data_7UX5 # _model_server_result.job_id Yoc3CtnDbe9WgDcXfNVMQg _model_server_result.datetime_utc '2024-11-29 17:53:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ux5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 7UX5 # _exptl.entry_id 7UX5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.214 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(1,4-phenylene)diacetamide" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UX5 _cell.length_a 76.477 _cell.length_b 77.882 _cell.length_c 127.747 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UX5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 ? dimeric 2 author_defined_assembly 5 ? dimeric 2 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,M 1 1 B,D,N 2 1 E,F,O 3 1 G,H,P 4 1 I,J,Q 5 1 K,L,R 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 40 1_555 A SG CYS 98 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 24 C CYS 40 1_555 B SG CYS 98 C CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 E SG CYS 24 E CYS 40 1_555 E SG CYS 98 E CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 G SG CYS 24 G CYS 40 1_555 G SG CYS 98 G CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 I SG CYS 24 I CYS 40 1_555 I SG CYS 98 I CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 K SG CYS 24 K CYS 40 1_555 K SG CYS 98 K CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 C SG CYS 7 B CYS 7 1_555 M CH WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.856 ? covale ? covale2 C SG CYS 14 B CYS 14 1_555 M CK WHL . B WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? covale ? covale3 D SG CYS 7 D CYS 7 1_555 N CH WHL . D WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? covale ? covale4 D SG CYS 14 D CYS 14 1_555 N CK WHL . D WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? covale ? covale5 F SG CYS 7 F CYS 7 1_555 O CH WHL . F WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? covale ? covale6 F SG CYS 14 F CYS 14 1_555 O CK WHL . F WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale7 H SG CYS 7 H CYS 7 1_555 P CH WHL . H WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.827 ? covale ? covale8 H SG CYS 14 H CYS 14 1_555 P CK WHL . H WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? covale ? covale9 J SG CYS 7 J CYS 7 1_555 Q CH WHL . J WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? covale ? covale10 J SG CYS 14 J CYS 14 1_555 Q CK WHL . J WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? covale ? covale11 L SG CYS 7 L CYS 7 1_555 R CH WHL . L WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? covale ? covale12 L SG CYS 14 L CYS 14 1_555 R CK WHL . L WHL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? # _chem_comp.formula 'C10 H12 N2 O2' _chem_comp.formula_weight 192.214 _chem_comp.id WHL _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(1,4-phenylene)diacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK CJ WHL sing 374 n n CJ NB WHL sing 375 n n CJ OA WHL doub 376 n n NB CC WHL sing 377 n n CC CB WHL doub 378 n y CC CD WHL sing 379 n y CB CA WHL sing 380 n y CD CE WHL doub 381 n y CA CF WHL doub 382 n y CE CF WHL sing 383 n y CF NA WHL sing 384 n n OB CG WHL doub 385 n n NA CG WHL sing 386 n n CG CH WHL sing 387 n n CA H1 WHL sing 388 n n CB H2 WHL sing 389 n n NB H3 WHL sing 390 n n CD H4 WHL sing 391 n n CE H5 WHL sing 392 n n CH H6 WHL sing 393 n n CH H7 WHL sing 394 n n CH H8 WHL sing 395 n n CK H9 WHL sing 396 n n CK H10 WHL sing 397 n n CK H11 WHL sing 398 n n NA H12 WHL sing 399 n n # _atom_sites.entry_id 7UX5 _atom_sites.fract_transf_matrix[1][1] 0.013076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01284 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007828 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 WHL B 1 101 101 WHL WHL . N 3 WHL D 1 101 101 WHL WHL . O 3 WHL F 1 101 101 WHL WHL . P 3 WHL H 1 101 101 WHL WHL . Q 3 WHL J 1 101 101 WHL WHL . R 3 WHL L 1 101 101 WHL WHL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA WHL . . . P 3 -4.572 -7.295 -75.645 1 68.57 ? CA WHL 101 H 1 HETATM 2 C CB WHL . . . P 3 -3.518 -6.937 -76.472 1 68.63 ? CB WHL 101 H 1 HETATM 3 N NB WHL . . . P 3 -1.249 -7.358 -77.211 1 80.44 ? NB WHL 101 H 1 HETATM 4 O OB WHL . . . P 3 -4.742 -10.62 -72.964 1 63.84 ? OB WHL 101 H 1 HETATM 5 C CG WHL . . . P 3 -5.622 -9.801 -73.178 1 66.57 ? CG WHL 101 H 1 HETATM 6 C CD WHL . . . P 3 -2.195 -8.726 -75.571 1 72.23 ? CD WHL 101 H 1 HETATM 7 C CE WHL . . . P 3 -3.249 -9.086 -74.749 1 67.56 ? CE WHL 101 H 1 HETATM 8 C CH WHL . . . P 3 -6.929 -9.946 -72.478 1 66.79 ? CH WHL 101 H 1 HETATM 9 C CC WHL . . . P 3 -2.323 -7.65 -76.436 1 73.95 ? CC WHL 101 H 1 HETATM 10 C CF WHL . . . P 3 -4.436 -8.365 -74.765 1 68.06 ? CF WHL 101 H 1 HETATM 11 C CJ WHL . . . P 3 -1.163 -6.38 -78.11 1 82.34 ? CJ WHL 101 H 1 HETATM 12 C CK WHL . . . P 3 0.156 -6.336 -78.804 1 83.35 ? CK WHL 101 H 1 HETATM 13 N NA WHL . . . P 3 -5.534 -8.722 -73.964 1 68.12 ? NA WHL 101 H 1 HETATM 14 O OA WHL . . . P 3 -2.033 -5.566 -78.381 1 81.38 ? OA WHL 101 H 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #