data_7V1O # _model_server_result.job_id pU_HDpLAsnUHfhN3coHo5g _model_server_result.datetime_utc '2024-10-18 15:27:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v1o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 7V1O # _exptl.entry_id 7V1O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 143.185 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description naphthalen-1-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7V1O _cell.length_a 116.44 _cell.length_b 116.44 _cell.length_c 203.31 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V1O _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C10 H9 N' _chem_comp.formula_weight 143.185 _chem_comp.id 5I2 _chem_comp.mon_nstd_flag . _chem_comp.name naphthalen-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 C06 5I2 doub 1 n y C09 C08 5I2 sing 2 n y C06 C03 5I2 sing 3 n y C08 C04 5I2 doub 4 n y C03 C07 5I2 sing 5 n y C03 C02 5I2 doub 6 n y C04 C02 5I2 sing 7 n y C04 N01 5I2 sing 8 n n C07 C11 5I2 doub 9 n y C02 C05 5I2 sing 10 n y C11 C10 5I2 sing 11 n y C05 C10 5I2 doub 12 n y C05 H1 5I2 sing 13 n n C06 H2 5I2 sing 14 n n C07 H3 5I2 sing 15 n n C08 H4 5I2 sing 16 n n C09 H5 5I2 sing 17 n n C10 H6 5I2 sing 18 n n C11 H7 5I2 sing 19 n n N01 H8 5I2 sing 20 n n N01 H9 5I2 sing 21 n n # _atom_sites.entry_id 7V1O _atom_sites.fract_transf_matrix[1][1] 0.008588 _atom_sites.fract_transf_matrix[1][2] 0.004958 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5I2 A 1 401 401 5I2 1NA . D 3 A3P A 1 402 501 A3P A3P . E 2 5I2 B 1 401 401 5I2 1NA . F 3 A3P B 1 402 501 A3P A3P . G 4 HOH A 1 501 6 HOH HOH . G 4 HOH A 2 502 19 HOH HOH . G 4 HOH A 3 503 13 HOH HOH . G 4 HOH A 4 504 28 HOH HOH . G 4 HOH A 5 505 31 HOH HOH . G 4 HOH A 6 506 36 HOH HOH . G 4 HOH A 7 507 4 HOH HOH . G 4 HOH A 8 508 90 HOH HOH . G 4 HOH A 9 509 68 HOH HOH . G 4 HOH A 10 510 34 HOH HOH . G 4 HOH A 11 511 50 HOH HOH . G 4 HOH A 12 512 52 HOH HOH . G 4 HOH A 13 513 72 HOH HOH . G 4 HOH A 14 514 54 HOH HOH . G 4 HOH A 15 515 17 HOH HOH . G 4 HOH A 16 516 81 HOH HOH . G 4 HOH A 17 517 1 HOH HOH . G 4 HOH A 18 518 56 HOH HOH . G 4 HOH A 19 519 7 HOH HOH . G 4 HOH A 20 520 73 HOH HOH . G 4 HOH A 21 521 40 HOH HOH . G 4 HOH A 22 522 76 HOH HOH . G 4 HOH A 23 523 9 HOH HOH . G 4 HOH A 24 524 57 HOH HOH . G 4 HOH A 25 525 55 HOH HOH . G 4 HOH A 26 526 53 HOH HOH . G 4 HOH A 27 527 74 HOH HOH . G 4 HOH A 28 528 67 HOH HOH . G 4 HOH A 29 529 29 HOH HOH . G 4 HOH A 30 530 78 HOH HOH . G 4 HOH A 31 531 41 HOH HOH . G 4 HOH A 32 532 10 HOH HOH . G 4 HOH A 33 533 47 HOH HOH . G 4 HOH A 34 534 71 HOH HOH . G 4 HOH A 35 535 5 HOH HOH . G 4 HOH A 36 536 87 HOH HOH . G 4 HOH A 37 537 79 HOH HOH . G 4 HOH A 38 538 3 HOH HOH . G 4 HOH A 39 539 83 HOH HOH . G 4 HOH A 40 540 15 HOH HOH . G 4 HOH A 41 541 11 HOH HOH . G 4 HOH A 42 542 16 HOH HOH . G 4 HOH A 43 543 26 HOH HOH . G 4 HOH A 44 544 8 HOH HOH . G 4 HOH A 45 545 58 HOH HOH . G 4 HOH A 46 546 22 HOH HOH . G 4 HOH A 47 547 49 HOH HOH . G 4 HOH A 48 548 82 HOH HOH . G 4 HOH A 49 549 84 HOH HOH . G 4 HOH A 50 550 48 HOH HOH . G 4 HOH A 51 551 12 HOH HOH . H 4 HOH B 1 501 2 HOH HOH . H 4 HOH B 2 502 65 HOH HOH . H 4 HOH B 3 503 64 HOH HOH . H 4 HOH B 4 504 70 HOH HOH . H 4 HOH B 5 505 85 HOH HOH . H 4 HOH B 6 506 25 HOH HOH . H 4 HOH B 7 507 66 HOH HOH . H 4 HOH B 8 508 80 HOH HOH . H 4 HOH B 9 509 69 HOH HOH . H 4 HOH B 10 510 62 HOH HOH . H 4 HOH B 11 511 60 HOH HOH . H 4 HOH B 12 512 61 HOH HOH . H 4 HOH B 13 513 35 HOH HOH . H 4 HOH B 14 514 18 HOH HOH . H 4 HOH B 15 515 75 HOH HOH . H 4 HOH B 16 516 14 HOH HOH . H 4 HOH B 17 517 77 HOH HOH . H 4 HOH B 18 518 86 HOH HOH . H 4 HOH B 19 519 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 5I2 . . . E 2 -40.167 13.597 15.376 1 77.72 ? C02 5I2 401 B 1 HETATM 2 C C03 5I2 . . . E 2 -40.818 12.582 16.058 1 82.87 ? C03 5I2 401 B 1 HETATM 3 C C04 5I2 . . . E 2 -39.585 14.642 16.073 1 76.18 ? C04 5I2 401 B 1 HETATM 4 C C05 5I2 . . . E 2 -40.096 13.569 13.994 1 76.43 ? C05 5I2 401 B 1 HETATM 5 C C06 5I2 . . . E 2 -40.888 12.615 17.443 1 84.9 ? C06 5I2 401 B 1 HETATM 6 C C07 5I2 . . . E 2 -41.4 11.537 15.356 1 73.99 ? C07 5I2 401 B 1 HETATM 7 C C08 5I2 . . . E 2 -39.655 14.676 17.458 1 81.22 ? C08 5I2 401 B 1 HETATM 8 C C09 5I2 . . . E 2 -40.306 13.662 18.144 1 81.81 ? C09 5I2 401 B 1 HETATM 9 C C10 5I2 . . . E 2 -40.676 12.525 13.292 1 68.15 ? C10 5I2 401 B 1 HETATM 10 C C11 5I2 . . . E 2 -41.328 11.509 13.972 1 66.36 ? C11 5I2 401 B 1 HETATM 11 N N01 5I2 . . . E 2 -38.904 15.7 15.352 1 79.67 ? N01 5I2 401 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 11 #