NAG NAG . OA 21 NAG s 1 505 507 NAG NAG . PA 21 NAG s 1 506 509 NAG NAG . QA 22 POV s 1 507 399 POV POV . RA 22 POV s 1 508 601 POV POV . SA 22 POV r 1 401 401 POV POV . TA 22 POV r 1 402 501 POV POV . UA 22 POV r 1 403 702 POV POV . VA 22 POV 8 1 201 499 POV POV . WA 22 POV 1 1 301 301 POV POV . XA 22 POV 1 1 302 500 POV POV . YA 22 POV 1 1 303 701 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . YA 22 254.06 178.823 160.094 1 25.72 ? N POV 303 1 1 HETATM 2 P P POV . . . YA 22 258.143 177.582 160.013 1 25.72 ? P POV 303 1 1 HETATM 3 C C1 POV . . . YA 22 260.148 177.742 158.306 1 25.72 ? C1 POV 303 1 1 HETATM 4 C C2 POV . . . YA 22 260.705 176.686 157.364 1 25.72 ? C2 POV 303 1 1 HETATM 5 C C3 POV . . . YA 22 262.029 177.154 156.761 1 25.72 ? C3 POV 303 1 1 HETATM 6 C C210 POV . . . YA 22 266.593 171.799 151.043 1 25.72 ? C210 POV 303 1 1 HETATM 7 C C310 POV . . . YA 22 272.022 181.19 153.192 1 25.72 ? C310 POV 303 1 1 HETATM 8 C C11 POV . . . YA 22 256.27 179.144 158.991 1 25.72 ? C11 POV 303 1 1 HETATM 9 O O11 POV . . . YA 22 259.596 177.093 159.411 1 25.72 ? O11 POV 303 1 1 HETATM 10 C C211 POV . . . YA 22 266.586 172.01 149.532 1 25.72 ? C211 POV 303 1 1 HETATM 11 C C12 POV . . . YA 22 255.451 179.216 160.282 1 25.72 ? C12 POV 303 1 1 HETATM 12 O O12 POV . . . YA 22 257.625 178.97 159.289 1 25.72 ? O12 POV 303 1 1 HETATM 13 C C212 POV . . . YA 22 267.79 171.299 148.917 1 25.72 ? C212 POV 303 1 1 HETATM 14 C C13 POV . . . YA 22 253.426 178.74 161.399 1 25.72 ? C13 POV 303 1 1 HETATM 15 O O13 POV . . . YA 22 257.181 176.488 159.896 1 25.72 ? O13 POV 303 1 1 HETATM 16 C C14 POV . . . YA 22 253.942 177.522 159.456 1 25.72 ? C14 POV 303 1 1 HETATM 17 O O14 POV . . . YA 22 258.219 177.763 161.46 1 25.72 ? O14 POV 303 1 1 HETATM 18 C C15 POV . . . YA 22 253.383 179.825 159.288 1 25.72 ? C15 POV 303 1 1 HETATM 19 C C21 POV . . . YA 22 258.932 175.366 156.539 1 25.72 ? C21 POV 303 1 1 HETATM 20 O O21 POV . . . YA 22 259.794 176.446 156.33 1 25.72 ? O21 POV 303 1 1 HETATM 21 C C22 POV . . . YA 22 259.151 174.041 155.812 1 25.72 ? C22 POV 303 1 1 HETATM 22 O O22 POV . . . YA 22 258.016 175.475 157.281 1 25.72 ? O22 POV 303 1 1 HETATM 23 C C23 POV . . . YA 22 260.092 174.227 154.625 1 25.72 ? C23 POV 303 1 1 HETATM 24 C C24 POV . . . YA 22 259.963 173.03 153.688 1 25.72 ? C24 POV 303 1 1 HETATM 25 C C25 POV . . . YA 22 261.35 172.483 153.359 1 25.72 ? C25 POV 303 1 1 HETATM 26 C C26 POV . . . YA 22 261.891 173.128 152.084 1 25.72 ? C26 POV 303 1 1 HETATM 27 C C27 POV . . . YA 22 262.758 172.105 151.348 1 25.72 ? C27 POV 303 1 1 HETATM 28 C C28 POV . . . YA 22 264.171 172.646 151.125 1 25.72 ? C28 POV 303 1 1 HETATM 29 C C29 POV . . . YA 22 265.197 171.64 151.648 1 25.72 ? C29 POV 303 1 1 HETATM 30 C C31 POV . . . YA 22 263.623 178.814 157.064 1 25.72 ? C31 POV 303 1 1 HETATM 31 O O31 POV . . . YA 22 262.263 178.51 156.986 1 25.72 ? O31 POV 303 1 1 HETATM 32 C C32 POV . . . YA 22 264.223 179.963 156.271 1 25.72 ? C32 POV 303 1 1 HETATM 33 O O32 POV . . . YA 22 264.329 178.171 157.754 1 25.72 ? O32 POV 303 1 1 HETATM 34 C C33 POV . . . YA 22 265.398 180.541 157.053 1 25.72 ? C33 POV 303 1 1 HETATM 35 C C34 POV . . . YA 22 266.699 180.226 156.328 1 25.72 ? C34 POV 303 1 1 HETATM 36 C C35 POV . . . YA 22 267.478 181.512 156.071 1 25.72 ? C35 POV 303 1 1 HETATM 37 C C36 POV . . . YA 22 267.753 181.643 154.577 1 25.72 ? C36 POV 303 1 1 HETATM 38 C C37 POV . . . YA 22 269.245 181.841 154.326 1 25.72 ? C37 POV 303 1 1 HETATM 39 C C38 POV . . . YA 22 269.564 181.477 152.88 1 25.72 ? C38 POV 303 1 1 HETATM 40 C C39 POV . . . YA 22 270.941 182.011 152.501 1 25.72 ? C39 POV 303 1 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 149 _model_server_stats.query_time_ms 364 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 40 #