data_7V1G # _model_server_result.job_id 88UUWB6jg1q23WRFd98V-Q _model_server_result.datetime_utc '2024-11-01 17:29:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v1g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7V1G # _exptl.entry_id 7V1G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.47 _cell.angle_gamma 90 _cell.entry_id 7V1G _cell.length_a 35.125 _cell.length_b 89.685 _cell.length_c 45.452 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V1G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NH1 ARG 23 A ARG 28 1_555 E P 5GP . A 5GP 304 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.732 ? metalc ? metalc1 A OG SER 145 A SER 150 1_555 B MG MG . A MG 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc2 A OG1 THR 212 A THR 217 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc3 B MG MG . A MG 301 1_555 H O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc4 B MG MG . A MG 301 1_555 H O HOH . A HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc5 B MG MG . A MG 301 1_555 H O HOH . A HOH 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 110 n n C1 O2 CIT sing 111 n n C1 C2 CIT sing 112 n n O2 HO2 CIT sing 113 n n C2 C3 CIT sing 114 n n C2 H21 CIT sing 115 n n C2 H22 CIT sing 116 n n C3 O7 CIT sing 117 n n C3 C4 CIT sing 118 n n C3 C6 CIT sing 119 n n O7 HO7 CIT sing 120 n n C4 C5 CIT sing 121 n n C4 H41 CIT sing 122 n n C4 H42 CIT sing 123 n n C5 O3 CIT doub 124 n n C5 O4 CIT sing 125 n n O4 HO4 CIT sing 126 n n C6 O5 CIT doub 127 n n C6 O6 CIT sing 128 n n O6 HO6 CIT sing 129 n n # _atom_sites.entry_id 7V1G _atom_sites.fract_transf_matrix[1][1] 0.02847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000232 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022002 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 302 MG MG . C 3 CIT A 1 302 601 CIT CIT . D 4 SAM A 1 303 701 SAM SAM . E 5 5GP A 1 304 901 5GP 5GP . F 6 GTP A 1 305 901 GTP GTP . G 7 GOL A 1 306 1001 GOL GOL . H 8 HOH A 1 401 146 HOH HOH . H 8 HOH A 2 402 105 HOH HOH . H 8 HOH A 3 403 266 HOH HOH . H 8 HOH A 4 404 290 HOH HOH . H 8 HOH A 5 405 102 HOH HOH . H 8 HOH A 6 406 275 HOH HOH . H 8 HOH A 7 407 94 HOH HOH . H 8 HOH A 8 408 103 HOH HOH . H 8 HOH A 9 409 269 HOH HOH . H 8 HOH A 10 410 180 HOH HOH . H 8 HOH A 11 411 109 HOH HOH . H 8 HOH A 12 412 121 HOH HOH . H 8 HOH A 13 413 284 HOH HOH . H 8 HOH A 14 414 278 HOH HOH . H 8 HOH A 15 415 154 HOH HOH . H 8 HOH A 16 416 231 HOH HOH . H 8 HOH A 17 417 174 HOH HOH . H 8 HOH A 18 418 84 HOH HOH . H 8 HOH A 19 419 254 HOH HOH . H 8 HOH A 20 420 34 HOH HOH . H 8 HOH A 21 421 138 HOH HOH . H 8 HOH A 22 422 260 HOH HOH . H 8 HOH A 23 423 131 HOH HOH . H 8 HOH A 24 424 198 HOH HOH . H 8 HOH A 25 425 104 HOH HOH . H 8 HOH A 26 426 112 HOH HOH . H 8 HOH A 27 427 100 HOH HOH . H 8 HOH A 28 428 59 HOH HOH . H 8 HOH A 29 429 70 HOH HOH . H 8 HOH A 30 430 10 HOH HOH . H 8 HOH A 31 431 116 HOH HOH . H 8 HOH A 32 432 211 HOH HOH . H 8 HOH A 33 433 120 HOH HOH . H 8 HOH A 34 434 53 HOH HOH . H 8 HOH A 35 435 25 HOH HOH . H 8 HOH A 36 436 73 HOH HOH . H 8 HOH A 37 437 89 HOH HOH . H 8 HOH A 38 438 1 HOH HOH . H 8 HOH A 39 439 6 HOH HOH . H 8 HOH A 40 440 56 HOH HOH . H 8 HOH A 41 441 212 HOH HOH . H 8 HOH A 42 442 244 HOH HOH . H 8 HOH A 43 443 228 HOH HOH . H 8 HOH A 44 444 203 HOH HOH . H 8 HOH A 45 445 60 HOH HOH . H 8 HOH A 46 446 39 HOH HOH . H 8 HOH A 47 447 79 HOH HOH . H 8 HOH A 48 448 35 HOH HOH . H 8 HOH A 49 449 272 HOH HOH . H 8 HOH A 50 450 78 HOH HOH . H 8 HOH A 51 451 67 HOH HOH . H 8 HOH A 52 452 33 HOH HOH . H 8 HOH A 53 453 65 HOH HOH . H 8 HOH A 54 454 93 HOH HOH . H 8 HOH A 55 455 21 HOH HOH . H 8 HOH A 56 456 90 HOH HOH . H 8 HOH A 57 457 50 HOH HOH . H 8 HOH A 58 458 17 HOH HOH . H 8 HOH A 59 459 88 HOH HOH . H 8 HOH A 60 460 98 HOH HOH . H 8 HOH A 61 461 7 HOH HOH . H 8 HOH A 62 462 80 HOH HOH . H 8 HOH A 63 463 92 HOH HOH . H 8 HOH A 64 464 72 HOH HOH . H 8 HOH A 65 465 69 HOH HOH . H 8 HOH A 66 466 71 HOH HOH . H 8 HOH A 67 467 168 HOH HOH . H 8 HOH A 68 468 83 HOH HOH . H 8 HOH A 69 469 62 HOH HOH . H 8 HOH A 70 470 165 HOH HOH . H 8 HOH A 71 471 175 HOH HOH . H 8 HOH A 72 472 44 HOH HOH . H 8 HOH A 73 473 9 HOH HOH . H 8 HOH A 74 474 3 HOH HOH . H 8 HOH A 75 475 87 HOH HOH . H 8 HOH A 76 476 49 HOH HOH . H 8 HOH A 77 477 52 HOH HOH . H 8 HOH A 78 478 24 HOH HOH . H 8 HOH A 79 479 276 HOH HOH . H 8 HOH A 80 480 58 HOH HOH . H 8 HOH A 81 481 158 HOH HOH . H 8 HOH A 82 482 274 HOH HOH . H 8 HOH A 83 483 2 HOH HOH . H 8 HOH A 84 484 145 HOH HOH . H 8 HOH A 85 485 252 HOH HOH . H 8 HOH A 86 486 5 HOH HOH . H 8 HOH A 87 487 107 HOH HOH . H 8 HOH A 88 488 96 HOH HOH . H 8 HOH A 89 489 81 HOH HOH . H 8 HOH A 90 490 190 HOH HOH . H 8 HOH A 91 491 144 HOH HOH . H 8 HOH A 92 492 195 HOH HOH . H 8 HOH A 93 493 8 HOH HOH . H 8 HOH A 94 494 264 HOH HOH . H 8 HOH A 95 495 13 HOH HOH . H 8 HOH A 96 496 86 HOH HOH . H 8 HOH A 97 497 64 HOH HOH . H 8 HOH A 98 498 101 HOH HOH . H 8 HOH A 99 499 265 HOH HOH . H 8 HOH A 100 500 46 HOH HOH . H 8 HOH A 101 501 196 HOH HOH . H 8 HOH A 102 502 77 HOH HOH . H 8 HOH A 103 503 134 HOH HOH . H 8 HOH A 104 504 125 HOH HOH . H 8 HOH A 105 505 123 HOH HOH . H 8 HOH A 106 506 167 HOH HOH . H 8 HOH A 107 507 108 HOH HOH . H 8 HOH A 108 508 12 HOH HOH . H 8 HOH A 109 509 148 HOH HOH . H 8 HOH A 110 510 75 HOH HOH . H 8 HOH A 111 511 20 HOH HOH . H 8 HOH A 112 512 111 HOH HOH . H 8 HOH A 113 513 271 HOH HOH . H 8 HOH A 114 514 122 HOH HOH . H 8 HOH A 115 515 97 HOH HOH . H 8 HOH A 116 516 155 HOH HOH . H 8 HOH A 117 517 55 HOH HOH . H 8 HOH A 118 518 115 HOH HOH . H 8 HOH A 119 519 4 HOH HOH . H 8 HOH A 120 520 149 HOH HOH . H 8 HOH A 121 521 28 HOH HOH . H 8 HOH A 122 522 135 HOH HOH . H 8 HOH A 123 523 184 HOH HOH . H 8 HOH A 124 524 209 HOH HOH . H 8 HOH A 125 525 61 HOH HOH . H 8 HOH A 126 526 187 HOH HOH . H 8 HOH A 127 527 36 HOH HOH . H 8 HOH A 128 528 30 HOH HOH . H 8 HOH A 129 529 37 HOH HOH . H 8 HOH A 130 530 29 HOH HOH . H 8 HOH A 131 531 126 HOH HOH . H 8 HOH A 132 532 54 HOH HOH . H 8 HOH A 133 533 41 HOH HOH . H 8 HOH A 134 534 63 HOH HOH . H 8 HOH A 135 535 201 HOH HOH . H 8 HOH A 136 536 273 HOH HOH . H 8 HOH A 137 537 113 HOH HOH . H 8 HOH A 138 538 200 HOH HOH . H 8 HOH A 139 539 249 HOH HOH . H 8 HOH A 140 540 141 HOH HOH . H 8 HOH A 141 541 199 HOH HOH . H 8 HOH A 142 542 232 HOH HOH . H 8 HOH A 143 543 133 HOH HOH . H 8 HOH A 144 544 26 HOH HOH . H 8 HOH A 145 545 95 HOH HOH . H 8 HOH A 146 546 48 HOH HOH . H 8 HOH A 147 547 235 HOH HOH . H 8 HOH A 148 548 57 HOH HOH . H 8 HOH A 149 549 229 HOH HOH . H 8 HOH A 150 550 85 HOH HOH . H 8 HOH A 151 551 117 HOH HOH . H 8 HOH A 152 552 236 HOH HOH . H 8 HOH A 153 553 194 HOH HOH . H 8 HOH A 154 554 106 HOH HOH . H 8 HOH A 155 555 74 HOH HOH . H 8 HOH A 156 556 171 HOH HOH . H 8 HOH A 157 557 27 HOH HOH . H 8 HOH A 158 558 283 HOH HOH . H 8 HOH A 159 559 18 HOH HOH . H 8 HOH A 160 560 19 HOH HOH . H 8 HOH A 161 561 216 HOH HOH . H 8 HOH A 162 562 150 HOH HOH . H 8 HOH A 163 563 226 HOH HOH . H 8 HOH A 164 564 22 HOH HOH . H 8 HOH A 165 565 173 HOH HOH . H 8 HOH A 166 566 280 HOH HOH . H 8 HOH A 167 567 128 HOH HOH . H 8 HOH A 168 568 47 HOH HOH . H 8 HOH A 169 569 170 HOH HOH . H 8 HOH A 170 570 181 HOH HOH . H 8 HOH A 171 571 267 HOH HOH . H 8 HOH A 172 572 99 HOH HOH . H 8 HOH A 173 573 256 HOH HOH . H 8 HOH A 174 574 118 HOH HOH . H 8 HOH A 175 575 224 HOH HOH . H 8 HOH A 176 576 202 HOH HOH . H 8 HOH A 177 577 197 HOH HOH . H 8 HOH A 178 578 240 HOH HOH . H 8 HOH A 179 579 156 HOH HOH . H 8 HOH A 180 580 217 HOH HOH . H 8 HOH A 181 581 218 HOH HOH . H 8 HOH A 182 582 176 HOH HOH . H 8 HOH A 183 583 129 HOH HOH . H 8 HOH A 184 584 15 HOH HOH . H 8 HOH A 185 585 110 HOH HOH . H 8 HOH A 186 586 279 HOH HOH . H 8 HOH A 187 587 153 HOH HOH . H 8 HOH A 188 588 281 HOH HOH . H 8 HOH A 189 589 263 HOH HOH . H 8 HOH A 190 590 66 HOH HOH . H 8 HOH A 191 591 262 HOH HOH . H 8 HOH A 192 592 247 HOH HOH . H 8 HOH A 193 593 242 HOH HOH . H 8 HOH A 194 594 253 HOH HOH . H 8 HOH A 195 595 172 HOH HOH . H 8 HOH A 196 596 261 HOH HOH . H 8 HOH A 197 597 119 HOH HOH . H 8 HOH A 198 598 130 HOH HOH . H 8 HOH A 199 599 206 HOH HOH . H 8 HOH A 200 600 186 HOH HOH . H 8 HOH A 201 601 76 HOH HOH . H 8 HOH A 202 602 287 HOH HOH . H 8 HOH A 203 603 157 HOH HOH . H 8 HOH A 204 604 268 HOH HOH . H 8 HOH A 205 605 161 HOH HOH . H 8 HOH A 206 606 255 HOH HOH . H 8 HOH A 207 607 230 HOH HOH . H 8 HOH A 208 608 243 HOH HOH . H 8 HOH A 209 609 288 HOH HOH . H 8 HOH A 210 610 282 HOH HOH . H 8 HOH A 211 611 239 HOH HOH . H 8 HOH A 212 612 258 HOH HOH . H 8 HOH A 213 613 227 HOH HOH . H 8 HOH A 214 614 151 HOH HOH . H 8 HOH A 215 615 286 HOH HOH . H 8 HOH A 216 616 142 HOH HOH . H 8 HOH A 217 617 136 HOH HOH . H 8 HOH A 218 618 91 HOH HOH . H 8 HOH A 219 619 220 HOH HOH . H 8 HOH A 220 620 213 HOH HOH . H 8 HOH A 221 621 193 HOH HOH . H 8 HOH A 222 622 178 HOH HOH . H 8 HOH A 223 623 250 HOH HOH . H 8 HOH A 224 624 159 HOH HOH . H 8 HOH A 225 625 245 HOH HOH . H 8 HOH A 226 626 285 HOH HOH . H 8 HOH A 227 627 219 HOH HOH . H 8 HOH A 228 628 160 HOH HOH . H 8 HOH A 229 629 140 HOH HOH . H 8 HOH A 230 630 207 HOH HOH . H 8 HOH A 231 631 277 HOH HOH . H 8 HOH A 232 632 147 HOH HOH . H 8 HOH A 233 633 248 HOH HOH . H 8 HOH A 234 634 179 HOH HOH . H 8 HOH A 235 635 191 HOH HOH . H 8 HOH A 236 636 124 HOH HOH . H 8 HOH A 237 637 270 HOH HOH . H 8 HOH A 238 638 163 HOH HOH . H 8 HOH A 239 639 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 -0.544 -32.953 -1.96 1 25.55 ? C1 CIT 302 A 1 HETATM 2 O O1 CIT . . . C 3 0.069 -31.94 -2.37 1 25.48 ? O1 CIT 302 A 1 HETATM 3 O O2 CIT . . . C 3 -1.776 -32.865 -1.738 1 24.67 ? O2 CIT 302 A 1 HETATM 4 C C2 CIT . . . C 3 0.172 -34.266 -1.703 1 31.81 ? C2 CIT 302 A 1 HETATM 5 C C3 CIT . . . C 3 1.661 -34.218 -2.062 1 36.22 ? C3 CIT 302 A 1 HETATM 6 O O7 CIT . . . C 3 2.205 -35.557 -1.939 1 43.6 ? O7 CIT 302 A 1 HETATM 7 C C4 CIT . . . C 3 2.442 -33.25 -1.168 1 40.03 ? C4 CIT 302 A 1 HETATM 8 C C5 CIT . . . C 3 3.269 -33.963 -0.129 1 46.06 ? C5 CIT 302 A 1 HETATM 9 O O3 CIT . . . C 3 4.477 -34.203 -0.358 1 47.14 ? O3 CIT 302 A 1 HETATM 10 O O4 CIT . . . C 3 2.766 -34.301 0.969 1 48.3 ? O4 CIT 302 A 1 HETATM 11 C C6 CIT . . . C 3 1.846 -33.754 -3.498 1 38.56 ? C6 CIT 302 A 1 HETATM 12 O O5 CIT . . . C 3 0.996 -34.011 -4.379 1 45.81 ? O5 CIT 302 A 1 HETATM 13 O O6 CIT . . . C 3 2.851 -33.073 -3.794 1 38.24 ? O6 CIT 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #