data_7UVU
#
_model_server_result.job_id            YpneEy2dUGetFmzUWXM7RA 
_model_server_result.datetime_utc      '2024-11-24 02:06:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7uvu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    7UVU 
#
_exptl.entry_id    7UVU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              390.865 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-({3-[(4-chlorophenyl)methyl]-4-oxo-3,5,7,8-tetrahydropyrido[4,3-d]pyrimidin-6(4H)-yl}methyl)benzonitrile 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.01 
_cell.angle_gamma         90 
_cell.entry_id            7UVU 
_cell.length_a            142.147 
_cell.length_b            152.662 
_cell.length_c            104.342 
_cell.Z_PDB               28 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UVU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetradecameric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
#
_chem_comp.formula           'C22 H19 Cl N4 O' 
_chem_comp.formula_weight    390.865 
_chem_comp.id                OY9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-({3-[(4-chlorophenyl)methyl]-4-oxo-3,5,7,8-tetrahydropyrido[4,3-d]pyrimidin-6(4H)-yl}methyl)benzonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C02 C03 OY9 sing 237 n n 
C02 N01 OY9 trip 238 n n 
C03 C04 OY9 doub 239 n y 
C03 C28 OY9 sing 240 n y 
C04 C05 OY9 sing 241 n y 
C05 C06 OY9 doub 242 n y 
C06 C07 OY9 sing 243 n y 
C07 C08 OY9 sing 244 n n 
C07 C28 OY9 doub 245 n y 
C08 N09 OY9 sing 246 n n 
C10 C11 OY9 sing 247 n n 
C10 N09 OY9 sing 248 n n 
C11 C12 OY9 sing 249 n n 
C12 C26 OY9 doub 250 n n 
C12 N13 OY9 sing 251 n n 
C14 N13 OY9 doub 252 n n 
C14 N15 OY9 sing 253 n n 
C16 C17 OY9 sing 254 n n 
C16 N15 OY9 sing 255 n n 
C17 C18 OY9 doub 256 n y 
C17 C23 OY9 sing 257 n y 
C18 C19 OY9 sing 258 n y 
C19 C20 OY9 doub 259 n y 
C20 C22 OY9 sing 260 n y 
C22 C23 OY9 doub 261 n y 
C24 C26 OY9 sing 262 n n 
C24 N15 OY9 sing 263 n n 
C24 O25 OY9 doub 264 n n 
C26 C27 OY9 sing 265 n n 
C27 N09 OY9 sing 266 n n 
C20 CL21 OY9 sing 267 n n 
C04 H1 OY9 sing 268 n n 
C05 H2 OY9 sing 269 n n 
C06 H3 OY9 sing 270 n n 
C08 H4 OY9 sing 271 n n 
C08 H5 OY9 sing 272 n n 
C10 H6 OY9 sing 273 n n 
C10 H7 OY9 sing 274 n n 
C11 H8 OY9 sing 275 n n 
C11 H9 OY9 sing 276 n n 
C14 H10 OY9 sing 277 n n 
C16 H11 OY9 sing 278 n n 
C16 H12 OY9 sing 279 n n 
C18 H13 OY9 sing 280 n n 
C19 H14 OY9 sing 281 n n 
C22 H15 OY9 sing 282 n n 
C23 H16 OY9 sing 283 n n 
C27 H17 OY9 sing 284 n n 
C27 H18 OY9 sing 285 n n 
C28 H19 OY9 sing 286 n n 
#
_atom_sites.entry_id                     7UVU 
_atom_sites.fract_transf_matrix[1][1]    0.007035 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003742 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00655 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010855 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 OY9 A 1 301 8 OY9 TR1 . 
I 2 OY9 B 1 301 9 OY9 TR1 . 
J 2 OY9 C 1 301 10 OY9 TR1 . 
K 2 OY9 D 1 301 11 OY9 TR1 . 
L 2 OY9 E 1 301 12 OY9 TR1 . 
M 2 OY9 F 1 301 13 OY9 TR1 . 
N 2 OY9 G 1 301 14 OY9 TR1 . 
O 3 HOH A 1 401 663 HOH HOH . 
O 3 HOH A 2 402 81 HOH HOH . 
O 3 HOH A 3 403 650 HOH HOH . 
O 3 HOH A 4 404 662 HOH HOH . 
O 3 HOH A 5 405 621 HOH HOH . 
O 3 HOH A 6 406 605 HOH HOH . 
O 3 HOH A 7 407 603 HOH HOH . 
O 3 HOH A 8 408 675 HOH HOH . 
O 3 HOH A 9 409 417 HOH HOH . 
O 3 HOH A 10 410 597 HOH HOH . 
O 3 HOH A 11 411 220 HOH HOH . 
O 3 HOH A 12 412 623 HOH HOH . 
O 3 HOH A 13 413 604 HOH HOH . 
O 3 HOH A 14 414 11 HOH HOH . 
O 3 HOH A 15 415 639 HOH HOH . 
O 3 HOH A 16 416 652 HOH HOH . 
P 3 HOH B 1 401 637 HOH HOH . 
P 3 HOH B 2 402 601 HOH HOH . 
P 3 HOH B 3 403 466 HOH HOH . 
P 3 HOH B 4 404 645 HOH HOH . 
P 3 HOH B 5 405 30 HOH HOH . 
P 3 HOH B 6 406 269 HOH HOH . 
P 3 HOH B 7 407 664 HOH HOH . 
P 3 HOH B 8 408 611 HOH HOH . 
P 3 HOH B 9 409 661 HOH HOH . 
P 3 HOH B 10 410 202 HOH HOH . 
P 3 HOH B 11 411 479 HOH HOH . 
P 3 HOH B 12 412 627 HOH HOH . 
P 3 HOH B 13 413 350 HOH HOH . 
P 3 HOH B 14 414 362 HOH HOH . 
P 3 HOH B 15 415 646 HOH HOH . 
P 3 HOH B 16 416 610 HOH HOH . 
P 3 HOH B 17 417 671 HOH HOH . 
Q 3 HOH C 1 401 642 HOH HOH . 
Q 3 HOH C 2 402 617 HOH HOH . 
Q 3 HOH C 3 403 656 HOH HOH . 
Q 3 HOH C 4 404 600 HOH HOH . 
Q 3 HOH C 5 405 608 HOH HOH . 
Q 3 HOH C 6 406 665 HOH HOH . 
Q 3 HOH C 7 407 654 HOH HOH . 
Q 3 HOH C 8 408 644 HOH HOH . 
Q 3 HOH C 9 409 134 HOH HOH . 
Q 3 HOH C 10 410 615 HOH HOH . 
Q 3 HOH C 11 411 640 HOH HOH . 
Q 3 HOH C 12 412 630 HOH HOH . 
Q 3 HOH C 13 413 266 HOH HOH . 
Q 3 HOH C 14 414 622 HOH HOH . 
Q 3 HOH C 15 415 599 HOH HOH . 
Q 3 HOH C 16 416 655 HOH HOH . 
Q 3 HOH C 17 417 564 HOH HOH . 
Q 3 HOH C 18 418 13 HOH HOH . 
Q 3 HOH C 19 419 379 HOH HOH . 
Q 3 HOH C 20 420 657 HOH HOH . 
Q 3 HOH C 21 421 614 HOH HOH . 
Q 3 HOH C 22 422 497 HOH HOH . 
Q 3 HOH C 23 423 643 HOH HOH . 
Q 3 HOH C 24 424 188 HOH HOH . 
Q 3 HOH C 25 425 445 HOH HOH . 
R 3 HOH D 1 401 633 HOH HOH . 
R 3 HOH D 2 402 595 HOH HOH . 
R 3 HOH D 3 403 673 HOH HOH . 
R 3 HOH D 4 404 616 HOH HOH . 
R 3 HOH D 5 405 175 HOH HOH . 
R 3 HOH D 6 406 660 HOH HOH . 
R 3 HOH D 7 407 153 HOH HOH . 
R 3 HOH D 8 408 619 HOH HOH . 
R 3 HOH D 9 409 440 HOH HOH . 
R 3 HOH D 10 410 142 HOH HOH . 
R 3 HOH D 11 411 626 HOH HOH . 
R 3 HOH D 12 412 116 HOH HOH . 
R 3 HOH D 13 413 578 HOH HOH . 
R 3 HOH D 14 414 629 HOH HOH . 
R 3 HOH D 15 415 667 HOH HOH . 
R 3 HOH D 16 416 346 HOH HOH . 
R 3 HOH D 17 417 612 HOH HOH . 
R 3 HOH D 18 418 252 HOH HOH . 
S 3 HOH E 1 401 672 HOH HOH . 
S 3 HOH E 2 402 634 HOH HOH . 
S 3 HOH E 3 403 668 HOH HOH . 
S 3 HOH E 4 404 294 HOH HOH . 
S 3 HOH E 5 405 625 HOH HOH . 
S 3 HOH E 6 406 659 HOH HOH . 
S 3 HOH E 7 407 674 HOH HOH . 
S 3 HOH E 8 408 676 HOH HOH . 
S 3 HOH E 9 409 609 HOH HOH . 
S 3 HOH E 10 410 17 HOH HOH . 
S 3 HOH E 11 411 35 HOH HOH . 
S 3 HOH E 12 412 628 HOH HOH . 
S 3 HOH E 13 413 161 HOH HOH . 
S 3 HOH E 14 414 618 HOH HOH . 
S 3 HOH E 15 415 666 HOH HOH . 
S 3 HOH E 16 416 132 HOH HOH . 
S 3 HOH E 17 417 285 HOH HOH . 
T 3 HOH F 1 401 297 HOH HOH . 
T 3 HOH F 2 402 620 HOH HOH . 
T 3 HOH F 3 403 9 HOH HOH . 
T 3 HOH F 4 404 631 HOH HOH . 
T 3 HOH F 5 405 594 HOH HOH . 
T 3 HOH F 6 406 101 HOH HOH . 
T 3 HOH F 7 407 636 HOH HOH . 
T 3 HOH F 8 408 602 HOH HOH . 
T 3 HOH F 9 409 653 HOH HOH . 
T 3 HOH F 10 410 669 HOH HOH . 
T 3 HOH F 11 411 632 HOH HOH . 
T 3 HOH F 12 412 596 HOH HOH . 
T 3 HOH F 13 413 613 HOH HOH . 
T 3 HOH F 14 414 282 HOH HOH . 
T 3 HOH F 15 415 641 HOH HOH . 
U 3 HOH G 1 401 638 HOH HOH . 
U 3 HOH G 2 402 651 HOH HOH . 
U 3 HOH G 3 403 606 HOH HOH . 
U 3 HOH G 4 404 658 HOH HOH . 
U 3 HOH G 5 405 647 HOH HOH . 
U 3 HOH G 6 406 624 HOH HOH . 
U 3 HOH G 7 407 670 HOH HOH . 
U 3 HOH G 8 408 232 HOH HOH . 
U 3 HOH G 9 409 598 HOH HOH . 
U 3 HOH G 10 410 649 HOH HOH . 
U 3 HOH G 11 411 607 HOH HOH . 
U 3 HOH G 12 412 635 HOH HOH . 
U 3 HOH G 13 413 474 HOH HOH . 
U 3 HOH G 14 414 555 HOH HOH . 
U 3 HOH G 15 415 473 HOH HOH . 
U 3 HOH G 16 416 221 HOH HOH . 
U 3 HOH G 17 417 648 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C02 OY9 . . . J 2 -31.987 45.411 -22.25 1 49.29 ? C02 OY9 301 C 1 
HETATM 2 C C03 OY9 . . . J 2 -33.239 46.065 -22.838 1 44.71 ? C03 OY9 301 C 1 
HETATM 3 C C04 OY9 . . . J 2 -33.274 47.437 -22.87 1 45.76 ? C04 OY9 301 C 1 
HETATM 4 C C05 OY9 . . . J 2 -34.416 48.073 -23.414 1 50.1 ? C05 OY9 301 C 1 
HETATM 5 C C06 OY9 . . . J 2 -35.5 47.308 -23.909 1 49.54 ? C06 OY9 301 C 1 
HETATM 6 C C07 OY9 . . . J 2 -35.445 45.945 -23.872 1 50 ? C07 OY9 301 C 1 
HETATM 7 C C08 OY9 . . . J 2 -36.666 45.135 -24.42 1 51 ? C08 OY9 301 C 1 
HETATM 8 C C10 OY9 . . . J 2 -37.65 43.34 -23.665 1 56.87 ? C10 OY9 301 C 1 
HETATM 9 C C11 OY9 . . . J 2 -38.639 42.657 -22.609 1 47.58 ? C11 OY9 301 C 1 
HETATM 10 C C12 OY9 . . . J 2 -39.52 43.664 -21.854 1 47.41 ? C12 OY9 301 C 1 
HETATM 11 C C14 OY9 . . . J 2 -41.25 44.011 -20.326 1 53.11 ? C14 OY9 301 C 1 
HETATM 12 C C16 OY9 . . . J 2 -42.113 46.196 -19.645 1 49.43 ? C16 OY9 301 C 1 
HETATM 13 C C17 OY9 . . . J 2 -41.539 46.42 -18.228 1 51.69 ? C17 OY9 301 C 1 
HETATM 14 C C18 OY9 . . . J 2 -42.321 46.828 -17.179 1 51.46 ? C18 OY9 301 C 1 
HETATM 15 C C19 OY9 . . . J 2 -41.785 47.035 -15.893 1 49.39 ? C19 OY9 301 C 1 
HETATM 16 C C20 OY9 . . . J 2 -40.424 46.799 -15.704 1 55.32 ? C20 OY9 301 C 1 
HETATM 17 C C22 OY9 . . . J 2 -39.639 46.386 -16.753 1 59.23 ? C22 OY9 301 C 1 
HETATM 18 C C23 OY9 . . . J 2 -40.181 46.195 -18.023 1 55.51 ? C23 OY9 301 C 1 
HETATM 19 C C24 OY9 . . . J 2 -40.266 45.853 -21.273 1 57.79 ? C24 OY9 301 C 1 
HETATM 20 C C26 OY9 . . . J 2 -39.378 44.982 -22.024 1 51.66 ? C26 OY9 301 C 1 
HETATM 21 C C27 OY9 . . . J 2 -38.32 45.541 -23 1 52.58 ? C27 OY9 301 C 1 
HETATM 22 C C28 OY9 . . . J 2 -34.3 45.285 -23.327 1 45.79 ? C28 OY9 301 C 1 
HETATM 23 N N01 OY9 . . . J 2 -31.097 44.944 -21.826 1 52.67 ? N01 OY9 301 C 1 
HETATM 24 N N09 OY9 . . . J 2 -37.286 44.691 -23.398 1 57.13 ? N09 OY9 301 C 1 
HETATM 25 N N13 OY9 . . . J 2 -40.466 43.185 -20.999 1 49.72 ? N13 OY9 301 C 1 
HETATM 26 N N15 OY9 . . . J 2 -41.155 45.336 -20.46 1 55.53 ? N15 OY9 301 C 1 
HETATM 27 O O25 OY9 . . . J 2 -40.167 47.055 -21.398 1 56.86 ? O25 OY9 301 C 1 
HETATM 28 CL CL21 OY9 . . . J 2 -39.542 47.031 -13.995 1 57.05 ? CL21 OY9 301 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           397 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           28 
#