data_7V38 # _model_server_result.job_id 72BA233CWat0PcsNPZaSRw _model_server_result.datetime_utc '2024-11-08 06:52:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 7V38 # _exptl.entry_id 7V38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.757 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PARA-MERCURY-BENZENESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7V38 _cell.length_a 50.227 _cell.length_b 74.012 _cell.length_c 140.807 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 79 A GLU 399 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc2 A SG CYS 89 A CYS 409 1_555 D HG PMB . A PMB 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc3 A SG CYS 186 A CYS 506 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc4 A NE2 HIS 189 A HIS 509 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc5 A SG CYS 209 A CYS 529 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc6 B OE2 GLU 79 B GLU 399 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc7 B SG CYS 89 B CYS 409 1_555 F HG PMB . B PMB 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc8 B SG CYS 186 B CYS 506 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc9 B NE2 HIS 189 B HIS 509 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc10 B SG CYS 209 B CYS 529 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? # _chem_comp.formula 'C6 H5 Hg O3 S' _chem_comp.formula_weight 357.757 _chem_comp.id PMB _chem_comp.mon_nstd_flag . _chem_comp.name 'PARA-MERCURY-BENZENESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PMB doub 260 n y C1 C6 PMB sing 261 n y C1 S1 PMB sing 262 n n C2 C3 PMB sing 263 n y C2 H2 PMB sing 264 n n C3 C4 PMB doub 265 n y C3 H3 PMB sing 266 n n C4 C5 PMB sing 267 n y C4 HG PMB sing 268 n n C5 C6 PMB doub 269 n y C5 H5 PMB sing 270 n n C6 H6 PMB sing 271 n n S1 O1 PMB doub 272 n n S1 O2 PMB doub 273 n n S1 O3 PMB sing 274 n n O3 HO3 PMB sing 275 n n # _atom_sites.entry_id 7V38 _atom_sites.fract_transf_matrix[1][1] 0.01991 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007102 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 PMB A 1 602 602 PMB PMB . E 2 ZN B 1 601 601 ZN ZN . F 3 PMB B 1 602 602 PMB PMB . G 4 HOH A 1 701 701 HOH HOH . G 4 HOH A 2 702 702 HOH HOH . G 4 HOH A 3 703 703 HOH HOH . G 4 HOH A 4 704 704 HOH HOH . G 4 HOH A 5 705 705 HOH HOH . G 4 HOH A 6 706 706 HOH HOH . G 4 HOH A 7 707 707 HOH HOH . G 4 HOH A 8 708 708 HOH HOH . G 4 HOH A 9 709 709 HOH HOH . G 4 HOH A 10 710 710 HOH HOH . G 4 HOH A 11 711 711 HOH HOH . G 4 HOH A 12 712 712 HOH HOH . G 4 HOH A 13 713 713 HOH HOH . G 4 HOH A 14 714 714 HOH HOH . G 4 HOH A 15 715 715 HOH HOH . G 4 HOH A 16 716 716 HOH HOH . H 4 HOH B 1 701 701 HOH HOH . H 4 HOH B 2 702 702 HOH HOH . H 4 HOH B 3 703 703 HOH HOH . H 4 HOH B 4 704 704 HOH HOH . H 4 HOH B 5 705 705 HOH HOH . H 4 HOH B 6 706 706 HOH HOH . H 4 HOH B 7 707 707 HOH HOH . H 4 HOH B 8 708 708 HOH HOH . H 4 HOH B 9 709 709 HOH HOH . H 4 HOH B 10 710 710 HOH HOH . H 4 HOH B 11 711 711 HOH HOH . H 4 HOH B 12 712 712 HOH HOH . H 4 HOH B 13 713 713 HOH HOH . H 4 HOH B 14 714 714 HOH HOH . H 4 HOH B 15 715 715 HOH HOH . H 4 HOH B 16 716 716 HOH HOH . H 4 HOH B 17 717 717 HOH HOH . H 4 HOH B 18 718 718 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PMB . . . F 3 92.934 65.807 18.335 1 137.96 ? C1 PMB 602 B 1 HETATM 2 C C2 PMB . . . F 3 92.033 66.715 18.865 1 134.62 ? C2 PMB 602 B 1 HETATM 3 C C3 PMB . . . F 3 91.391 67.62 18.035 1 134.57 ? C3 PMB 602 B 1 HETATM 4 C C4 PMB . . . F 3 91.647 67.615 16.673 1 137.29 ? C4 PMB 602 B 1 HETATM 5 C C5 PMB . . . F 3 92.549 66.704 16.142 1 139.21 ? C5 PMB 602 B 1 HETATM 6 C C6 PMB . . . F 3 93.193 65.8 16.973 1 139.07 ? C6 PMB 602 B 1 HETATM 7 S S1 PMB . . . F 3 93.753 64.656 19.405 1 138.35 ? S1 PMB 602 B 1 HETATM 8 O O1 PMB . . . F 3 94.604 63.706 18.595 1 138.78 ? O1 PMB 602 B 1 HETATM 9 O O2 PMB . . . F 3 92.758 63.912 20.264 1 136.49 ? O2 PMB 602 B 1 HETATM 10 O O3 PMB . . . F 3 94.569 65.375 20.453 1 135.07 ? O3 PMB 602 B 1 HETATM 11 HG HG PMB . . . F 3 90.574 69.122 15.291 1 206.91 ? HG PMB 602 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #