data_7UP6 # _model_server_result.job_id DLbr6jcc25XsLKcbZXAPuw _model_server_result.datetime_utc '2024-12-02 01:11:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7up6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":900}' # _entry.id 7UP6 # _exptl.entry_id 7UP6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 291.307 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(E)-3-(3-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)phenyl)-2-cyanoacrylamide bound form' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7UP6 _cell.length_a 71.17 _cell.length_b 71.17 _cell.length_c 144.84 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 28 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 440 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C04 _struct_conn.ptnr2_label_comp_id SUU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SUU _struct_conn.ptnr2_auth_seq_id 900 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.902 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C16 H13 N5 O' _chem_comp.formula_weight 291.307 _chem_comp.id SUU _chem_comp.mon_nstd_flag . _chem_comp.name '(E)-3-(3-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)phenyl)-2-cyanoacrylamide bound form' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N09 C08 SUU sing 298 n n N07 C06 SUU trip 299 n n C06 C05 SUU sing 300 n n C08 C05 SUU sing 301 n n C08 O10 SUU doub 302 n n C05 C04 SUU sing 303 n n C12 C13 SUU doub 304 n y C12 C11 SUU sing 305 n y C13 C14 SUU sing 306 n y C04 C11 SUU sing 307 n n C11 C16 SUU doub 308 n y C14 C15 SUU doub 309 n y C24 C23 SUU doub 310 n y C24 C25 SUU sing 311 n y C16 C15 SUU sing 312 n y C23 N22 SUU sing 313 n y C15 C17 SUU sing 314 n n C25 C17 SUU doub 315 n y C25 C21 SUU sing 316 n y C17 N18 SUU sing 317 n y N22 C21 SUU sing 318 n y C21 N20 SUU doub 319 n y N18 C19 SUU doub 320 n y N20 C19 SUU sing 321 n y C14 H1 SUU sing 322 n n C19 H2 SUU sing 323 n n C24 H3 SUU sing 324 n n C04 H4 SUU sing 325 n n C04 H5 SUU sing 326 n n C05 H6 SUU sing 327 n n C12 H7 SUU sing 328 n n C13 H8 SUU sing 329 n n C16 H9 SUU sing 330 n n C23 H10 SUU sing 331 n n N09 H11 SUU sing 332 n n N09 H12 SUU sing 333 n n N22 H13 SUU sing 334 n n # _atom_sites.entry_id 7UP6 _atom_sites.fract_transf_matrix[1][1] 0.014051 _atom_sites.fract_transf_matrix[1][2] 0.008112 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SUU A 1 900 900 SUU 493 . C 3 OXM A 1 901 901 OXM OXM . D 3 OXM A 1 902 902 OXM OXM . E 4 HOH A 1 1001 48 HOH HOH . E 4 HOH A 2 1002 39 HOH HOH . E 4 HOH A 3 1003 52 HOH HOH . E 4 HOH A 4 1004 2 HOH HOH . E 4 HOH A 5 1005 47 HOH HOH . E 4 HOH A 6 1006 9 HOH HOH . E 4 HOH A 7 1007 7 HOH HOH . E 4 HOH A 8 1008 42 HOH HOH . E 4 HOH A 9 1009 36 HOH HOH . E 4 HOH A 10 1010 14 HOH HOH . E 4 HOH A 11 1011 29 HOH HOH . E 4 HOH A 12 1012 28 HOH HOH . E 4 HOH A 13 1013 15 HOH HOH . E 4 HOH A 14 1014 40 HOH HOH . E 4 HOH A 15 1015 38 HOH HOH . E 4 HOH A 16 1016 22 HOH HOH . E 4 HOH A 17 1017 35 HOH HOH . E 4 HOH A 18 1018 23 HOH HOH . E 4 HOH A 19 1019 12 HOH HOH . E 4 HOH A 20 1020 31 HOH HOH . E 4 HOH A 21 1021 20 HOH HOH . E 4 HOH A 22 1022 33 HOH HOH . E 4 HOH A 23 1023 26 HOH HOH . E 4 HOH A 24 1024 8 HOH HOH . E 4 HOH A 25 1025 55 HOH HOH . E 4 HOH A 26 1026 25 HOH HOH . E 4 HOH A 27 1027 11 HOH HOH . E 4 HOH A 28 1028 1 HOH HOH . E 4 HOH A 29 1029 21 HOH HOH . E 4 HOH A 30 1030 45 HOH HOH . E 4 HOH A 31 1031 49 HOH HOH . E 4 HOH A 32 1032 19 HOH HOH . E 4 HOH A 33 1033 32 HOH HOH . E 4 HOH A 34 1034 13 HOH HOH . E 4 HOH A 35 1035 50 HOH HOH . E 4 HOH A 36 1036 37 HOH HOH . E 4 HOH A 37 1037 43 HOH HOH . E 4 HOH A 38 1038 24 HOH HOH . E 4 HOH A 39 1039 41 HOH HOH . E 4 HOH A 40 1040 57 HOH HOH . E 4 HOH A 41 1041 18 HOH HOH . E 4 HOH A 42 1042 4 HOH HOH . E 4 HOH A 43 1043 56 HOH HOH . E 4 HOH A 44 1044 58 HOH HOH . E 4 HOH A 45 1045 16 HOH HOH . E 4 HOH A 46 1046 59 HOH HOH . E 4 HOH A 47 1047 54 HOH HOH . E 4 HOH A 48 1048 5 HOH HOH . E 4 HOH A 49 1049 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 SUU . . . B 2 -25.498 6.905 37.21 1 41.48 ? C11 SUU 900 A 1 HETATM 2 C C14 SUU . . . B 2 -27.959 8.186 37.455 1 39.67 ? C14 SUU 900 A 1 HETATM 3 C C15 SUU . . . B 2 -26.796 8.835 37.857 1 33.2 ? C15 SUU 900 A 1 HETATM 4 C C19 SUU . . . B 2 -28.122 11.727 39.64 1 38.87 ? C19 SUU 900 A 1 HETATM 5 C C21 SUU . . . B 2 -26.155 12.423 38.862 1 34 ? C21 SUU 900 A 1 HETATM 6 C C24 SUU . . . B 2 -24.602 11.31 37.613 1 32.88 ? C24 SUU 900 A 1 HETATM 7 C C25 SUU . . . B 2 -25.889 11.183 38.26 1 34.67 ? C25 SUU 900 A 1 HETATM 8 C C04 SUU . . . B 2 -24.138 6.239 37.094 1 38.62 ? C04 SUU 900 A 1 HETATM 9 C C05 SUU . . . B 2 -23.568 6.288 35.651 1 44.29 ? C05 SUU 900 A 1 HETATM 10 C C06 SUU . . . B 2 -22.941 7.567 35.325 1 47.57 ? C06 SUU 900 A 1 HETATM 11 C C08 SUU . . . B 2 -22.556 5.159 35.42 1 53.75 ? C08 SUU 900 A 1 HETATM 12 C C12 SUU . . . B 2 -26.669 6.272 36.814 1 34.01 ? C12 SUU 900 A 1 HETATM 13 C C13 SUU . . . B 2 -27.892 6.909 36.939 1 38.14 ? C13 SUU 900 A 1 HETATM 14 C C16 SUU . . . B 2 -25.57 8.196 37.731 1 31.57 ? C16 SUU 900 A 1 HETATM 15 C C17 SUU . . . B 2 -26.876 10.201 38.421 1 36.54 ? C17 SUU 900 A 1 HETATM 16 C C23 SUU . . . B 2 -24.166 12.565 37.848 1 36.71 ? C23 SUU 900 A 1 HETATM 17 N N07 SUU . . . B 2 -22.452 8.568 35.081 1 43.12 ? N07 SUU 900 A 1 HETATM 18 N N09 SUU . . . B 2 -21.979 5.163 34.202 1 59.63 ? N09 SUU 900 A 1 HETATM 19 N N18 SUU . . . B 2 -27.969 10.514 39.108 1 38.53 ? N18 SUU 900 A 1 HETATM 20 N N20 SUU . . . B 2 -27.247 12.718 39.551 1 35.49 ? N20 SUU 900 A 1 HETATM 21 N N22 SUU . . . B 2 -25.108 13.258 38.608 1 30.52 ? N22 SUU 900 A 1 HETATM 22 O O10 SUU . . . B 2 -22.315 4.338 36.287 1 52.99 ? O10 SUU 900 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #