data_7V17 # _model_server_result.job_id voJebP6BcfIJbp4LphEwmQ _model_server_result.datetime_utc '2024-10-11 13:28:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 7V17 # _exptl.entry_id 7V17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7V17 _cell.length_a 59.37 _cell.length_b 59.58 _cell.length_c 66.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 416 1_555 A SG CYS 45 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 A SG CYS 127 A CYS 514 1_555 A SG CYS 194 A CYS 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf3 A SG CYS 158 A CYS 545 1_555 A SG CYS 173 A CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 184 A CYS 571 1_555 A SG CYS 212 A CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 7V17 _atom_sites.fract_transf_matrix[1][1] 0.016844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016784 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 701 624 CIT CIT . C 3 OTL A 1 702 625 OTL LIG . D 4 HOH A 1 801 664 HOH HOH . D 4 HOH A 2 802 679 HOH HOH . D 4 HOH A 3 803 646 HOH HOH . D 4 HOH A 4 804 692 HOH HOH . D 4 HOH A 5 805 763 HOH HOH . D 4 HOH A 6 806 716 HOH HOH . D 4 HOH A 7 807 669 HOH HOH . D 4 HOH A 8 808 785 HOH HOH . D 4 HOH A 9 809 657 HOH HOH . D 4 HOH A 10 810 760 HOH HOH . D 4 HOH A 11 811 730 HOH HOH . D 4 HOH A 12 812 671 HOH HOH . D 4 HOH A 13 813 774 HOH HOH . D 4 HOH A 14 814 789 HOH HOH . D 4 HOH A 15 815 676 HOH HOH . D 4 HOH A 16 816 769 HOH HOH . D 4 HOH A 17 817 758 HOH HOH . D 4 HOH A 18 818 650 HOH HOH . D 4 HOH A 19 819 695 HOH HOH . D 4 HOH A 20 820 706 HOH HOH . D 4 HOH A 21 821 640 HOH HOH . D 4 HOH A 22 822 654 HOH HOH . D 4 HOH A 23 823 753 HOH HOH . D 4 HOH A 24 824 743 HOH HOH . D 4 HOH A 25 825 633 HOH HOH . D 4 HOH A 26 826 798 HOH HOH . D 4 HOH A 27 827 761 HOH HOH . D 4 HOH A 28 828 735 HOH HOH . D 4 HOH A 29 829 632 HOH HOH . D 4 HOH A 30 830 729 HOH HOH . D 4 HOH A 31 831 707 HOH HOH . D 4 HOH A 32 832 693 HOH HOH . D 4 HOH A 33 833 631 HOH HOH . D 4 HOH A 34 834 745 HOH HOH . D 4 HOH A 35 835 635 HOH HOH . D 4 HOH A 36 836 629 HOH HOH . D 4 HOH A 37 837 768 HOH HOH . D 4 HOH A 38 838 630 HOH HOH . D 4 HOH A 39 839 638 HOH HOH . D 4 HOH A 40 840 626 HOH HOH . D 4 HOH A 41 841 681 HOH HOH . D 4 HOH A 42 842 653 HOH HOH . D 4 HOH A 43 843 647 HOH HOH . D 4 HOH A 44 844 689 HOH HOH . D 4 HOH A 45 845 663 HOH HOH . D 4 HOH A 46 846 648 HOH HOH . D 4 HOH A 47 847 782 HOH HOH . D 4 HOH A 48 848 686 HOH HOH . D 4 HOH A 49 849 645 HOH HOH . D 4 HOH A 50 850 658 HOH HOH . D 4 HOH A 51 851 792 HOH HOH . D 4 HOH A 52 852 767 HOH HOH . D 4 HOH A 53 853 717 HOH HOH . D 4 HOH A 54 854 644 HOH HOH . D 4 HOH A 55 855 718 HOH HOH . D 4 HOH A 56 856 732 HOH HOH . D 4 HOH A 57 857 712 HOH HOH . D 4 HOH A 58 858 641 HOH HOH . D 4 HOH A 59 859 723 HOH HOH . D 4 HOH A 60 860 672 HOH HOH . D 4 HOH A 61 861 748 HOH HOH . D 4 HOH A 62 862 637 HOH HOH . D 4 HOH A 63 863 702 HOH HOH . D 4 HOH A 64 864 747 HOH HOH . D 4 HOH A 65 865 708 HOH HOH . D 4 HOH A 66 866 636 HOH HOH . D 4 HOH A 67 867 667 HOH HOH . D 4 HOH A 68 868 662 HOH HOH . D 4 HOH A 69 869 778 HOH HOH . D 4 HOH A 70 870 680 HOH HOH . D 4 HOH A 71 871 722 HOH HOH . D 4 HOH A 72 872 628 HOH HOH . D 4 HOH A 73 873 627 HOH HOH . D 4 HOH A 74 874 655 HOH HOH . D 4 HOH A 75 875 779 HOH HOH . D 4 HOH A 76 876 659 HOH HOH . D 4 HOH A 77 877 754 HOH HOH . D 4 HOH A 78 878 757 HOH HOH . D 4 HOH A 79 879 678 HOH HOH . D 4 HOH A 80 880 719 HOH HOH . D 4 HOH A 81 881 696 HOH HOH . D 4 HOH A 82 882 684 HOH HOH . D 4 HOH A 83 883 649 HOH HOH . D 4 HOH A 84 884 739 HOH HOH . D 4 HOH A 85 885 701 HOH HOH . D 4 HOH A 86 886 688 HOH HOH . D 4 HOH A 87 887 677 HOH HOH . D 4 HOH A 88 888 711 HOH HOH . D 4 HOH A 89 889 742 HOH HOH . D 4 HOH A 90 890 697 HOH HOH . D 4 HOH A 91 891 714 HOH HOH . D 4 HOH A 92 892 687 HOH HOH . D 4 HOH A 93 893 675 HOH HOH . D 4 HOH A 94 894 793 HOH HOH . D 4 HOH A 95 895 756 HOH HOH . D 4 HOH A 96 896 736 HOH HOH . D 4 HOH A 97 897 683 HOH HOH . D 4 HOH A 98 898 651 HOH HOH . D 4 HOH A 99 899 634 HOH HOH . D 4 HOH A 100 900 710 HOH HOH . D 4 HOH A 101 901 787 HOH HOH . D 4 HOH A 102 902 738 HOH HOH . D 4 HOH A 103 903 656 HOH HOH . D 4 HOH A 104 904 700 HOH HOH . D 4 HOH A 105 905 698 HOH HOH . D 4 HOH A 106 906 639 HOH HOH . D 4 HOH A 107 907 682 HOH HOH . D 4 HOH A 108 908 694 HOH HOH . D 4 HOH A 109 909 777 HOH HOH . D 4 HOH A 110 910 766 HOH HOH . D 4 HOH A 111 911 775 HOH HOH . D 4 HOH A 112 912 734 HOH HOH . D 4 HOH A 113 913 740 HOH HOH . D 4 HOH A 114 914 728 HOH HOH . D 4 HOH A 115 915 685 HOH HOH . D 4 HOH A 116 916 704 HOH HOH . D 4 HOH A 117 917 642 HOH HOH . D 4 HOH A 118 918 660 HOH HOH . D 4 HOH A 119 919 773 HOH HOH . D 4 HOH A 120 920 762 HOH HOH . D 4 HOH A 121 921 721 HOH HOH . D 4 HOH A 122 922 661 HOH HOH . D 4 HOH A 123 923 744 HOH HOH . D 4 HOH A 124 924 713 HOH HOH . D 4 HOH A 125 925 751 HOH HOH . D 4 HOH A 126 926 715 HOH HOH . D 4 HOH A 127 927 643 HOH HOH . D 4 HOH A 128 928 746 HOH HOH . D 4 HOH A 129 929 709 HOH HOH . D 4 HOH A 130 930 788 HOH HOH . D 4 HOH A 131 931 699 HOH HOH . D 4 HOH A 132 932 652 HOH HOH . D 4 HOH A 133 933 720 HOH HOH . D 4 HOH A 134 934 784 HOH HOH . D 4 HOH A 135 935 795 HOH HOH . D 4 HOH A 136 936 673 HOH HOH . D 4 HOH A 137 937 705 HOH HOH . D 4 HOH A 138 938 776 HOH HOH . D 4 HOH A 139 939 755 HOH HOH . D 4 HOH A 140 940 731 HOH HOH . D 4 HOH A 141 941 690 HOH HOH . D 4 HOH A 142 942 780 HOH HOH . D 4 HOH A 143 943 724 HOH HOH . D 4 HOH A 144 944 749 HOH HOH . D 4 HOH A 145 945 796 HOH HOH . D 4 HOH A 146 946 670 HOH HOH . D 4 HOH A 147 947 741 HOH HOH . D 4 HOH A 148 948 771 HOH HOH . D 4 HOH A 149 949 733 HOH HOH . D 4 HOH A 150 950 764 HOH HOH . D 4 HOH A 151 951 737 HOH HOH . D 4 HOH A 152 952 725 HOH HOH . D 4 HOH A 153 953 786 HOH HOH . D 4 HOH A 154 954 765 HOH HOH . D 4 HOH A 155 955 691 HOH HOH . D 4 HOH A 156 956 783 HOH HOH . D 4 HOH A 157 957 772 HOH HOH . D 4 HOH A 158 958 726 HOH HOH . D 4 HOH A 159 959 759 HOH HOH . D 4 HOH A 160 960 703 HOH HOH . D 4 HOH A 161 961 752 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 -14.194 -1.279 6.62 0.8 33.08 ? C1 CIT 701 A 1 HETATM 2 O O1 CIT . . . B 2 -15.001 -1.924 5.925 0.8 37.59 ? O1 CIT 701 A 1 HETATM 3 O O2 CIT . . . B 2 -12.962 -1.502 6.536 0.8 35.01 ? O2 CIT 701 A 1 HETATM 4 C C2 CIT . . . B 2 -14.766 -0.243 7.547 0.8 30.43 ? C2 CIT 701 A 1 HETATM 5 C C3 CIT . . . B 2 -14.866 1.083 6.806 0.8 39.33 ? C3 CIT 701 A 1 HETATM 6 O O7 CIT . . . B 2 -16.205 1.236 6.295 0.8 46.15 ? O7 CIT 701 A 1 HETATM 7 C C4 CIT . . . B 2 -14.517 2.206 7.775 0.8 36.21 ? C4 CIT 701 A 1 HETATM 8 C C5 CIT . . . B 2 -15.168 3.461 7.274 0.8 39.43 ? C5 CIT 701 A 1 HETATM 9 O O3 CIT . . . B 2 -15.448 3.589 6.06 0.8 38.35 ? O3 CIT 701 A 1 HETATM 10 O O4 CIT . . . B 2 -15.43 4.375 8.07 0.8 32.37 ? O4 CIT 701 A 1 HETATM 11 C C6 CIT . . . B 2 -13.897 1.108 5.645 0.8 50.18 ? C6 CIT 701 A 1 HETATM 12 O O5 CIT . . . B 2 -14.286 0.82 4.473 0.8 54.67 ? O5 CIT 701 A 1 HETATM 13 O O6 CIT . . . B 2 -12.706 1.408 5.862 0.8 54.75 ? O6 CIT 701 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #