data_7UXP # _model_server_result.job_id 2ZcEDCob9_rAhjyFpMhBDA _model_server_result.datetime_utc '2024-10-20 00:36:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7uxp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":102}' # _entry.id 7UXP # _exptl.entry_id 7UXP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.214 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N,N'-(1,4-phenylene)diacetamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7UXP _cell.length_a 83.31 _cell.length_b 85.889 _cell.length_c 86.859 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7UXP _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I 1 1 B,D,G,H,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 40 1_555 A SG CYS 98 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 B SG CYS 24 B CYS 40 1_555 B SG CYS 98 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 C C ACE 1 C ACE 0 1_555 C N ASP 2 C ASP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale2 C SG CYS 8 C CYS 7 1_555 F CH WHL . C WHL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.785 ? covale ? covale3 C SG CYS 15 C CYS 14 1_555 F CK WHL . C WHL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? covale ? covale4 D C ACE 1 D ACE 0 1_555 D N ASP 2 D ASP 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale5 D SG CYS 8 D CYS 7 1_555 H CH WHL . D WHL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.795 ? covale ? covale6 D SG CYS 15 D CYS 14 1_555 H CK WHL . D WHL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.87 ? # _chem_comp.formula 'C10 H12 N2 O2' _chem_comp.formula_weight 192.214 _chem_comp.id WHL _chem_comp.mon_nstd_flag . _chem_comp.name "N,N'-(1,4-phenylene)diacetamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CK CJ WHL sing 384 n n CJ NB WHL sing 385 n n CJ OA WHL doub 386 n n NB CC WHL sing 387 n n CC CB WHL doub 388 n y CC CD WHL sing 389 n y CB CA WHL sing 390 n y CD CE WHL doub 391 n y CA CF WHL doub 392 n y CE CF WHL sing 393 n y CF NA WHL sing 394 n n OB CG WHL doub 395 n n NA CG WHL sing 396 n n CG CH WHL sing 397 n n CA H1 WHL sing 398 n n CB H2 WHL sing 399 n n NB H3 WHL sing 400 n n CD H4 WHL sing 401 n n CE H5 WHL sing 402 n n CH H6 WHL sing 403 n n CH H7 WHL sing 404 n n CH H8 WHL sing 405 n n CK H9 WHL sing 406 n n CK H10 WHL sing 407 n n CK H11 WHL sing 408 n n NA H12 WHL sing 409 n n # _atom_sites.entry_id 7UXP _atom_sites.fract_transf_matrix[1][1] 0.012003 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011513 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NH2 C 1 101 18 NH2 NH2 . F 4 WHL C 1 102 101 WHL WHL . G 3 NH2 D 1 101 18 NH2 NH2 . H 4 WHL D 1 102 101 WHL WHL . I 5 HOH A 1 201 3 HOH HOH . I 5 HOH A 2 202 4 HOH HOH . J 5 HOH B 1 201 1 HOH HOH . K 5 HOH D 1 201 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA WHL . . . F 4 41.277 12.997 40.434 1 39.63 ? CA WHL 102 C 1 HETATM 2 C CB WHL . . . F 4 40.939 13.213 41.75 1 41.65 ? CB WHL 102 C 1 HETATM 3 N NB WHL . . . F 4 40.005 14.564 43.524 1 37.55 ? NB WHL 102 C 1 HETATM 4 O OB WHL . . . F 4 41.435 11.496 38.112 1 46.96 ? OB WHL 102 C 1 HETATM 5 C CG WHL . . . F 4 41.543 12.465 37.462 1 44.1 ? CG WHL 102 C 1 HETATM 6 C CD WHL . . . F 4 39.991 15.325 41.168 1 40.17 ? CD WHL 102 C 1 HETATM 7 C CE WHL . . . F 4 40.331 15.114 39.85 1 42.43 ? CE WHL 102 C 1 HETATM 8 C CH WHL . . . F 4 41.887 12.348 35.977 1 38.87 ? CH WHL 102 C 1 HETATM 9 C CC WHL . . . F 4 40.306 14.38 42.125 1 43.1 ? CC WHL 102 C 1 HETATM 10 C CF WHL . . . F 4 40.975 13.948 39.475 1 44.57 ? CF WHL 102 C 1 HETATM 11 C CJ WHL . . . F 4 39.789 15.88 44.05 1 47.55 ? CJ WHL 102 C 1 HETATM 12 C CK WHL . . . F 4 39.484 16.037 45.532 1 52.95 ? CK WHL 102 C 1 HETATM 13 N NA WHL . . . F 4 41.321 13.761 38.066 1 49.35 ? NA WHL 102 C 1 HETATM 14 O OA WHL . . . F 4 39.815 16.835 43.355 1 54 ? OA WHL 102 C 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #