data_7US1 # _model_server_result.job_id wcr9AvFjawzAwhT2i_Ve4Q _model_server_result.datetime_utc '2024-12-23 06:41:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7us1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":509}' # _entry.id 7US1 # _exptl.entry_id 7US1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7US1 _cell.length_a 83.078 _cell.length_b 83.078 _cell.length_c 253.816 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7US1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLU 64 B GLU 64 1_555 B N SEP 65 B SEP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C SEP 65 B SEP 65 1_555 B N THR 66 B THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 C C GLU 64 C GLU 64 1_555 C N SEP 65 C SEP 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 C C SEP 65 C SEP 65 1_555 C N THR 66 C THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A SG CYS 11 A CYS 150 1_555 I ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc2 A SG CYS 15 A CYS 154 1_555 I ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc3 A SG CYS 27 A CYS 166 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc4 A SG CYS 30 A CYS 169 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc5 A SG CYS 57 A CYS 196 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc6 A SG CYS 62 A CYS 201 1_555 F ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc7 A SG CYS 73 A CYS 212 1_555 I ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc8 A NE2 HIS 76 A HIS 215 1_555 I ZN ZN . A ZN 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc9 A SG CYS 99 A CYS 238 1_555 G ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc10 A SG CYS 102 A CYS 241 1_555 G ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc11 A SG CYS 114 A CYS 253 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc12 A ND1 HIS 118 A HIS 257 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc13 A SG CYS 121 A CYS 260 1_555 G ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc14 A SG CYS 124 A CYS 263 1_555 G ZN ZN . A ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc15 A SG CYS 150 A CYS 289 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc16 A SG CYS 154 A CYS 293 1_555 D ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc17 A SG CYS 193 A CYS 332 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc18 A SG CYS 198 A CYS 337 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc19 A SG CYS 213 A CYS 352 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc20 A SG CYS 221 A CYS 360 1_555 H ZN ZN . A ZN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc21 A SG CYS 226 A CYS 365 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc22 A SG CYS 229 A CYS 368 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc23 A NE2 HIS 234 A HIS 373 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc24 A SG CYS 238 A CYS 377 1_555 E ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7US1 _atom_sites.fract_transf_matrix[1][1] 0.012037 _atom_sites.fract_transf_matrix[1][2] 0.006949 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013899 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00394 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN A 1 501 501 ZN ZN . E 3 ZN A 1 502 502 ZN ZN . F 3 ZN A 1 503 503 ZN ZN . G 3 ZN A 1 504 504 ZN ZN . H 3 ZN A 1 505 505 ZN ZN . I 3 ZN A 1 506 506 ZN ZN . J 4 PEG A 1 507 3 PEG PEG . K 5 EDO A 1 508 2 EDO EDO . L 5 EDO A 1 509 5 EDO EDO . M 5 EDO B 1 101 4 EDO EDO . N 5 EDO C 1 101 1 EDO EDO . O 6 HOH A 1 601 50 HOH HOH . O 6 HOH A 2 602 38 HOH HOH . O 6 HOH A 3 603 9 HOH HOH . O 6 HOH A 4 604 41 HOH HOH . O 6 HOH A 5 605 12 HOH HOH . O 6 HOH A 6 606 17 HOH HOH . O 6 HOH A 7 607 49 HOH HOH . O 6 HOH A 8 608 44 HOH HOH . O 6 HOH A 9 609 45 HOH HOH . O 6 HOH A 10 610 57 HOH HOH . O 6 HOH A 11 611 42 HOH HOH . O 6 HOH A 12 612 6 HOH HOH . O 6 HOH A 13 613 47 HOH HOH . O 6 HOH A 14 614 21 HOH HOH . O 6 HOH A 15 615 48 HOH HOH . O 6 HOH A 16 616 11 HOH HOH . O 6 HOH A 17 617 3 HOH HOH . O 6 HOH A 18 618 52 HOH HOH . O 6 HOH A 19 619 51 HOH HOH . O 6 HOH A 20 620 15 HOH HOH . O 6 HOH A 21 621 18 HOH HOH . O 6 HOH A 22 622 2 HOH HOH . O 6 HOH A 23 623 54 HOH HOH . O 6 HOH A 24 624 20 HOH HOH . O 6 HOH A 25 625 39 HOH HOH . O 6 HOH A 26 626 7 HOH HOH . O 6 HOH A 27 627 56 HOH HOH . O 6 HOH A 28 628 58 HOH HOH . O 6 HOH A 29 629 43 HOH HOH . P 6 HOH B 1 201 53 HOH HOH . P 6 HOH B 2 202 26 HOH HOH . P 6 HOH B 3 203 27 HOH HOH . P 6 HOH B 4 204 46 HOH HOH . Q 6 HOH C 1 201 32 HOH HOH . Q 6 HOH C 2 202 14 HOH HOH . Q 6 HOH C 3 203 5 HOH HOH . Q 6 HOH C 4 204 40 HOH HOH . Q 6 HOH C 5 205 28 HOH HOH . Q 6 HOH C 6 206 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . L 5 -20.578 32.859 -18.954 1 70.94 ? C1 EDO 509 A 1 HETATM 2 O O1 EDO . . . L 5 -19.295 33.388 -19.311 1 72.06 ? O1 EDO 509 A 1 HETATM 3 C C2 EDO . . . L 5 -21.112 33.599 -17.735 1 70.28 ? C2 EDO 509 A 1 HETATM 4 O O2 EDO . . . L 5 -21.312 34.977 -18.073 1 81.35 ? O2 EDO 509 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #