data_7UT8
#
_model_server_result.job_id            DGGDioOqItHWHvCqUrIg6g 
_model_server_result.datetime_utc      '2025-07-12 18:04:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ut8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":303}' 
#
_entry.id    7UT8 
#
_exptl.entry_id    7UT8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7UT8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UT8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 10 Q N N 
? 10 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 62 A CYS 62 1_555 I FE3 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc2 A SG CYS 88 A CYS 88 1_555 I FE4 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc3 A SG CYS 88 A CYS 88 1_555 I FE5 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc4 A SG CYS 154 A CYS 154 1_555 I FE1 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc5 A SG CYS 275 A CYS 275 1_555 H FE1 ICS . A ICS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc6 B SG CYS 70 B CYS 70 1_555 I FE7 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc7 B SG CYS 95 B CYS 95 1_555 I FE2 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc8 B SG CYS 95 B CYS 95 1_555 I FE8 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc9 B O ARG 108 B ARG 108 1_555 M FE FE . D FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc10 B OE2 GLU 109 B GLU 109 1_555 M FE FE . D FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc11 B SG CYS 153 B CYS 153 1_555 I FE6 CLF . B CLF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc12 B OD2 ASP 353 B ASP 353 1_555 J FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc13 B OD2 ASP 357 B ASP 357 1_555 J FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? 
metalc ? metalc14 J FE FE . B FE 602 1_555 D O ARG 108 D ARG 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc15 J FE FE . B FE 602 1_555 D OE2 GLU 109 D GLU 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
metalc ? metalc16 C SG CYS 62 C CYS 62 1_555 N FE3 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc17 C SG CYS 88 C CYS 88 1_555 N FE4 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc18 C SG CYS 88 C CYS 88 1_555 N FE5 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc19 C SG CYS 154 C CYS 154 1_555 N FE1 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc20 C SG CYS 275 C CYS 275 1_555 L FE1 ICS . C ICS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc21 D SG CYS 70 D CYS 70 1_555 N FE7 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc22 D SG CYS 95 D CYS 95 1_555 N FE8 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc23 D SG CYS 95 D CYS 95 1_555 N FE2 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc24 D SG CYS 153 D CYS 153 1_555 N FE6 CLF . D CLF 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc25 D OD2 ASP 357 D ASP 357 1_555 M FE FE . D FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc26 E OG SER 17 E SER 16 1_555 P MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc27 E SG CYS 98 E CYS 97 1_555 O FE1 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc28 E SG CYS 133 E CYS 132 1_555 O FE2 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc29 O FE3 SF4 . E SF4 301 1_555 F SG CYS 98 F CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc30 O FE4 SF4 . E SF4 301 1_555 F SG CYS 133 F CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc31 P MG MG . E MG 302 1_555 Q O1G ATP . E ATP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? 
metalc ? metalc32 P MG MG . E MG 302 1_555 Q O3B ATP . E ATP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc33 P MG MG . E MG 302 1_555 Q O2B ATP . E ATP 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc34 F OG SER 17 F SER 16 1_555 R MG MG . F MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc35 R MG MG . F MG 301 1_555 S O1B ATP . F ATP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc36 R MG MG . F MG 301 1_555 S O3G ATP . F ATP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7UT8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 HCA A 1 501 1494 HCA HCA . 
H 5 ICS A 1 502 1496 ICS ICS . 
I 6 CLF B 1 601 1498 CLF CLF . 
J 7 FE B 1 602 1492 FE FE . 
K 4 HCA C 1 501 1494 HCA HCA . 
L 5 ICS C 1 502 1496 ICS ICS . 
M 7 FE D 1 601 1492 FE FE . 
N 6 CLF D 1 602 1498 CLF CLF . 
O 8 SF4 E 1 301 1290 SF4 SF4 . 
P 9 MG E 1 302 1291 MG MG . 
Q 10 ATP E 1 303 1292 ATP ATP . 
R 9 MG F 1 301 1291 MG MG . 
S 10 ATP F 1 302 1292 ATP ATP . 
T 11 HOH A 1 601 25 HOH HOH . 
T 11 HOH A 2 602 13 HOH HOH . 
T 11 HOH A 3 603 23 HOH HOH . 
T 11 HOH A 4 604 11 HOH HOH . 
T 11 HOH A 5 605 6 HOH HOH . 
T 11 HOH A 6 606 1 HOH HOH . 
U 11 HOH B 1 701 19 HOH HOH . 
U 11 HOH B 2 702 15 HOH HOH . 
U 11 HOH B 3 703 16 HOH HOH . 
U 11 HOH B 4 704 29 HOH HOH . 
U 11 HOH B 5 705 21 HOH HOH . 
U 11 HOH B 6 706 27 HOH HOH . 
U 11 HOH B 7 707 9 HOH HOH . 
U 11 HOH B 8 708 14 HOH HOH . 
U 11 HOH B 9 709 4 HOH HOH . 
U 11 HOH B 10 710 5 HOH HOH . 
V 11 HOH C 1 601 7 HOH HOH . 
V 11 HOH C 2 602 12 HOH HOH . 
V 11 HOH C 3 603 20 HOH HOH . 
V 11 HOH C 4 604 28 HOH HOH . 
W 11 HOH D 1 701 26 HOH HOH . 
W 11 HOH D 2 702 17 HOH HOH . 
W 11 HOH D 3 703 10 HOH HOH . 
W 11 HOH D 4 704 8 HOH HOH . 
W 11 HOH D 5 705 24 HOH HOH . 
W 11 HOH D 6 706 3 HOH HOH . 
X 11 HOH E 1 401 2 HOH HOH . 
X 11 HOH E 2 402 22 HOH HOH . 
Y 11 HOH F 1 401 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . Q 10 191.789 98.698 164.518 1 53.98 ? PG ATP 303 E 1 
HETATM 2 O O1G ATP . . . Q 10 190.383 99.104 164.867 1 45.96 ? O1G ATP 303 E 1 
HETATM 3 O O2G ATP . . . Q 10 192.812 99.42 165.332 1 47.43 ? O2G ATP 303 E 1 
HETATM 4 O O3G ATP . . . Q 10 192.067 98.769 163.04 1 48.6 ? O3G ATP 303 E 1 
HETATM 5 P PB ATP . . . Q 10 192.54 96.353 166.145 1 27.34 ? PB ATP 303 E 1 
HETATM 6 O O1B ATP . . . Q 10 193.66 97.129 166.734 1 45.82 ? O1B ATP 303 E 1 
HETATM 7 O O2B ATP . . . Q 10 191.426 95.883 167.009 1 45.27 ? O2B ATP 303 E 1 
HETATM 8 O O3B ATP . . . Q 10 191.914 97.146 164.913 1 45.92 ? O3B ATP 303 E 1 
HETATM 9 P PA ATP . . . Q 10 192.794 93.54 165.346 1 31.24 ? PA ATP 303 E 1 
HETATM 10 O O1A ATP . . . Q 10 192.473 93.076 166.723 1 46.36 ? O1A ATP 303 E 1 
HETATM 11 O O2A ATP . . . Q 10 191.774 93.313 164.286 1 46.97 ? O2A ATP 303 E 1 
HETATM 12 O O3A ATP . . . Q 10 193.154 95.091 165.385 1 31.35 ? O3A ATP 303 E 1 
HETATM 13 O O5' ATP . . . Q 10 194.178 92.898 164.883 1 41.32 ? O5' ATP 303 E 1 
HETATM 14 C C5' ATP . . . Q 10 194.721 93.325 163.616 1 44.13 ? C5' ATP 303 E 1 
HETATM 15 C C4' ATP . . . Q 10 195.35 92.138 162.936 1 40.48 ? C4' ATP 303 E 1 
HETATM 16 O O4' ATP . . . Q 10 196.29 91.524 163.852 1 44.5 ? O4' ATP 303 E 1 
HETATM 17 C C3' ATP . . . Q 10 194.384 91.018 162.526 1 43.58 ? C3' ATP 303 E 1 
HETATM 18 O O3' ATP . . . Q 10 194.773 90.427 161.292 1 49.53 ? O3' ATP 303 E 1 
HETATM 19 C C2' ATP . . . Q 10 194.518 90.031 163.684 1 39.97 ? C2' ATP 303 E 1 
HETATM 20 O O2' ATP . . . Q 10 194.143 88.724 163.322 1 48.41 ? O2' ATP 303 E 1 
HETATM 21 C C1' ATP . . . Q 10 196.01 90.15 163.955 1 42.41 ? C1' ATP 303 E 1 
HETATM 22 N N9 ATP . . . Q 10 196.424 89.692 165.267 1 44.18 ? N9 ATP 303 E 1 
HETATM 23 C C8 ATP . . . Q 10 196.035 90.161 166.495 1 46.23 ? C8 ATP 303 E 1 
HETATM 24 N N7 ATP . . . Q 10 196.605 89.512 167.484 1 46.84 ? N7 ATP 303 E 1 
HETATM 25 C C5 ATP . . . Q 10 197.41 88.564 166.867 1 43.08 ? C5 ATP 303 E 1 
HETATM 26 C C6 ATP . . . Q 10 198.27 87.57 167.365 1 45.58 ? C6 ATP 303 E 1 
HETATM 27 N N6 ATP . . . Q 10 198.474 87.349 168.659 1 49.37 ? N6 ATP 303 E 1 
HETATM 28 N N1 ATP . . . Q 10 198.92 86.8 166.463 1 45.75 ? N1 ATP 303 E 1 
HETATM 29 C C2 ATP . . . Q 10 198.714 87.024 165.161 1 45.94 ? C2 ATP 303 E 1 
HETATM 30 N N3 ATP . . . Q 10 197.931 87.927 164.579 1 47.36 ? N3 ATP 303 E 1 
HETATM 31 C C4 ATP . . . Q 10 197.303 88.672 165.5 1 43.52 ? C4 ATP 303 E 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    59 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           31 
#