data_7V1H # _model_server_result.job_id UqU5kwoavdtL6rbzZhsxyA _model_server_result.datetime_utc '2024-11-01 21:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7V1H # _exptl.entry_id 7V1H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.09 _cell.angle_gamma 90 _cell.entry_id 7V1H _cell.length_a 35.09 _cell.length_b 91.092 _cell.length_c 45.397 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O2A MGP . A MGP 401 1_555 G MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc2 B O2B MGP . A MGP 401 1_555 G MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc3 G MG MG . A MG 406 1_555 H O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc4 G MG MG . A MG 406 1_555 H O HOH . A HOH 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 7V1H _atom_sites.fract_transf_matrix[1][1] 0.028498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00054 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022032 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MGP A 1 401 401 MGP MGP . C 3 GOL A 1 402 501 GOL GOL . D 4 CIT A 1 403 601 CIT CIT . E 5 SAM A 1 404 701 SAM SAM . F 6 PEG A 1 405 801 PEG PEG . G 7 MG A 1 406 1 MG MG . H 8 HOH A 1 501 191 HOH HOH . H 8 HOH A 2 502 135 HOH HOH . H 8 HOH A 3 503 228 HOH HOH . H 8 HOH A 4 504 229 HOH HOH . H 8 HOH A 5 505 99 HOH HOH . H 8 HOH A 6 506 30 HOH HOH . H 8 HOH A 7 507 56 HOH HOH . H 8 HOH A 8 508 193 HOH HOH . H 8 HOH A 9 509 91 HOH HOH . H 8 HOH A 10 510 194 HOH HOH . H 8 HOH A 11 511 39 HOH HOH . H 8 HOH A 12 512 77 HOH HOH . H 8 HOH A 13 513 58 HOH HOH . H 8 HOH A 14 514 63 HOH HOH . H 8 HOH A 15 515 67 HOH HOH . H 8 HOH A 16 516 129 HOH HOH . H 8 HOH A 17 517 44 HOH HOH . H 8 HOH A 18 518 217 HOH HOH . H 8 HOH A 19 519 7 HOH HOH . H 8 HOH A 20 520 131 HOH HOH . H 8 HOH A 21 521 243 HOH HOH . H 8 HOH A 22 522 13 HOH HOH . H 8 HOH A 23 523 76 HOH HOH . H 8 HOH A 24 524 37 HOH HOH . H 8 HOH A 25 525 5 HOH HOH . H 8 HOH A 26 526 6 HOH HOH . H 8 HOH A 27 527 112 HOH HOH . H 8 HOH A 28 528 29 HOH HOH . H 8 HOH A 29 529 23 HOH HOH . H 8 HOH A 30 530 16 HOH HOH . H 8 HOH A 31 531 18 HOH HOH . H 8 HOH A 32 532 107 HOH HOH . H 8 HOH A 33 533 130 HOH HOH . H 8 HOH A 34 534 100 HOH HOH . H 8 HOH A 35 535 11 HOH HOH . H 8 HOH A 36 536 4 HOH HOH . H 8 HOH A 37 537 177 HOH HOH . H 8 HOH A 38 538 45 HOH HOH . H 8 HOH A 39 539 82 HOH HOH . H 8 HOH A 40 540 139 HOH HOH . H 8 HOH A 41 541 35 HOH HOH . H 8 HOH A 42 542 232 HOH HOH . H 8 HOH A 43 543 42 HOH HOH . H 8 HOH A 44 544 93 HOH HOH . H 8 HOH A 45 545 186 HOH HOH . H 8 HOH A 46 546 176 HOH HOH . H 8 HOH A 47 547 52 HOH HOH . H 8 HOH A 48 548 132 HOH HOH . H 8 HOH A 49 549 9 HOH HOH . H 8 HOH A 50 550 28 HOH HOH . H 8 HOH A 51 551 83 HOH HOH . H 8 HOH A 52 552 70 HOH HOH . H 8 HOH A 53 553 94 HOH HOH . H 8 HOH A 54 554 88 HOH HOH . H 8 HOH A 55 555 119 HOH HOH . H 8 HOH A 56 556 81 HOH HOH . H 8 HOH A 57 557 108 HOH HOH . H 8 HOH A 58 558 98 HOH HOH . H 8 HOH A 59 559 128 HOH HOH . H 8 HOH A 60 560 85 HOH HOH . H 8 HOH A 61 561 244 HOH HOH . H 8 HOH A 62 562 115 HOH HOH . H 8 HOH A 63 563 226 HOH HOH . H 8 HOH A 64 564 64 HOH HOH . H 8 HOH A 65 565 120 HOH HOH . H 8 HOH A 66 566 8 HOH HOH . H 8 HOH A 67 567 105 HOH HOH . H 8 HOH A 68 568 62 HOH HOH . H 8 HOH A 69 569 89 HOH HOH . H 8 HOH A 70 570 147 HOH HOH . H 8 HOH A 71 571 148 HOH HOH . H 8 HOH A 72 572 10 HOH HOH . H 8 HOH A 73 573 122 HOH HOH . H 8 HOH A 74 574 206 HOH HOH . H 8 HOH A 75 575 49 HOH HOH . H 8 HOH A 76 576 47 HOH HOH . H 8 HOH A 77 577 74 HOH HOH . H 8 HOH A 78 578 48 HOH HOH . H 8 HOH A 79 579 114 HOH HOH . H 8 HOH A 80 580 123 HOH HOH . H 8 HOH A 81 581 78 HOH HOH . H 8 HOH A 82 582 118 HOH HOH . H 8 HOH A 83 583 40 HOH HOH . H 8 HOH A 84 584 192 HOH HOH . H 8 HOH A 85 585 140 HOH HOH . H 8 HOH A 86 586 169 HOH HOH . H 8 HOH A 87 587 57 HOH HOH . H 8 HOH A 88 588 53 HOH HOH . H 8 HOH A 89 589 150 HOH HOH . H 8 HOH A 90 590 183 HOH HOH . H 8 HOH A 91 591 90 HOH HOH . H 8 HOH A 92 592 50 HOH HOH . H 8 HOH A 93 593 168 HOH HOH . H 8 HOH A 94 594 173 HOH HOH . H 8 HOH A 95 595 143 HOH HOH . H 8 HOH A 96 596 71 HOH HOH . H 8 HOH A 97 597 116 HOH HOH . H 8 HOH A 98 598 189 HOH HOH . H 8 HOH A 99 599 55 HOH HOH . H 8 HOH A 100 600 207 HOH HOH . H 8 HOH A 101 601 27 HOH HOH . H 8 HOH A 102 602 222 HOH HOH . H 8 HOH A 103 603 211 HOH HOH . H 8 HOH A 104 604 73 HOH HOH . H 8 HOH A 105 605 185 HOH HOH . H 8 HOH A 106 606 103 HOH HOH . H 8 HOH A 107 607 86 HOH HOH . H 8 HOH A 108 608 66 HOH HOH . H 8 HOH A 109 609 26 HOH HOH . H 8 HOH A 110 610 242 HOH HOH . H 8 HOH A 111 611 213 HOH HOH . H 8 HOH A 112 612 15 HOH HOH . H 8 HOH A 113 613 246 HOH HOH . H 8 HOH A 114 614 61 HOH HOH . H 8 HOH A 115 615 225 HOH HOH . H 8 HOH A 116 616 54 HOH HOH . H 8 HOH A 117 617 240 HOH HOH . H 8 HOH A 118 618 126 HOH HOH . H 8 HOH A 119 619 20 HOH HOH . H 8 HOH A 120 620 121 HOH HOH . H 8 HOH A 121 621 197 HOH HOH . H 8 HOH A 122 622 32 HOH HOH . H 8 HOH A 123 623 215 HOH HOH . H 8 HOH A 124 624 92 HOH HOH . H 8 HOH A 125 625 181 HOH HOH . H 8 HOH A 126 626 113 HOH HOH . H 8 HOH A 127 627 209 HOH HOH . H 8 HOH A 128 628 60 HOH HOH . H 8 HOH A 129 629 43 HOH HOH . H 8 HOH A 130 630 101 HOH HOH . H 8 HOH A 131 631 236 HOH HOH . H 8 HOH A 132 632 210 HOH HOH . H 8 HOH A 133 633 104 HOH HOH . H 8 HOH A 134 634 51 HOH HOH . H 8 HOH A 135 635 175 HOH HOH . H 8 HOH A 136 636 79 HOH HOH . H 8 HOH A 137 637 184 HOH HOH . H 8 HOH A 138 638 182 HOH HOH . H 8 HOH A 139 639 96 HOH HOH . H 8 HOH A 140 640 155 HOH HOH . H 8 HOH A 141 641 80 HOH HOH . H 8 HOH A 142 642 153 HOH HOH . H 8 HOH A 143 643 34 HOH HOH . H 8 HOH A 144 644 124 HOH HOH . H 8 HOH A 145 645 219 HOH HOH . H 8 HOH A 146 646 97 HOH HOH . H 8 HOH A 147 647 152 HOH HOH . H 8 HOH A 148 648 72 HOH HOH . H 8 HOH A 149 649 134 HOH HOH . H 8 HOH A 150 650 157 HOH HOH . H 8 HOH A 151 651 149 HOH HOH . H 8 HOH A 152 652 106 HOH HOH . H 8 HOH A 153 653 238 HOH HOH . H 8 HOH A 154 654 200 HOH HOH . H 8 HOH A 155 655 38 HOH HOH . H 8 HOH A 156 656 234 HOH HOH . H 8 HOH A 157 657 233 HOH HOH . H 8 HOH A 158 658 75 HOH HOH . H 8 HOH A 159 659 227 HOH HOH . H 8 HOH A 160 660 196 HOH HOH . H 8 HOH A 161 661 198 HOH HOH . H 8 HOH A 162 662 110 HOH HOH . H 8 HOH A 163 663 36 HOH HOH . H 8 HOH A 164 664 188 HOH HOH . H 8 HOH A 165 665 231 HOH HOH . H 8 HOH A 166 666 241 HOH HOH . H 8 HOH A 167 667 174 HOH HOH . H 8 HOH A 168 668 172 HOH HOH . H 8 HOH A 169 669 255 HOH HOH . H 8 HOH A 170 670 154 HOH HOH . H 8 HOH A 171 671 102 HOH HOH . H 8 HOH A 172 672 117 HOH HOH . H 8 HOH A 173 673 220 HOH HOH . H 8 HOH A 174 674 166 HOH HOH . H 8 HOH A 175 675 224 HOH HOH . H 8 HOH A 176 676 256 HOH HOH . H 8 HOH A 177 677 125 HOH HOH . H 8 HOH A 178 678 216 HOH HOH . H 8 HOH A 179 679 239 HOH HOH . H 8 HOH A 180 680 208 HOH HOH . H 8 HOH A 181 681 221 HOH HOH . H 8 HOH A 182 682 127 HOH HOH . H 8 HOH A 183 683 247 HOH HOH . H 8 HOH A 184 684 142 HOH HOH . H 8 HOH A 185 685 1 HOH HOH . H 8 HOH A 186 686 201 HOH HOH . H 8 HOH A 187 687 144 HOH HOH . H 8 HOH A 188 688 69 HOH HOH . H 8 HOH A 189 689 251 HOH HOH . H 8 HOH A 190 690 214 HOH HOH . H 8 HOH A 191 691 218 HOH HOH . H 8 HOH A 192 692 87 HOH HOH . H 8 HOH A 193 693 137 HOH HOH . H 8 HOH A 194 694 254 HOH HOH . H 8 HOH A 195 695 109 HOH HOH . H 8 HOH A 196 696 250 HOH HOH . H 8 HOH A 197 697 146 HOH HOH . H 8 HOH A 198 698 205 HOH HOH . H 8 HOH A 199 699 212 HOH HOH . H 8 HOH A 200 700 230 HOH HOH . H 8 HOH A 201 701 180 HOH HOH . H 8 HOH A 202 702 199 HOH HOH . H 8 HOH A 203 703 235 HOH HOH . H 8 HOH A 204 704 141 HOH HOH . H 8 HOH A 205 705 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . D 4 17.351 -32.064 -1.594 1 48.22 ? C1 CIT 403 A 1 HETATM 2 O O1 CIT . . . D 4 18.087 -31.089 -1.86 1 40.59 ? O1 CIT 403 A 1 HETATM 3 O O2 CIT . . . D 4 16.115 -31.874 -1.541 1 47.75 ? O2 CIT 403 A 1 HETATM 4 C C2 CIT . . . D 4 17.905 -33.447 -1.312 1 45.19 ? C2 CIT 403 A 1 HETATM 5 C C3 CIT . . . D 4 19.285 -33.739 -1.905 1 43.81 ? C3 CIT 403 A 1 HETATM 6 O O7 CIT . . . D 4 20.265 -33.113 -1.037 1 38.46 ? O7 CIT 403 A 1 HETATM 7 C C4 CIT . . . D 4 19.491 -35.25 -2.015 1 43 ? C4 CIT 403 A 1 HETATM 8 C C5 CIT . . . D 4 20.939 -35.653 -2.191 1 46.95 ? C5 CIT 403 A 1 HETATM 9 O O3 CIT . . . D 4 21.83 -34.801 -2.413 1 33.81 ? O3 CIT 403 A 1 HETATM 10 O O4 CIT . . . D 4 21.266 -36.86 -2.112 1 45.23 ? O4 CIT 403 A 1 HETATM 11 C C6 CIT . . . D 4 19.431 -33.149 -3.294 1 33.76 ? C6 CIT 403 A 1 HETATM 12 O O5 CIT . . . D 4 18.674 -33.52 -4.213 1 44.16 ? O5 CIT 403 A 1 HETATM 13 O O6 CIT . . . D 4 20.301 -32.277 -3.514 1 26.1 ? O6 CIT 403 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #