data_7V3Z # _model_server_result.job_id AALv1t4lV0Kf49SrRxMc1w _model_server_result.datetime_utc '2024-11-15 15:41:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 7V3Z # _exptl.entry_id 7V3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7V3Z _cell.length_a 65.81 _cell.length_b 75.35 _cell.length_c 138.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 159 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 257 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 166 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 264 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.098 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 228 n n N1 C10 FMN doub 229 n n C2 O2 FMN doub 230 n n C2 N3 FMN sing 231 n n N3 C4 FMN sing 232 n n N3 HN3 FMN sing 233 n n C4 O4 FMN doub 234 n n C4 C4A FMN sing 235 n n C4A N5 FMN doub 236 n n C4A C10 FMN sing 237 n n N5 C5A FMN sing 238 n n C5A C6 FMN doub 239 n y C5A C9A FMN sing 240 n y C6 C7 FMN sing 241 n y C6 H6 FMN sing 242 n n C7 C7M FMN sing 243 n n C7 C8 FMN doub 244 n y C7M HM71 FMN sing 245 n n C7M HM72 FMN sing 246 n n C7M HM73 FMN sing 247 n n C8 C8M FMN sing 248 n n C8 C9 FMN sing 249 n y C8M HM81 FMN sing 250 n n C8M HM82 FMN sing 251 n n C8M HM83 FMN sing 252 n n C9 C9A FMN doub 253 n y C9 H9 FMN sing 254 n n C9A N10 FMN sing 255 n n N10 C10 FMN sing 256 n n N10 C1' FMN sing 257 n n C1' C2' FMN sing 258 n n C1' "H1'1" FMN sing 259 n n C1' "H1'2" FMN sing 260 n n C2' O2' FMN sing 261 n n C2' C3' FMN sing 262 n n C2' H2' FMN sing 263 n n O2' HO2' FMN sing 264 n n C3' O3' FMN sing 265 n n C3' C4' FMN sing 266 n n C3' H3' FMN sing 267 n n O3' HO3' FMN sing 268 n n C4' O4' FMN sing 269 n n C4' C5' FMN sing 270 n n C4' H4' FMN sing 271 n n O4' HO4' FMN sing 272 n n C5' O5' FMN sing 273 n n C5' "H5'1" FMN sing 274 n n C5' "H5'2" FMN sing 275 n n O5' P FMN sing 276 n n P O1P FMN doub 277 n n P O2P FMN sing 278 n n P O3P FMN sing 279 n n O2P HOP2 FMN sing 280 n n O3P HOP3 FMN sing 281 n n # _atom_sites.entry_id 7V3Z _atom_sites.fract_transf_matrix[1][1] 0.015195 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9GF A 1 1201 1201 9GF 9GF . C 3 CLR A 1 1202 1301 CLR CLR . D 4 FMN A 1 1203 1401 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . D 4 -40.55 -107.816 247.275 1 131.49 ? N1 FMN 1203 A 1 HETATM 2 C C2 FMN . . . D 4 -41.427 -107.091 248.014 1 131.65 ? C2 FMN 1203 A 1 HETATM 3 O O2 FMN . . . D 4 -41.07 -106.689 249.143 1 131.69 ? O2 FMN 1203 A 1 HETATM 4 N N3 FMN . . . D 4 -42.664 -106.786 247.582 1 131.48 ? N3 FMN 1203 A 1 HETATM 5 C C4 FMN . . . D 4 -43.121 -107.179 246.387 1 131.1 ? C4 FMN 1203 A 1 HETATM 6 O O4 FMN . . . D 4 -44.276 -106.879 246.014 1 129.33 ? O4 FMN 1203 A 1 HETATM 7 C C4A FMN . . . D 4 -42.224 -107.977 245.515 1 132.05 ? C4A FMN 1203 A 1 HETATM 8 N N5 FMN . . . D 4 -42.608 -108.412 244.294 1 132.31 ? N5 FMN 1203 A 1 HETATM 9 C C5A FMN . . . D 4 -41.766 -109.139 243.523 1 130.78 ? C5A FMN 1203 A 1 HETATM 10 C C6 FMN . . . D 4 -42.181 -109.577 242.271 1 129.54 ? C6 FMN 1203 A 1 HETATM 11 C C7 FMN . . . D 4 -41.322 -110.324 241.473 1 128.79 ? C7 FMN 1203 A 1 HETATM 12 C C7M FMN . . . D 4 -41.775 -110.797 240.117 1 128.11 ? C7M FMN 1203 A 1 HETATM 13 C C8 FMN . . . D 4 -39.956 -110.657 241.956 1 130 ? C8 FMN 1203 A 1 HETATM 14 C C8M FMN . . . D 4 -39.026 -111.467 241.091 1 131.06 ? C8M FMN 1203 A 1 HETATM 15 C C9 FMN . . . D 4 -39.537 -110.222 243.208 1 129.93 ? C9 FMN 1203 A 1 HETATM 16 C C9A FMN . . . D 4 -40.395 -109.475 244.005 1 130.28 ? C9A FMN 1203 A 1 HETATM 17 N N10 FMN . . . D 4 -39.977 -109.03 245.274 1 130.89 ? N10 FMN 1203 A 1 HETATM 18 C C10 FMN . . . D 4 -40.877 -108.277 246.05 1 131.58 ? C10 FMN 1203 A 1 HETATM 19 C C1' FMN . . . D 4 -38.637 -109.344 245.775 1 131.34 ? C1' FMN 1203 A 1 HETATM 20 C C2' FMN . . . D 4 -38.609 -110.782 246.279 1 132.16 ? C2' FMN 1203 A 1 HETATM 21 O O2' FMN . . . D 4 -39.165 -110.834 247.598 1 132.89 ? O2' FMN 1203 A 1 HETATM 22 C C3' FMN . . . D 4 -37.185 -111.325 246.301 1 132.25 ? C3' FMN 1203 A 1 HETATM 23 O O3' FMN . . . D 4 -36.899 -111.962 245.051 1 130.34 ? O3' FMN 1203 A 1 HETATM 24 C C4' FMN . . . D 4 -36.993 -112.325 247.435 1 134.4 ? C4' FMN 1203 A 1 HETATM 25 O O4' FMN . . . D 4 -35.65 -112.242 247.922 1 134.23 ? O4' FMN 1203 A 1 HETATM 26 C C5' FMN . . . D 4 -37.276 -113.746 246.963 1 137.39 ? C5' FMN 1203 A 1 HETATM 27 O O5' FMN . . . D 4 -37.245 -114.632 248.08 1 139.3 ? O5' FMN 1203 A 1 HETATM 28 P P FMN . . . D 4 -37.651 -116.18 247.905 1 140.23 ? P FMN 1203 A 1 HETATM 29 O O1P FMN . . . D 4 -38.907 -116.134 247.068 1 139.51 ? O1P FMN 1203 A 1 HETATM 30 O O2P FMN . . . D 4 -37.861 -116.663 249.32 1 140.31 -1 O2P FMN 1203 A 1 HETATM 31 O O3P FMN . . . D 4 -36.459 -116.791 247.208 1 140.06 -1 O3P FMN 1203 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #