data_7URD # _model_server_result.job_id jZZ5j8IPHlHKSa-7bIHCsw _model_server_result.datetime_utc '2024-11-29 16:26:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7urd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":505}' # _entry.id 7URD # _exptl.entry_id 7URD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 282.461 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7URD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7URD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 25 A CYS 17 1_555 A SG CYS 217 A CYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 5 B CYS 203 1_555 B SG CYS 19 B CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 7 B CYS 205 1_555 B SG CYS 14 B CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 C SG CYS 43 L CYS 43 1_555 C SG CYS 108 L CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 D SG CYS 41 H CYS 41 1_555 D SG CYS 115 H CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A SG CYS 378 A CYS 370 1_555 J ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc2 A SG CYS 384 A CYS 376 1_555 J ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc3 A SG CYS 388 A CYS 380 1_555 J ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc4 A ND1 HIS 390 A HIS 382 1_555 J ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 552 n n C1 O2 OLA sing 553 n n C1 C2 OLA sing 554 n n O2 HO2 OLA sing 555 n n C2 C3 OLA sing 556 n n C2 H21 OLA sing 557 n n C2 H22 OLA sing 558 n n C3 C4 OLA sing 559 n n C3 H31 OLA sing 560 n n C3 H32 OLA sing 561 n n C4 C5 OLA sing 562 n n C4 H41 OLA sing 563 n n C4 H42 OLA sing 564 n n C5 C6 OLA sing 565 n n C5 H51 OLA sing 566 n n C5 H52 OLA sing 567 n n C6 C7 OLA sing 568 n n C6 H61 OLA sing 569 n n C6 H62 OLA sing 570 n n C7 C8 OLA sing 571 n n C7 H71 OLA sing 572 n n C7 H72 OLA sing 573 n n C8 C9 OLA sing 574 n n C8 H81 OLA sing 575 n n C8 H82 OLA sing 576 n n C9 C10 OLA doub 577 z n C9 H9 OLA sing 578 n n C10 C11 OLA sing 579 n n C10 H10 OLA sing 580 n n C11 C12 OLA sing 581 n n C11 H111 OLA sing 582 n n C11 H112 OLA sing 583 n n C12 C13 OLA sing 584 n n C12 H121 OLA sing 585 n n C12 H122 OLA sing 586 n n C13 C14 OLA sing 587 n n C13 H131 OLA sing 588 n n C13 H132 OLA sing 589 n n C14 C15 OLA sing 590 n n C14 H141 OLA sing 591 n n C14 H142 OLA sing 592 n n C15 C16 OLA sing 593 n n C15 H151 OLA sing 594 n n C15 H152 OLA sing 595 n n C16 C17 OLA sing 596 n n C16 H161 OLA sing 597 n n C16 H162 OLA sing 598 n n C17 C18 OLA sing 599 n n C17 H171 OLA sing 600 n n C17 H172 OLA sing 601 n n C18 H181 OLA sing 602 n n C18 H182 OLA sing 603 n n C18 H183 OLA sing 604 n n # _atom_sites.entry_id 7URD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 O50 A 1 501 1 O50 LGK . F 6 CLR A 1 502 5 CLR CLR . G 6 CLR A 1 503 11 CLR CLR . H 7 AJP A 1 504 101 AJP AJP . I 8 OLA A 1 505 201 OLA OLA . J 9 ZN A 1 506 1 ZN ZN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . I 8 120.667 89.226 104.054 1 79.21 ? C1 OLA 505 A 1 HETATM 2 O O1 OLA . . . I 8 121.302 89.394 102.981 1 79.21 ? O1 OLA 505 A 1 HETATM 3 O O2 OLA . . . I 8 121.27 88.836 105.087 1 79.21 ? O2 OLA 505 A 1 HETATM 4 C C2 OLA . . . I 8 119.166 89.491 104.099 1 79.21 ? C2 OLA 505 A 1 HETATM 5 C C3 OLA . . . I 8 118.754 90.617 103.156 1 79.21 ? C3 OLA 505 A 1 HETATM 6 C C4 OLA . . . I 8 117.26 90.584 102.849 1 79.21 ? C4 OLA 505 A 1 HETATM 7 C C5 OLA . . . I 8 116.897 91.412 101.62 1 79.21 ? C5 OLA 505 A 1 HETATM 8 C C6 OLA . . . I 8 115.472 91.129 101.157 1 79.21 ? C6 OLA 505 A 1 HETATM 9 C C7 OLA . . . I 8 114.987 92.115 100.098 1 79.21 ? C7 OLA 505 A 1 HETATM 10 C C8 OLA . . . I 8 113.516 91.887 99.764 1 79.21 ? C8 OLA 505 A 1 HETATM 11 C C9 OLA . . . I 8 112.936 93.127 99.092 1 79.21 ? C9 OLA 505 A 1 HETATM 12 C C10 OLA . . . I 8 111.771 93.598 99.484 1 79.21 ? C10 OLA 505 A 1 HETATM 13 C C11 OLA . . . I 8 111.012 92.916 100.618 1 79.21 ? C11 OLA 505 A 1 HETATM 14 C C12 OLA . . . I 8 109.704 93.659 100.866 1 79.21 ? C12 OLA 505 A 1 HETATM 15 C C13 OLA . . . I 8 109.579 94.168 102.299 1 79.21 ? C13 OLA 505 A 1 HETATM 16 C C14 OLA . . . I 8 108.162 93.992 102.836 1 79.21 ? C14 OLA 505 A 1 HETATM 17 C C15 OLA . . . I 8 107.728 95.115 103.773 1 79.21 ? C15 OLA 505 A 1 HETATM 18 C C16 OLA . . . I 8 106.207 95.169 103.889 1 79.21 ? C16 OLA 505 A 1 HETATM 19 C C17 OLA . . . I 8 105.711 96.274 104.815 1 79.21 ? C17 OLA 505 A 1 HETATM 20 C C18 OLA . . . I 8 104.198 96.453 104.71 1 79.21 ? C18 OLA 505 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 20 #