data_7UP6 # _model_server_result.job_id ENNQ2o82im1LSY81EVgE4A _model_server_result.datetime_utc '2024-12-02 01:04:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7up6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 7UP6 # _exptl.entry_id 7UP6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.05 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7UP6 _cell.length_a 71.17 _cell.length_b 71.17 _cell.length_c 144.84 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 28 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 440 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C04 _struct_conn.ptnr2_label_comp_id SUU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SUU _struct_conn.ptnr2_auth_seq_id 900 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.902 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 N O3' _chem_comp.formula_weight 89.05 _chem_comp.id OXM _chem_comp.mon_nstd_flag . _chem_comp.name 'OXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 OXM sing 237 n n C1 O1 OXM doub 238 n n C1 C2 OXM sing 239 n n N1 HN1 OXM sing 240 n n N1 HN2 OXM sing 241 n n C2 O2 OXM doub 242 n n C2 O3 OXM sing 243 n n O3 HO3 OXM sing 244 n n # _atom_sites.entry_id 7UP6 _atom_sites.fract_transf_matrix[1][1] 0.014051 _atom_sites.fract_transf_matrix[1][2] 0.008112 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SUU A 1 900 900 SUU 493 . C 3 OXM A 1 901 901 OXM OXM . D 3 OXM A 1 902 902 OXM OXM . E 4 HOH A 1 1001 48 HOH HOH . E 4 HOH A 2 1002 39 HOH HOH . E 4 HOH A 3 1003 52 HOH HOH . E 4 HOH A 4 1004 2 HOH HOH . E 4 HOH A 5 1005 47 HOH HOH . E 4 HOH A 6 1006 9 HOH HOH . E 4 HOH A 7 1007 7 HOH HOH . E 4 HOH A 8 1008 42 HOH HOH . E 4 HOH A 9 1009 36 HOH HOH . E 4 HOH A 10 1010 14 HOH HOH . E 4 HOH A 11 1011 29 HOH HOH . E 4 HOH A 12 1012 28 HOH HOH . E 4 HOH A 13 1013 15 HOH HOH . E 4 HOH A 14 1014 40 HOH HOH . E 4 HOH A 15 1015 38 HOH HOH . E 4 HOH A 16 1016 22 HOH HOH . E 4 HOH A 17 1017 35 HOH HOH . E 4 HOH A 18 1018 23 HOH HOH . E 4 HOH A 19 1019 12 HOH HOH . E 4 HOH A 20 1020 31 HOH HOH . E 4 HOH A 21 1021 20 HOH HOH . E 4 HOH A 22 1022 33 HOH HOH . E 4 HOH A 23 1023 26 HOH HOH . E 4 HOH A 24 1024 8 HOH HOH . E 4 HOH A 25 1025 55 HOH HOH . E 4 HOH A 26 1026 25 HOH HOH . E 4 HOH A 27 1027 11 HOH HOH . E 4 HOH A 28 1028 1 HOH HOH . E 4 HOH A 29 1029 21 HOH HOH . E 4 HOH A 30 1030 45 HOH HOH . E 4 HOH A 31 1031 49 HOH HOH . E 4 HOH A 32 1032 19 HOH HOH . E 4 HOH A 33 1033 32 HOH HOH . E 4 HOH A 34 1034 13 HOH HOH . E 4 HOH A 35 1035 50 HOH HOH . E 4 HOH A 36 1036 37 HOH HOH . E 4 HOH A 37 1037 43 HOH HOH . E 4 HOH A 38 1038 24 HOH HOH . E 4 HOH A 39 1039 41 HOH HOH . E 4 HOH A 40 1040 57 HOH HOH . E 4 HOH A 41 1041 18 HOH HOH . E 4 HOH A 42 1042 4 HOH HOH . E 4 HOH A 43 1043 56 HOH HOH . E 4 HOH A 44 1044 58 HOH HOH . E 4 HOH A 45 1045 16 HOH HOH . E 4 HOH A 46 1046 59 HOH HOH . E 4 HOH A 47 1047 54 HOH HOH . E 4 HOH A 48 1048 5 HOH HOH . E 4 HOH A 49 1049 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OXM . . . D 3 -7.139 12.413 26.786 1 84.57 ? C1 OXM 902 A 1 HETATM 2 N N1 OXM . . . D 3 -7.483 11.421 27.586 1 84.25 ? N1 OXM 902 A 1 HETATM 3 O O1 OXM . . . D 3 -6.98 12.272 25.552 1 82.03 ? O1 OXM 902 A 1 HETATM 4 C C2 OXM . . . D 3 -6.949 13.753 27.385 1 89.49 ? C2 OXM 902 A 1 HETATM 5 O O2 OXM . . . D 3 -6.91 14.759 26.638 1 89.47 ? O2 OXM 902 A 1 HETATM 6 O O3 OXM . . . D 3 -6.823 13.847 28.624 1 88.41 ? O3 OXM 902 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #