data_7UUM # _model_server_result.job_id vf79UZwe-kXG3Jo_XNMcMw _model_server_result.datetime_utc '2024-11-08 04:15:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7uum # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7UUM # _exptl.entry_id 7UUM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UUM _cell.length_a 133.748 _cell.length_b 133.748 _cell.length_c 133.748 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UUM _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall 'P 4acd 2ab 3' _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 7UUM _atom_sites.fract_transf_matrix[1][1] 0.007477 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 301 301 COA COA . C 3 PAR A 1 302 1 PAR PAR . D 4 GOL A 1 303 1 GOL GOL . E 5 HOH A 1 401 21 HOH HOH . E 5 HOH A 2 402 14 HOH HOH . E 5 HOH A 3 403 47 HOH HOH . E 5 HOH A 4 404 44 HOH HOH . E 5 HOH A 5 405 33 HOH HOH . E 5 HOH A 6 406 13 HOH HOH . E 5 HOH A 7 407 16 HOH HOH . E 5 HOH A 8 408 48 HOH HOH . E 5 HOH A 9 409 45 HOH HOH . E 5 HOH A 10 410 23 HOH HOH . E 5 HOH A 11 411 60 HOH HOH . E 5 HOH A 12 412 10 HOH HOH . E 5 HOH A 13 413 55 HOH HOH . E 5 HOH A 14 414 41 HOH HOH . E 5 HOH A 15 415 25 HOH HOH . E 5 HOH A 16 416 56 HOH HOH . E 5 HOH A 17 417 54 HOH HOH . E 5 HOH A 18 418 62 HOH HOH . E 5 HOH A 19 419 22 HOH HOH . E 5 HOH A 20 420 63 HOH HOH . E 5 HOH A 21 421 32 HOH HOH . E 5 HOH A 22 422 30 HOH HOH . E 5 HOH A 23 423 43 HOH HOH . E 5 HOH A 24 424 28 HOH HOH . E 5 HOH A 25 425 51 HOH HOH . E 5 HOH A 26 426 39 HOH HOH . E 5 HOH A 27 427 53 HOH HOH . E 5 HOH A 28 428 31 HOH HOH . E 5 HOH A 29 429 9 HOH HOH . E 5 HOH A 30 430 15 HOH HOH . E 5 HOH A 31 431 49 HOH HOH . E 5 HOH A 32 432 58 HOH HOH . E 5 HOH A 33 433 3 HOH HOH . E 5 HOH A 34 434 4 HOH HOH . E 5 HOH A 35 435 59 HOH HOH . E 5 HOH A 36 436 18 HOH HOH . E 5 HOH A 37 437 29 HOH HOH . E 5 HOH A 38 438 64 HOH HOH . E 5 HOH A 39 439 40 HOH HOH . E 5 HOH A 40 440 24 HOH HOH . E 5 HOH A 41 441 35 HOH HOH . E 5 HOH A 42 442 34 HOH HOH . E 5 HOH A 43 443 27 HOH HOH . E 5 HOH A 44 444 7 HOH HOH . E 5 HOH A 45 445 52 HOH HOH . E 5 HOH A 46 446 38 HOH HOH . E 5 HOH A 47 447 50 HOH HOH . E 5 HOH A 48 448 65 HOH HOH . E 5 HOH A 49 449 36 HOH HOH . E 5 HOH A 50 450 26 HOH HOH . E 5 HOH A 51 451 46 HOH HOH . E 5 HOH A 52 452 57 HOH HOH . E 5 HOH A 53 453 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 9.857 3.184 14.354 0.83 59.1 ? N1A COA 301 A 1 HETATM 2 C C2A COA . . . B 2 10.331 4.275 15 0.83 60.69 ? C2A COA 301 A 1 HETATM 3 N N3A COA . . . B 2 11.038 4.133 16.125 0.83 63.34 ? N3A COA 301 A 1 HETATM 4 C C4A COA . . . B 2 11.277 2.925 16.614 0.83 70.15 ? C4A COA 301 A 1 HETATM 5 C C5A COA . . . B 2 10.812 1.846 15.982 0.83 69.13 ? C5A COA 301 A 1 HETATM 6 C C6A COA . . . B 2 10.088 1.994 14.829 0.83 62.28 ? C6A COA 301 A 1 HETATM 7 N N6A COA . . . B 2 9.474 1.026 13.954 0.83 55.73 ? N6A COA 301 A 1 HETATM 8 N N7A COA . . . B 2 11.191 0.765 16.677 0.83 69.23 ? N7A COA 301 A 1 HETATM 9 C C8A COA . . . B 2 11.889 1.179 17.738 0.83 74.96 ? C8A COA 301 A 1 HETATM 10 N N9A COA . . . B 2 11.941 2.514 17.698 0.83 75.65 ? N9A COA 301 A 1 HETATM 11 C C1B COA . . . B 2 12.578 3.387 18.61 0.83 81.53 ? C1B COA 301 A 1 HETATM 12 C C2B COA . . . B 2 11.834 3.543 19.705 0.83 83.19 ? C2B COA 301 A 1 HETATM 13 O O2B COA . . . B 2 11.051 4.78 19.613 0.83 75.88 ? O2B COA 301 A 1 HETATM 14 C C3B COA . . . B 2 12.86 3.64 20.859 0.83 93.71 ? C3B COA 301 A 1 HETATM 15 O O3B COA . . . B 2 13.286 4.892 20.976 0.83 99.7 ? O3B COA 301 A 1 HETATM 16 P P3B COA . . . B 2 14.327 5.292 22.185 0.83 107.11 ? P3B COA 301 A 1 HETATM 17 O O7A COA . . . B 2 15.767 5.069 21.731 0.83 90.63 ? O7A COA 301 A 1 HETATM 18 O O8A COA . . . B 2 14.144 6.773 22.541 0.83 87.65 ? O8A COA 301 A 1 HETATM 19 O O9A COA . . . B 2 14.036 4.431 23.416 0.83 86.04 ? O9A COA 301 A 1 HETATM 20 C C4B COA . . . B 2 14.052 2.713 20.388 0.83 91.27 ? C4B COA 301 A 1 HETATM 21 O O4B COA . . . B 2 14.013 2.721 19.079 0.83 84.26 ? O4B COA 301 A 1 HETATM 22 C C5B COA . . . B 2 13.915 1.254 20.923 0.83 94.3 ? C5B COA 301 A 1 HETATM 23 O O5B COA . . . B 2 12.641 1.017 21.414 0.83 94.87 ? O5B COA 301 A 1 HETATM 24 P P1A COA . . . B 2 12.145 -0.503 21.609 0.83 106.76 ? P1A COA 301 A 1 HETATM 25 O O1A COA . . . B 2 10.661 -0.519 21.784 0.83 98.4 ? O1A COA 301 A 1 HETATM 26 O O2A COA . . . B 2 12.798 -1.079 22.831 0.83 102.58 ? O2A COA 301 A 1 HETATM 27 O O3A COA . . . B 2 12.54 -1.426 20.302 0.83 97.66 ? O3A COA 301 A 1 HETATM 28 P P2A COA . . . B 2 12.158 -3.081 20.19 0.83 114.4 ? P2A COA 301 A 1 HETATM 29 O O4A COA . . . B 2 13.373 -3.906 20.502 0.83 94.29 ? O4A COA 301 A 1 HETATM 30 O O5A COA . . . B 2 11.024 -3.42 21.21 0.83 86.97 ? O5A COA 301 A 1 HETATM 31 O O6A COA . . . B 2 11.644 -3.45 18.646 0.83 84.01 ? O6A COA 301 A 1 HETATM 32 C CBP COA . . . B 2 11.342 -3.083 16.307 0.83 67.35 ? CBP COA 301 A 1 HETATM 33 C CCP COA . . . B 2 11.997 -2.58 17.581 0.83 78.48 ? CCP COA 301 A 1 HETATM 34 C CDP COA . . . B 2 11.965 -2.359 15.07 0.83 60.17 ? CDP COA 301 A 1 HETATM 35 C CEP COA . . . B 2 11.578 -4.616 16.184 0.83 64.26 ? CEP COA 301 A 1 HETATM 36 C CAP COA . . . B 2 9.82 -2.796 16.405 0.83 61.86 ? CAP COA 301 A 1 HETATM 37 O OAP COA . . . B 2 9.604 -1.588 17.083 0.83 64.29 ? OAP COA 301 A 1 HETATM 38 C C9P COA . . . B 2 9.183 -2.718 15.027 0.83 58.07 ? C9P COA 301 A 1 HETATM 39 O O9P COA . . . B 2 8.825 -1.667 14.587 0.83 56.8 ? O9P COA 301 A 1 HETATM 40 N N8P COA . . . B 2 9 -3.933 14.251 0.83 54.03 ? N8P COA 301 A 1 HETATM 41 C C7P COA . . . B 2 8.371 -3.845 12.918 0.83 50.21 ? C7P COA 301 A 1 HETATM 42 C C6P COA . . . B 2 6.838 -4.132 13.086 0.83 51.29 ? C6P COA 301 A 1 HETATM 43 C C5P COA . . . B 2 6.27 -4.402 11.723 0.83 53.49 ? C5P COA 301 A 1 HETATM 44 O O5P COA . . . B 2 6.248 -3.562 10.931 0.83 53.57 ? O5P COA 301 A 1 HETATM 45 N N4P COA . . . B 2 5.737 -5.755 11.394 0.83 51.52 ? N4P COA 301 A 1 HETATM 46 C C3P COA . . . B 2 5.184 -6.002 10.01 0.83 53.62 ? C3P COA 301 A 1 HETATM 47 C C2P COA . . . B 2 6.23 -6.807 9.24 0.83 50.14 ? C2P COA 301 A 1 HETATM 48 S S1P COA . . . B 2 6.063 -8.609 9.679 0.83 62.6 ? S1P COA 301 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #