data_7UZP
#
_model_server_result.job_id            0cABU1xMKlXx1j23F82KHQ 
_model_server_result.datetime_utc      '2024-11-22 22:08:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7uzp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":101}' 
#
_entry.id    7UZP 
#
_exptl.entry_id    7UZP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.57 
_cell.angle_gamma         90 
_cell.entry_id            7UZP 
_cell.length_a            101.65 
_cell.length_b            58.949 
_cell.length_c            77.924 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7UZP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 21 A CYS 48 1_555 A SG CYS 46 A CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 37 A CYS 64 1_555 A SG CYS 77 A CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 60 A CYS 87 1_555 A SG CYS 99 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf4 C SG CYS 21 C CYS 48 1_555 C SG CYS 46 C CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 C SG CYS 37 C CYS 64 1_555 C SG CYS 77 C CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 C SG CYS 60 C CYS 87 1_555 C SG CYS 99 C CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf7 E SG CYS 21 E CYS 48 1_555 E SG CYS 46 E CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf8 E SG CYS 37 E CYS 64 1_555 E SG CYS 77 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf9 E SG CYS 60 E CYS 87 1_555 E SG CYS 99 E CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
covale ? covale1 B C PHE 9 B PHE 23 1_555 B N XCP 10 B XCP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 B C XCP 10 B XCP 24 1_555 B N HIS 11 B HIS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 B C LEU 13 B LEU 27 1_555 B N XCP 14 B XCP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 B C XCP 14 B XCP 28 1_555 B N ALA 15 B ALA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 B C GLU 16 B GLU 30 1_555 B N XCP 17 B XCP 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 B C XCP 17 B XCP 31 1_555 B N HIS 18 B HIS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale7 D C PHE 9 D PHE 23 1_555 D N XCP 10 D XCP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 D C XCP 10 D XCP 24 1_555 D N HIS 11 D HIS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 D C LEU 13 D LEU 27 1_555 D N XCP 14 D XCP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 D C XCP 14 D XCP 28 1_555 D N ALA 15 D ALA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale11 D C GLU 16 D GLU 30 1_555 D N XCP 17 D XCP 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale12 D C XCP 17 D XCP 31 1_555 D N HIS 18 D HIS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale13 F C PHE 9 F PHE 23 1_555 F N XCP 10 F XCP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale14 F C XCP 10 F XCP 24 1_555 F N HIS 11 F HIS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale15 F C LEU 13 F LEU 27 1_555 F N XCP 14 F XCP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale16 F C XCP 14 F XCP 28 1_555 F N ALA 15 F ALA 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale17 F C GLU 16 F GLU 30 1_555 F N XCP 17 F XCP 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale18 F C XCP 17 F XCP 31 1_555 F N HIS 18 F HIS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 B NE2 HIS 12 B HIS 26 1_555 H ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc2 H ZN ZN . B ZN 101 1_555 K O HOH . B HOH 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc3 H ZN ZN . B ZN 101 1_555 D NE2 HIS 12 D HIS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc4 H ZN ZN . B ZN 101 1_555 F NE2 HIS 12 F HIS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7UZP 
_atom_sites.fract_transf_matrix[1][1]    0.009838 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005136 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016964 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014477 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 EDO A 1 201 2 EDO EDO . 
H 4 ZN B 1 101 1 ZN ZN . 
I 3 EDO F 1 101 1 EDO EDO . 
J 5 HOH A 1 301 120 HOH HOH . 
J 5 HOH A 2 302 196 HOH HOH . 
J 5 HOH A 3 303 215 HOH HOH . 
J 5 HOH A 4 304 81 HOH HOH . 
J 5 HOH A 5 305 21 HOH HOH . 
J 5 HOH A 6 306 57 HOH HOH . 
J 5 HOH A 7 307 210 HOH HOH . 
J 5 HOH A 8 308 175 HOH HOH . 
J 5 HOH A 9 309 8 HOH HOH . 
J 5 HOH A 10 310 23 HOH HOH . 
J 5 HOH A 11 311 167 HOH HOH . 
J 5 HOH A 12 312 47 HOH HOH . 
J 5 HOH A 13 313 59 HOH HOH . 
J 5 HOH A 14 314 40 HOH HOH . 
J 5 HOH A 15 315 132 HOH HOH . 
J 5 HOH A 16 316 45 HOH HOH . 
J 5 HOH A 17 317 4 HOH HOH . 
J 5 HOH A 18 318 130 HOH HOH . 
J 5 HOH A 19 319 26 HOH HOH . 
J 5 HOH A 20 320 13 HOH HOH . 
J 5 HOH A 21 321 92 HOH HOH . 
J 5 HOH A 22 322 66 HOH HOH . 
J 5 HOH A 23 323 83 HOH HOH . 
J 5 HOH A 24 324 173 HOH HOH . 
J 5 HOH A 25 325 67 HOH HOH . 
J 5 HOH A 26 326 179 HOH HOH . 
J 5 HOH A 27 327 122 HOH HOH . 
J 5 HOH A 28 328 94 HOH HOH . 
J 5 HOH A 29 329 181 HOH HOH . 
J 5 HOH A 30 330 7 HOH HOH . 
J 5 HOH A 31 331 1 HOH HOH . 
J 5 HOH A 32 332 183 HOH HOH . 
J 5 HOH A 33 333 46 HOH HOH . 
J 5 HOH A 34 334 70 HOH HOH . 
J 5 HOH A 35 335 78 HOH HOH . 
J 5 HOH A 36 336 28 HOH HOH . 
J 5 HOH A 37 337 176 HOH HOH . 
J 5 HOH A 38 338 55 HOH HOH . 
J 5 HOH A 39 339 213 HOH HOH . 
J 5 HOH A 40 340 22 HOH HOH . 
J 5 HOH A 41 341 180 HOH HOH . 
J 5 HOH A 42 342 174 HOH HOH . 
K 5 HOH B 1 201 89 HOH HOH . 
K 5 HOH B 2 202 37 HOH HOH . 
K 5 HOH B 3 203 126 HOH HOH . 
K 5 HOH B 4 204 123 HOH HOH . 
K 5 HOH B 5 205 163 HOH HOH . 
K 5 HOH B 6 206 121 HOH HOH . 
K 5 HOH B 7 207 200 HOH HOH . 
L 5 HOH C 1 201 91 HOH HOH . 
L 5 HOH C 2 202 214 HOH HOH . 
L 5 HOH C 3 203 103 HOH HOH . 
L 5 HOH C 4 204 216 HOH HOH . 
L 5 HOH C 5 205 195 HOH HOH . 
L 5 HOH C 6 206 219 HOH HOH . 
L 5 HOH C 7 207 25 HOH HOH . 
L 5 HOH C 8 208 14 HOH HOH . 
L 5 HOH C 9 209 18 HOH HOH . 
L 5 HOH C 10 210 24 HOH HOH . 
L 5 HOH C 11 211 41 HOH HOH . 
L 5 HOH C 12 212 9 HOH HOH . 
L 5 HOH C 13 213 187 HOH HOH . 
L 5 HOH C 14 214 62 HOH HOH . 
L 5 HOH C 15 215 201 HOH HOH . 
L 5 HOH C 16 216 198 HOH HOH . 
L 5 HOH C 17 217 60 HOH HOH . 
L 5 HOH C 18 218 17 HOH HOH . 
L 5 HOH C 19 219 86 HOH HOH . 
L 5 HOH C 20 220 84 HOH HOH . 
L 5 HOH C 21 221 50 HOH HOH . 
L 5 HOH C 22 222 35 HOH HOH . 
L 5 HOH C 23 223 199 HOH HOH . 
L 5 HOH C 24 224 27 HOH HOH . 
L 5 HOH C 25 225 184 HOH HOH . 
L 5 HOH C 26 226 5 HOH HOH . 
L 5 HOH C 27 227 44 HOH HOH . 
L 5 HOH C 28 228 116 HOH HOH . 
L 5 HOH C 29 229 72 HOH HOH . 
L 5 HOH C 30 230 29 HOH HOH . 
L 5 HOH C 31 231 49 HOH HOH . 
L 5 HOH C 32 232 79 HOH HOH . 
L 5 HOH C 33 233 65 HOH HOH . 
L 5 HOH C 34 234 69 HOH HOH . 
L 5 HOH C 35 235 159 HOH HOH . 
L 5 HOH C 36 236 48 HOH HOH . 
L 5 HOH C 37 237 56 HOH HOH . 
L 5 HOH C 38 238 96 HOH HOH . 
L 5 HOH C 39 239 32 HOH HOH . 
L 5 HOH C 40 240 160 HOH HOH . 
L 5 HOH C 41 241 12 HOH HOH . 
L 5 HOH C 42 242 194 HOH HOH . 
L 5 HOH C 43 243 142 HOH HOH . 
L 5 HOH C 44 244 143 HOH HOH . 
L 5 HOH C 45 245 144 HOH HOH . 
M 5 HOH D 1 101 98 HOH HOH . 
M 5 HOH D 2 102 77 HOH HOH . 
M 5 HOH D 3 103 30 HOH HOH . 
M 5 HOH D 4 104 155 HOH HOH . 
M 5 HOH D 5 105 15 HOH HOH . 
M 5 HOH D 6 106 202 HOH HOH . 
M 5 HOH D 7 107 217 HOH HOH . 
N 5 HOH E 1 201 211 HOH HOH . 
N 5 HOH E 2 202 212 HOH HOH . 
N 5 HOH E 3 203 218 HOH HOH . 
N 5 HOH E 4 204 129 HOH HOH . 
N 5 HOH E 5 205 2 HOH HOH . 
N 5 HOH E 6 206 101 HOH HOH . 
N 5 HOH E 7 207 11 HOH HOH . 
N 5 HOH E 8 208 107 HOH HOH . 
N 5 HOH E 9 209 34 HOH HOH . 
N 5 HOH E 10 210 170 HOH HOH . 
N 5 HOH E 11 211 190 HOH HOH . 
N 5 HOH E 12 212 31 HOH HOH . 
N 5 HOH E 13 213 19 HOH HOH . 
N 5 HOH E 14 214 3 HOH HOH . 
N 5 HOH E 15 215 188 HOH HOH . 
N 5 HOH E 16 216 111 HOH HOH . 
N 5 HOH E 17 217 166 HOH HOH . 
N 5 HOH E 18 218 52 HOH HOH . 
N 5 HOH E 19 219 36 HOH HOH . 
N 5 HOH E 20 220 64 HOH HOH . 
N 5 HOH E 21 221 145 HOH HOH . 
N 5 HOH E 22 222 68 HOH HOH . 
N 5 HOH E 23 223 33 HOH HOH . 
N 5 HOH E 24 224 71 HOH HOH . 
N 5 HOH E 25 225 149 HOH HOH . 
N 5 HOH E 26 226 20 HOH HOH . 
N 5 HOH E 27 227 115 HOH HOH . 
N 5 HOH E 28 228 10 HOH HOH . 
N 5 HOH E 29 229 16 HOH HOH . 
N 5 HOH E 30 230 39 HOH HOH . 
N 5 HOH E 31 231 110 HOH HOH . 
N 5 HOH E 32 232 6 HOH HOH . 
N 5 HOH E 33 233 106 HOH HOH . 
N 5 HOH E 34 234 209 HOH HOH . 
N 5 HOH E 35 235 189 HOH HOH . 
N 5 HOH E 36 236 105 HOH HOH . 
N 5 HOH E 37 237 85 HOH HOH . 
N 5 HOH E 38 238 157 HOH HOH . 
N 5 HOH E 39 239 203 HOH HOH . 
O 5 HOH F 1 201 75 HOH HOH . 
O 5 HOH F 2 202 74 HOH HOH . 
O 5 HOH F 3 203 162 HOH HOH . 
O 5 HOH F 4 204 63 HOH HOH . 
O 5 HOH F 5 205 150 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 3 4.45 37.191 28.398 1 66.59 ? C1 EDO 101 F 1 
HETATM 2 O O1 EDO . . . I 3 5.275 37.784 27.386 1 63.9 ? O1 EDO 101 F 1 
HETATM 3 C C2 EDO . . . I 3 3.477 36.201 27.766 1 68.09 ? C2 EDO 101 F 1 
HETATM 4 O O2 EDO . . . I 3 2.535 35.761 28.752 1 69.3 ? O2 EDO 101 F 1 
HETATM 5 H H11 EDO . . . I 3 3.894 37.97 28.923 1 80.24 ? H11 EDO 101 F 1 
HETATM 6 H H12 EDO . . . I 3 5.077 36.675 29.128 1 80.24 ? H12 EDO 101 F 1 
HETATM 7 H HO1 EDO . . . I 3 5.879 38.419 27.794 1 77.02 ? HO1 EDO 101 F 1 
HETATM 8 H H21 EDO . . . I 3 2.95 36.678 26.937 1 82.05 ? H21 EDO 101 F 1 
HETATM 9 H H22 EDO . . . I 3 4.025 35.345 27.368 1 82.05 ? H22 EDO 101 F 1 
HETATM 10 H HO2 EDO . . . I 3 1.943 35.104 28.361 1 83.5 ? HO2 EDO 101 F 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#