data_7V3C # _model_server_result.job_id XGr7MTAMBQix54B7-eZtYw _model_server_result.datetime_utc '2024-11-08 04:34:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 7V3C # _exptl.entry_id 7V3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 338.711 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(HYDROXYMERCURY)BENZOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7V3C _cell.length_a 123.851 _cell.length_b 58.809 _cell.length_c 68.845 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 69 A ASP 389 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc2 A OE2 GLU 79 A GLU 399 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc3 A SG CYS 186 A CYS 506 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc4 A NE2 HIS 189 A HIS 509 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc5 A SG CYS 209 A CYS 529 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc6 A OD2 ASP 213 A ASP 533 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc7 D MG MG . A MG 602 1_555 H O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc8 D MG MG . A MG 602 1_555 H O HOH . A HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc9 D MG MG . A MG 602 1_555 H O HOH . A HOH 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc10 D MG MG . A MG 602 1_555 H O HOH . A HOH 764 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc11 B OD2 ASP 69 B ASP 389 1_555 G MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc12 B OE1 GLU 79 B GLU 399 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc13 B SG CYS 141 B CYS 461 1_555 F HG HGB . B HGB 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc14 B O SER 144 B SER 464 1_555 F HG HGB . B HGB 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc15 B OD1 ASP 163 B ASP 483 1_555 F HG HGB . B HGB 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc16 B SG CYS 186 B CYS 506 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc17 B NE2 HIS 189 B HIS 509 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc18 B SG CYS 209 B CYS 529 1_555 E ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc19 B OD2 ASP 213 B ASP 533 1_555 G MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc20 F HG HGB . B HGB 602 1_555 I O HOH . B HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.085 ? metalc ? metalc21 G MG MG . B MG 603 1_555 I O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc22 G MG MG . B MG 603 1_555 I O HOH . B HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.857 ? metalc ? metalc23 G MG MG . B MG 603 1_555 I O HOH . B HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc24 G MG MG . B MG 603 1_555 I O HOH . B HOH 768 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'C7 H6 Hg O3' _chem_comp.formula_weight 338.711 _chem_comp.id HGB _chem_comp.mon_nstd_flag . _chem_comp.name '4-(HYDROXYMERCURY)BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HGB sing 129 n n C1 O2 HGB doub 130 n n C1 C2 HGB sing 131 n n C3 C5 HGB doub 132 n y C3 C2 HGB sing 133 n y C3 HC3 HGB sing 134 n n C5 C7 HGB sing 135 n y C5 HC5 HGB sing 136 n n C7 HG HGB sing 137 n n C7 C6 HGB doub 138 n y HG O3 HGB sing 139 n n C6 C4 HGB sing 140 n y C6 HC6 HGB sing 141 n n C4 C2 HGB doub 142 n y C4 HC4 HGB sing 143 n n O1 HO11 HGB sing 144 n n O3 HO31 HGB sing 145 n n # _atom_sites.entry_id 7V3C _atom_sites.fract_transf_matrix[1][1] 0.008074 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017004 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 3 MG A 1 602 602 MG MG . E 2 ZN B 1 601 601 ZN ZN . F 4 HGB B 1 602 602 HGB HGB . G 3 MG B 1 603 603 MG MG . H 5 HOH A 1 701 701 HOH HOH . H 5 HOH A 2 702 702 HOH HOH . H 5 HOH A 3 703 703 HOH HOH . H 5 HOH A 4 704 704 HOH HOH . H 5 HOH A 5 705 705 HOH HOH . H 5 HOH A 6 706 706 HOH HOH . H 5 HOH A 7 707 707 HOH HOH . H 5 HOH A 8 708 708 HOH HOH . H 5 HOH A 9 709 709 HOH HOH . H 5 HOH A 10 710 710 HOH HOH . H 5 HOH A 11 711 711 HOH HOH . H 5 HOH A 12 712 712 HOH HOH . H 5 HOH A 13 713 713 HOH HOH . H 5 HOH A 14 714 714 HOH HOH . H 5 HOH A 15 715 715 HOH HOH . H 5 HOH A 16 716 716 HOH HOH . H 5 HOH A 17 717 717 HOH HOH . H 5 HOH A 18 718 718 HOH HOH . H 5 HOH A 19 719 719 HOH HOH . H 5 HOH A 20 720 720 HOH HOH . H 5 HOH A 21 721 721 HOH HOH . H 5 HOH A 22 722 722 HOH HOH . H 5 HOH A 23 723 723 HOH HOH . H 5 HOH A 24 724 724 HOH HOH . H 5 HOH A 25 725 725 HOH HOH . H 5 HOH A 26 726 726 HOH HOH . H 5 HOH A 27 727 727 HOH HOH . H 5 HOH A 28 728 728 HOH HOH . H 5 HOH A 29 729 729 HOH HOH . H 5 HOH A 30 730 730 HOH HOH . H 5 HOH A 31 731 731 HOH HOH . H 5 HOH A 32 732 732 HOH HOH . H 5 HOH A 33 733 733 HOH HOH . H 5 HOH A 34 734 734 HOH HOH . H 5 HOH A 35 735 735 HOH HOH . H 5 HOH A 36 736 736 HOH HOH . H 5 HOH A 37 737 737 HOH HOH . H 5 HOH A 38 738 738 HOH HOH . H 5 HOH A 39 739 739 HOH HOH . H 5 HOH A 40 740 740 HOH HOH . H 5 HOH A 41 741 741 HOH HOH . H 5 HOH A 42 742 742 HOH HOH . H 5 HOH A 43 743 743 HOH HOH . H 5 HOH A 44 744 744 HOH HOH . H 5 HOH A 45 745 745 HOH HOH . H 5 HOH A 46 746 746 HOH HOH . H 5 HOH A 47 747 747 HOH HOH . H 5 HOH A 48 748 748 HOH HOH . H 5 HOH A 49 749 749 HOH HOH . H 5 HOH A 50 750 750 HOH HOH . H 5 HOH A 51 751 751 HOH HOH . H 5 HOH A 52 752 752 HOH HOH . H 5 HOH A 53 753 753 HOH HOH . H 5 HOH A 54 754 754 HOH HOH . H 5 HOH A 55 755 755 HOH HOH . H 5 HOH A 56 756 756 HOH HOH . H 5 HOH A 57 757 757 HOH HOH . H 5 HOH A 58 758 758 HOH HOH . H 5 HOH A 59 759 759 HOH HOH . H 5 HOH A 60 760 760 HOH HOH . H 5 HOH A 61 761 761 HOH HOH . H 5 HOH A 62 762 762 HOH HOH . H 5 HOH A 63 763 763 HOH HOH . H 5 HOH A 64 764 764 HOH HOH . H 5 HOH A 65 765 765 HOH HOH . H 5 HOH A 66 766 766 HOH HOH . H 5 HOH A 67 767 767 HOH HOH . H 5 HOH A 68 768 768 HOH HOH . H 5 HOH A 69 769 769 HOH HOH . H 5 HOH A 70 770 770 HOH HOH . H 5 HOH A 71 771 771 HOH HOH . H 5 HOH A 72 772 772 HOH HOH . H 5 HOH A 73 773 773 HOH HOH . H 5 HOH A 74 774 774 HOH HOH . H 5 HOH A 75 775 775 HOH HOH . H 5 HOH A 76 776 776 HOH HOH . H 5 HOH A 77 777 777 HOH HOH . H 5 HOH A 78 778 778 HOH HOH . H 5 HOH A 79 779 779 HOH HOH . H 5 HOH A 80 780 780 HOH HOH . H 5 HOH A 81 781 781 HOH HOH . H 5 HOH A 82 782 782 HOH HOH . H 5 HOH A 83 783 783 HOH HOH . H 5 HOH A 84 784 784 HOH HOH . H 5 HOH A 85 785 785 HOH HOH . H 5 HOH A 86 786 786 HOH HOH . H 5 HOH A 87 787 787 HOH HOH . H 5 HOH A 88 788 788 HOH HOH . H 5 HOH A 89 789 789 HOH HOH . H 5 HOH A 90 790 790 HOH HOH . H 5 HOH A 91 791 791 HOH HOH . H 5 HOH A 92 792 792 HOH HOH . H 5 HOH A 93 793 793 HOH HOH . H 5 HOH A 94 794 794 HOH HOH . H 5 HOH A 95 795 795 HOH HOH . H 5 HOH A 96 796 796 HOH HOH . H 5 HOH A 97 797 797 HOH HOH . H 5 HOH A 98 798 798 HOH HOH . H 5 HOH A 99 799 799 HOH HOH . H 5 HOH A 100 800 800 HOH HOH . H 5 HOH A 101 801 801 HOH HOH . H 5 HOH A 102 802 802 HOH HOH . H 5 HOH A 103 803 803 HOH HOH . I 5 HOH B 1 701 701 HOH HOH . I 5 HOH B 2 702 702 HOH HOH . I 5 HOH B 3 703 703 HOH HOH . I 5 HOH B 4 704 704 HOH HOH . I 5 HOH B 5 705 705 HOH HOH . I 5 HOH B 6 706 706 HOH HOH . I 5 HOH B 7 707 707 HOH HOH . I 5 HOH B 8 708 708 HOH HOH . I 5 HOH B 9 709 709 HOH HOH . I 5 HOH B 10 710 710 HOH HOH . I 5 HOH B 11 711 711 HOH HOH . I 5 HOH B 12 712 712 HOH HOH . I 5 HOH B 13 713 713 HOH HOH . I 5 HOH B 14 714 714 HOH HOH . I 5 HOH B 15 715 715 HOH HOH . I 5 HOH B 16 716 716 HOH HOH . I 5 HOH B 17 717 717 HOH HOH . I 5 HOH B 18 718 718 HOH HOH . I 5 HOH B 19 719 719 HOH HOH . I 5 HOH B 20 720 720 HOH HOH . I 5 HOH B 21 721 721 HOH HOH . I 5 HOH B 22 722 722 HOH HOH . I 5 HOH B 23 723 723 HOH HOH . I 5 HOH B 24 724 724 HOH HOH . I 5 HOH B 25 725 725 HOH HOH . I 5 HOH B 26 726 726 HOH HOH . I 5 HOH B 27 727 727 HOH HOH . I 5 HOH B 28 728 728 HOH HOH . I 5 HOH B 29 729 729 HOH HOH . I 5 HOH B 30 730 730 HOH HOH . I 5 HOH B 31 731 731 HOH HOH . I 5 HOH B 32 732 732 HOH HOH . I 5 HOH B 33 733 733 HOH HOH . I 5 HOH B 34 734 734 HOH HOH . I 5 HOH B 35 735 735 HOH HOH . I 5 HOH B 36 736 736 HOH HOH . I 5 HOH B 37 737 737 HOH HOH . I 5 HOH B 38 738 738 HOH HOH . I 5 HOH B 39 739 739 HOH HOH . I 5 HOH B 40 740 740 HOH HOH . I 5 HOH B 41 741 741 HOH HOH . I 5 HOH B 42 742 742 HOH HOH . I 5 HOH B 43 743 743 HOH HOH . I 5 HOH B 44 744 744 HOH HOH . I 5 HOH B 45 745 745 HOH HOH . I 5 HOH B 46 746 746 HOH HOH . I 5 HOH B 47 747 747 HOH HOH . I 5 HOH B 48 748 748 HOH HOH . I 5 HOH B 49 749 749 HOH HOH . I 5 HOH B 50 750 750 HOH HOH . I 5 HOH B 51 751 751 HOH HOH . I 5 HOH B 52 752 752 HOH HOH . I 5 HOH B 53 753 753 HOH HOH . I 5 HOH B 54 754 754 HOH HOH . I 5 HOH B 55 755 755 HOH HOH . I 5 HOH B 56 756 756 HOH HOH . I 5 HOH B 57 757 757 HOH HOH . I 5 HOH B 58 758 758 HOH HOH . I 5 HOH B 59 759 759 HOH HOH . I 5 HOH B 60 760 760 HOH HOH . I 5 HOH B 61 761 761 HOH HOH . I 5 HOH B 62 762 762 HOH HOH . I 5 HOH B 63 763 763 HOH HOH . I 5 HOH B 64 764 764 HOH HOH . I 5 HOH B 65 765 765 HOH HOH . I 5 HOH B 66 766 766 HOH HOH . I 5 HOH B 67 767 767 HOH HOH . I 5 HOH B 68 768 768 HOH HOH . I 5 HOH B 69 769 769 HOH HOH . I 5 HOH B 70 770 770 HOH HOH . I 5 HOH B 71 771 771 HOH HOH . I 5 HOH B 72 772 772 HOH HOH . I 5 HOH B 73 773 773 HOH HOH . I 5 HOH B 74 774 774 HOH HOH . I 5 HOH B 75 775 775 HOH HOH . I 5 HOH B 76 776 776 HOH HOH . I 5 HOH B 77 777 777 HOH HOH . I 5 HOH B 78 778 778 HOH HOH . I 5 HOH B 79 779 779 HOH HOH . I 5 HOH B 80 780 780 HOH HOH . I 5 HOH B 81 781 781 HOH HOH . I 5 HOH B 82 782 782 HOH HOH . I 5 HOH B 83 783 783 HOH HOH . I 5 HOH B 84 784 784 HOH HOH . I 5 HOH B 85 785 785 HOH HOH . I 5 HOH B 86 786 786 HOH HOH . I 5 HOH B 87 787 787 HOH HOH . I 5 HOH B 88 788 788 HOH HOH . I 5 HOH B 89 789 789 HOH HOH . I 5 HOH B 90 790 790 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HGB . . . F 4 63.719 24.821 -18.074 0.47 42.16 ? C1 HGB 602 B 1 HETATM 2 C C3 HGB . . . F 4 63.93 26.462 -16.249 0.47 40.08 ? C3 HGB 602 B 1 HETATM 3 C C5 HGB . . . F 4 63.578 27.614 -15.595 0.47 36.09 ? C5 HGB 602 B 1 HETATM 4 C C7 HGB . . . F 4 62.549 28.333 -16.166 0.47 37.63 ? C7 HGB 602 B 1 HETATM 5 HG HG HGB . . . F 4 61.879 30.346 -15.168 0.47 42.47 ? HG HGB 602 B 1 HETATM 6 C C6 HGB . . . F 4 61.887 27.97 -17.314 0.47 38.87 ? C6 HGB 602 B 1 HETATM 7 C C4 HGB . . . F 4 62.256 26.823 -17.965 0.47 40.58 ? C4 HGB 602 B 1 HETATM 8 O O1 HGB . . . F 4 64.944 24.569 -18.086 0.47 44.27 ? O1 HGB 602 B 1 HETATM 9 O O2 HGB . . . F 4 62.884 24.07 -18.605 0.47 44.36 ? O2 HGB 602 B 1 HETATM 10 C C2 HGB . . . F 4 63.269 26.083 -17.401 0.47 40.8 ? C2 HGB 602 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 10 #