data_7V13
#
_model_server_result.job_id            KhtqRd_6Obvji15IApAcwg 
_model_server_result.datetime_utc      '2024-10-11 13:25:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7v13 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":701}' 
#
_entry.id    7V13 
#
_exptl.entry_id    7V13 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7V13 
_cell.length_a            59.25 
_cell.length_b            59.51 
_cell.length_c            66.76 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7V13 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 29 A CYS 416 1_555 A SG CYS 45 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 A SG CYS 127 A CYS 514 1_555 A SG CYS 194 A CYS 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf3 A SG CYS 158 A CYS 545 1_555 A SG CYS 173 A CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf4 A SG CYS 184 A CYS 571 1_555 A SG CYS 212 A CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 70 n n 
C1 O2 CIT sing 71 n n 
C1 C2 CIT sing 72 n n 
O2 HO2 CIT sing 73 n n 
C2 C3 CIT sing 74 n n 
C2 H21 CIT sing 75 n n 
C2 H22 CIT sing 76 n n 
C3 O7 CIT sing 77 n n 
C3 C4 CIT sing 78 n n 
C3 C6 CIT sing 79 n n 
O7 HO7 CIT sing 80 n n 
C4 C5 CIT sing 81 n n 
C4 H41 CIT sing 82 n n 
C4 H42 CIT sing 83 n n 
C5 O3 CIT doub 84 n n 
C5 O4 CIT sing 85 n n 
O4 HO4 CIT sing 86 n n 
C6 O5 CIT doub 87 n n 
C6 O6 CIT sing 88 n n 
O6 HO6 CIT sing 89 n n 
#
_atom_sites.entry_id                     7V13 
_atom_sites.fract_transf_matrix[1][1]    0.016878 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016804 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014979 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CIT A 1 701 624 CIT CIT . 
C 3 ORF A 1 702 625 ORF LIG . 
D 4 HOH A 1 801 664 HOH HOH . 
D 4 HOH A 2 802 647 HOH HOH . 
D 4 HOH A 3 803 682 HOH HOH . 
D 4 HOH A 4 804 774 HOH HOH . 
D 4 HOH A 5 805 705 HOH HOH . 
D 4 HOH A 6 806 768 HOH HOH . 
D 4 HOH A 7 807 687 HOH HOH . 
D 4 HOH A 8 808 696 HOH HOH . 
D 4 HOH A 9 809 689 HOH HOH . 
D 4 HOH A 10 810 750 HOH HOH . 
D 4 HOH A 11 811 644 HOH HOH . 
D 4 HOH A 12 812 674 HOH HOH . 
D 4 HOH A 13 813 733 HOH HOH . 
D 4 HOH A 14 814 645 HOH HOH . 
D 4 HOH A 15 815 672 HOH HOH . 
D 4 HOH A 16 816 679 HOH HOH . 
D 4 HOH A 17 817 765 HOH HOH . 
D 4 HOH A 18 818 721 HOH HOH . 
D 4 HOH A 19 819 685 HOH HOH . 
D 4 HOH A 20 820 632 HOH HOH . 
D 4 HOH A 21 821 779 HOH HOH . 
D 4 HOH A 22 822 646 HOH HOH . 
D 4 HOH A 23 823 760 HOH HOH . 
D 4 HOH A 24 824 683 HOH HOH . 
D 4 HOH A 25 825 626 HOH HOH . 
D 4 HOH A 26 826 728 HOH HOH . 
D 4 HOH A 27 827 656 HOH HOH . 
D 4 HOH A 28 828 652 HOH HOH . 
D 4 HOH A 29 829 673 HOH HOH . 
D 4 HOH A 30 830 634 HOH HOH . 
D 4 HOH A 31 831 629 HOH HOH . 
D 4 HOH A 32 832 694 HOH HOH . 
D 4 HOH A 33 833 725 HOH HOH . 
D 4 HOH A 34 834 699 HOH HOH . 
D 4 HOH A 35 835 734 HOH HOH . 
D 4 HOH A 36 836 630 HOH HOH . 
D 4 HOH A 37 837 637 HOH HOH . 
D 4 HOH A 38 838 777 HOH HOH . 
D 4 HOH A 39 839 755 HOH HOH . 
D 4 HOH A 40 840 736 HOH HOH . 
D 4 HOH A 41 841 635 HOH HOH . 
D 4 HOH A 42 842 651 HOH HOH . 
D 4 HOH A 43 843 738 HOH HOH . 
D 4 HOH A 44 844 675 HOH HOH . 
D 4 HOH A 45 845 747 HOH HOH . 
D 4 HOH A 46 846 719 HOH HOH . 
D 4 HOH A 47 847 731 HOH HOH . 
D 4 HOH A 48 848 636 HOH HOH . 
D 4 HOH A 49 849 723 HOH HOH . 
D 4 HOH A 50 850 740 HOH HOH . 
D 4 HOH A 51 851 693 HOH HOH . 
D 4 HOH A 52 852 762 HOH HOH . 
D 4 HOH A 53 853 748 HOH HOH . 
D 4 HOH A 54 854 714 HOH HOH . 
D 4 HOH A 55 855 643 HOH HOH . 
D 4 HOH A 56 856 653 HOH HOH . 
D 4 HOH A 57 857 640 HOH HOH . 
D 4 HOH A 58 858 631 HOH HOH . 
D 4 HOH A 59 859 735 HOH HOH . 
D 4 HOH A 60 860 787 HOH HOH . 
D 4 HOH A 61 861 741 HOH HOH . 
D 4 HOH A 62 862 769 HOH HOH . 
D 4 HOH A 63 863 627 HOH HOH . 
D 4 HOH A 64 864 648 HOH HOH . 
D 4 HOH A 65 865 642 HOH HOH . 
D 4 HOH A 66 866 753 HOH HOH . 
D 4 HOH A 67 867 655 HOH HOH . 
D 4 HOH A 68 868 669 HOH HOH . 
D 4 HOH A 69 869 759 HOH HOH . 
D 4 HOH A 70 870 772 HOH HOH . 
D 4 HOH A 71 871 743 HOH HOH . 
D 4 HOH A 72 872 707 HOH HOH . 
D 4 HOH A 73 873 757 HOH HOH . 
D 4 HOH A 74 874 764 HOH HOH . 
D 4 HOH A 75 875 671 HOH HOH . 
D 4 HOH A 76 876 742 HOH HOH . 
D 4 HOH A 77 877 709 HOH HOH . 
D 4 HOH A 78 878 649 HOH HOH . 
D 4 HOH A 79 879 665 HOH HOH . 
D 4 HOH A 80 880 670 HOH HOH . 
D 4 HOH A 81 881 706 HOH HOH . 
D 4 HOH A 82 882 658 HOH HOH . 
D 4 HOH A 83 883 676 HOH HOH . 
D 4 HOH A 84 884 793 HOH HOH . 
D 4 HOH A 85 885 628 HOH HOH . 
D 4 HOH A 86 886 650 HOH HOH . 
D 4 HOH A 87 887 763 HOH HOH . 
D 4 HOH A 88 888 681 HOH HOH . 
D 4 HOH A 89 889 691 HOH HOH . 
D 4 HOH A 90 890 692 HOH HOH . 
D 4 HOH A 91 891 684 HOH HOH . 
D 4 HOH A 92 892 633 HOH HOH . 
D 4 HOH A 93 893 695 HOH HOH . 
D 4 HOH A 94 894 702 HOH HOH . 
D 4 HOH A 95 895 639 HOH HOH . 
D 4 HOH A 96 896 713 HOH HOH . 
D 4 HOH A 97 897 712 HOH HOH . 
D 4 HOH A 98 898 710 HOH HOH . 
D 4 HOH A 99 899 638 HOH HOH . 
D 4 HOH A 100 900 703 HOH HOH . 
D 4 HOH A 101 901 686 HOH HOH . 
D 4 HOH A 102 902 666 HOH HOH . 
D 4 HOH A 103 903 697 HOH HOH . 
D 4 HOH A 104 904 752 HOH HOH . 
D 4 HOH A 105 905 718 HOH HOH . 
D 4 HOH A 106 906 745 HOH HOH . 
D 4 HOH A 107 907 716 HOH HOH . 
D 4 HOH A 108 908 720 HOH HOH . 
D 4 HOH A 109 909 698 HOH HOH . 
D 4 HOH A 110 910 751 HOH HOH . 
D 4 HOH A 111 911 678 HOH HOH . 
D 4 HOH A 112 912 641 HOH HOH . 
D 4 HOH A 113 913 756 HOH HOH . 
D 4 HOH A 114 914 724 HOH HOH . 
D 4 HOH A 115 915 730 HOH HOH . 
D 4 HOH A 116 916 661 HOH HOH . 
D 4 HOH A 117 917 726 HOH HOH . 
D 4 HOH A 118 918 700 HOH HOH . 
D 4 HOH A 119 919 744 HOH HOH . 
D 4 HOH A 120 920 663 HOH HOH . 
D 4 HOH A 121 921 667 HOH HOH . 
D 4 HOH A 122 922 659 HOH HOH . 
D 4 HOH A 123 923 717 HOH HOH . 
D 4 HOH A 124 924 739 HOH HOH . 
D 4 HOH A 125 925 688 HOH HOH . 
D 4 HOH A 126 926 727 HOH HOH . 
D 4 HOH A 127 927 737 HOH HOH . 
D 4 HOH A 128 928 677 HOH HOH . 
D 4 HOH A 129 929 746 HOH HOH . 
D 4 HOH A 130 930 722 HOH HOH . 
D 4 HOH A 131 931 715 HOH HOH . 
D 4 HOH A 132 932 766 HOH HOH . 
D 4 HOH A 133 933 789 HOH HOH . 
D 4 HOH A 134 934 704 HOH HOH . 
D 4 HOH A 135 935 782 HOH HOH . 
D 4 HOH A 136 936 690 HOH HOH . 
D 4 HOH A 137 937 668 HOH HOH . 
D 4 HOH A 138 938 767 HOH HOH . 
D 4 HOH A 139 939 785 HOH HOH . 
D 4 HOH A 140 940 754 HOH HOH . 
D 4 HOH A 141 941 729 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . B 2 -15.42 1.263 -26.736 0.85 41.36 ? C1 CIT 701 A 1 
HETATM 2 O O1 CIT . . . B 2 -14.6 1.852 -27.468 0.85 44.57 ? O1 CIT 701 A 1 
HETATM 3 O O2 CIT . . . B 2 -16.638 1.544 -26.79 0.85 41.32 ? O2 CIT 701 A 1 
HETATM 4 C C2 CIT . . . B 2 -14.911 0.222 -25.783 0.85 31.58 ? C2 CIT 701 A 1 
HETATM 5 C C3 CIT . . . B 2 -14.911 -1.149 -26.439 0.85 36.99 ? C3 CIT 701 A 1 
HETATM 6 O O7 CIT . . . B 2 -13.92 -1.148 -27.5 0.85 42.89 ? O7 CIT 701 A 1 
HETATM 7 C C4 CIT . . . B 2 -14.575 -2.175 -25.371 0.85 33.09 ? C4 CIT 701 A 1 
HETATM 8 C C5 CIT . . . B 2 -14.331 -3.506 -26.022 0.85 41.02 ? C5 CIT 701 A 1 
HETATM 9 O O3 CIT . . . B 2 -14.149 -3.594 -27.257 0.85 43.6 ? O3 CIT 701 A 1 
HETATM 10 O O4 CIT . . . B 2 -14.321 -4.531 -25.321 0.85 37.91 ? O4 CIT 701 A 1 
HETATM 11 C C6 CIT . . . B 2 -16.265 -1.472 -27.051 0.85 46.62 ? C6 CIT 701 A 1 
HETATM 12 O O5 CIT . . . B 2 -16.572 -1.037 -28.182 0.85 53.29 ? O5 CIT 701 A 1 
HETATM 13 O O6 CIT . . . B 2 -17.083 -2.182 -26.425 0.85 52.67 ? O6 CIT 701 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           13 
#