data_7V8K # _model_server_result.job_id 8rG4QGTvBd4lTrWWTTLzsg _model_server_result.datetime_utc '2024-11-22 08:15:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7v8k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":909}' # _entry.id 7V8K # _exptl.entry_id 7V8K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.94 _cell.angle_gamma 90 _cell.entry_id 7V8K _cell.length_a 77.196 _cell.length_b 81.673 _cell.length_c 104.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7V8K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7V8K _atom_sites.fract_transf_matrix[1][1] 0.012954 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002976 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012244 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PRO A 1 901 901 PRO PRO . D 3 EDO A 1 902 902 EDO EDO . E 3 EDO A 1 903 903 EDO EDO . F 3 EDO A 1 904 904 EDO EDO . G 3 EDO A 1 905 905 EDO EDO . H 3 EDO A 1 906 906 EDO EDO . I 3 EDO A 1 907 907 EDO EDO . J 3 EDO A 1 908 908 EDO EDO . K 4 IMD A 1 909 909 IMD IMD . L 5 CL A 1 910 910 CL CL . M 5 CL A 1 911 911 CL CL . N 2 PRO B 1 901 901 PRO PRO . O 3 EDO B 1 902 902 EDO EDO . P 3 EDO B 1 903 903 EDO EDO . Q 3 EDO B 1 904 904 EDO EDO . R 3 EDO B 1 905 905 EDO EDO . S 3 EDO B 1 906 906 EDO EDO . T 3 EDO B 1 907 907 EDO EDO . U 3 EDO B 1 908 908 EDO EDO . V 3 EDO B 1 909 909 EDO EDO . W 3 EDO B 1 910 911 EDO EDO . X 5 CL B 1 911 912 CL CL . Y 6 HOH A 1 1001 88 HOH HOH . Y 6 HOH A 2 1002 96 HOH HOH . Y 6 HOH A 3 1003 130 HOH HOH . Y 6 HOH A 4 1004 180 HOH HOH . Y 6 HOH A 5 1005 134 HOH HOH . Y 6 HOH A 6 1006 49 HOH HOH . Y 6 HOH A 7 1007 169 HOH HOH . Y 6 HOH A 8 1008 67 HOH HOH . Y 6 HOH A 9 1009 5 HOH HOH . Y 6 HOH A 10 1010 101 HOH HOH . Y 6 HOH A 11 1011 133 HOH HOH . Y 6 HOH A 12 1012 19 HOH HOH . Y 6 HOH A 13 1013 132 HOH HOH . Y 6 HOH A 14 1014 4 HOH HOH . Y 6 HOH A 15 1015 7 HOH HOH . Y 6 HOH A 16 1016 179 HOH HOH . Y 6 HOH A 17 1017 8 HOH HOH . Y 6 HOH A 18 1018 156 HOH HOH . Y 6 HOH A 19 1019 78 HOH HOH . Y 6 HOH A 20 1020 57 HOH HOH . Y 6 HOH A 21 1021 24 HOH HOH . Y 6 HOH A 22 1022 10 HOH HOH . Y 6 HOH A 23 1023 17 HOH HOH . Y 6 HOH A 24 1024 27 HOH HOH . Y 6 HOH A 25 1025 138 HOH HOH . Y 6 HOH A 26 1026 157 HOH HOH . Y 6 HOH A 27 1027 131 HOH HOH . Y 6 HOH A 28 1028 135 HOH HOH . Y 6 HOH A 29 1029 170 HOH HOH . Y 6 HOH A 30 1030 11 HOH HOH . Y 6 HOH A 31 1031 40 HOH HOH . Y 6 HOH A 32 1032 62 HOH HOH . Y 6 HOH A 33 1033 2 HOH HOH . Y 6 HOH A 34 1034 129 HOH HOH . Y 6 HOH A 35 1035 136 HOH HOH . Y 6 HOH A 36 1036 1 HOH HOH . Y 6 HOH A 37 1037 9 HOH HOH . Y 6 HOH A 38 1038 143 HOH HOH . Y 6 HOH A 39 1039 160 HOH HOH . Y 6 HOH A 40 1040 188 HOH HOH . Y 6 HOH A 41 1041 109 HOH HOH . Y 6 HOH A 42 1042 12 HOH HOH . Y 6 HOH A 43 1043 173 HOH HOH . Y 6 HOH A 44 1044 51 HOH HOH . Y 6 HOH A 45 1045 3 HOH HOH . Y 6 HOH A 46 1046 100 HOH HOH . Y 6 HOH A 47 1047 29 HOH HOH . Y 6 HOH A 48 1048 142 HOH HOH . Y 6 HOH A 49 1049 125 HOH HOH . Y 6 HOH A 50 1050 105 HOH HOH . Y 6 HOH A 51 1051 23 HOH HOH . Y 6 HOH A 52 1052 92 HOH HOH . Y 6 HOH A 53 1053 128 HOH HOH . Y 6 HOH A 54 1054 161 HOH HOH . Y 6 HOH A 55 1055 18 HOH HOH . Y 6 HOH A 56 1056 114 HOH HOH . Y 6 HOH A 57 1057 15 HOH HOH . Y 6 HOH A 58 1058 28 HOH HOH . Y 6 HOH A 59 1059 45 HOH HOH . Y 6 HOH A 60 1060 21 HOH HOH . Y 6 HOH A 61 1061 48 HOH HOH . Y 6 HOH A 62 1062 110 HOH HOH . Y 6 HOH A 63 1063 186 HOH HOH . Y 6 HOH A 64 1064 74 HOH HOH . Y 6 HOH A 65 1065 43 HOH HOH . Y 6 HOH A 66 1066 159 HOH HOH . Y 6 HOH A 67 1067 112 HOH HOH . Y 6 HOH A 68 1068 184 HOH HOH . Y 6 HOH A 69 1069 93 HOH HOH . Y 6 HOH A 70 1070 73 HOH HOH . Y 6 HOH A 71 1071 76 HOH HOH . Y 6 HOH A 72 1072 120 HOH HOH . Y 6 HOH A 73 1073 158 HOH HOH . Y 6 HOH A 74 1074 31 HOH HOH . Y 6 HOH A 75 1075 137 HOH HOH . Y 6 HOH A 76 1076 30 HOH HOH . Y 6 HOH A 77 1077 66 HOH HOH . Y 6 HOH A 78 1078 166 HOH HOH . Y 6 HOH A 79 1079 33 HOH HOH . Y 6 HOH A 80 1080 85 HOH HOH . Y 6 HOH A 81 1081 174 HOH HOH . Y 6 HOH A 82 1082 94 HOH HOH . Y 6 HOH A 83 1083 107 HOH HOH . Y 6 HOH A 84 1084 70 HOH HOH . Y 6 HOH A 85 1085 165 HOH HOH . Y 6 HOH A 86 1086 187 HOH HOH . Y 6 HOH A 87 1087 154 HOH HOH . Y 6 HOH A 88 1088 182 HOH HOH . Y 6 HOH A 89 1089 177 HOH HOH . Y 6 HOH A 90 1090 63 HOH HOH . Y 6 HOH A 91 1091 121 HOH HOH . Y 6 HOH A 92 1092 168 HOH HOH . Y 6 HOH A 93 1093 163 HOH HOH . Y 6 HOH A 94 1094 90 HOH HOH . Y 6 HOH A 95 1095 139 HOH HOH . Y 6 HOH A 96 1096 176 HOH HOH . Y 6 HOH A 97 1097 178 HOH HOH . Y 6 HOH A 98 1098 155 HOH HOH . Y 6 HOH A 99 1099 60 HOH HOH . Y 6 HOH A 100 1100 152 HOH HOH . Y 6 HOH A 101 1101 82 HOH HOH . Y 6 HOH A 102 1102 64 HOH HOH . Y 6 HOH A 103 1103 83 HOH HOH . Y 6 HOH A 104 1104 126 HOH HOH . Y 6 HOH A 105 1105 102 HOH HOH . Y 6 HOH A 106 1106 53 HOH HOH . Z 6 HOH B 1 1001 111 HOH HOH . Z 6 HOH B 2 1002 145 HOH HOH . Z 6 HOH B 3 1003 13 HOH HOH . Z 6 HOH B 4 1004 32 HOH HOH . Z 6 HOH B 5 1005 25 HOH HOH . Z 6 HOH B 6 1006 38 HOH HOH . Z 6 HOH B 7 1007 69 HOH HOH . Z 6 HOH B 8 1008 79 HOH HOH . Z 6 HOH B 9 1009 146 HOH HOH . Z 6 HOH B 10 1010 41 HOH HOH . Z 6 HOH B 11 1011 99 HOH HOH . Z 6 HOH B 12 1012 141 HOH HOH . Z 6 HOH B 13 1013 181 HOH HOH . Z 6 HOH B 14 1014 89 HOH HOH . Z 6 HOH B 15 1015 95 HOH HOH . Z 6 HOH B 16 1016 65 HOH HOH . Z 6 HOH B 17 1017 39 HOH HOH . Z 6 HOH B 18 1018 123 HOH HOH . Z 6 HOH B 19 1019 84 HOH HOH . Z 6 HOH B 20 1020 86 HOH HOH . Z 6 HOH B 21 1021 117 HOH HOH . Z 6 HOH B 22 1022 6 HOH HOH . Z 6 HOH B 23 1023 22 HOH HOH . Z 6 HOH B 24 1024 71 HOH HOH . Z 6 HOH B 25 1025 153 HOH HOH . Z 6 HOH B 26 1026 119 HOH HOH . Z 6 HOH B 27 1027 81 HOH HOH . Z 6 HOH B 28 1028 59 HOH HOH . Z 6 HOH B 29 1029 37 HOH HOH . Z 6 HOH B 30 1030 108 HOH HOH . Z 6 HOH B 31 1031 14 HOH HOH . Z 6 HOH B 32 1032 97 HOH HOH . Z 6 HOH B 33 1033 148 HOH HOH . Z 6 HOH B 34 1034 16 HOH HOH . Z 6 HOH B 35 1035 77 HOH HOH . Z 6 HOH B 36 1036 36 HOH HOH . Z 6 HOH B 37 1037 98 HOH HOH . Z 6 HOH B 38 1038 50 HOH HOH . Z 6 HOH B 39 1039 144 HOH HOH . Z 6 HOH B 40 1040 47 HOH HOH . Z 6 HOH B 41 1041 26 HOH HOH . Z 6 HOH B 42 1042 171 HOH HOH . Z 6 HOH B 43 1043 75 HOH HOH . Z 6 HOH B 44 1044 87 HOH HOH . Z 6 HOH B 45 1045 61 HOH HOH . Z 6 HOH B 46 1046 46 HOH HOH . Z 6 HOH B 47 1047 151 HOH HOH . Z 6 HOH B 48 1048 72 HOH HOH . Z 6 HOH B 49 1049 127 HOH HOH . Z 6 HOH B 50 1050 34 HOH HOH . Z 6 HOH B 51 1051 55 HOH HOH . Z 6 HOH B 52 1052 162 HOH HOH . Z 6 HOH B 53 1053 118 HOH HOH . Z 6 HOH B 54 1054 42 HOH HOH . Z 6 HOH B 55 1055 167 HOH HOH . Z 6 HOH B 56 1056 44 HOH HOH . Z 6 HOH B 57 1057 106 HOH HOH . Z 6 HOH B 58 1058 104 HOH HOH . Z 6 HOH B 59 1059 52 HOH HOH . Z 6 HOH B 60 1060 54 HOH HOH . Z 6 HOH B 61 1061 164 HOH HOH . Z 6 HOH B 62 1062 35 HOH HOH . Z 6 HOH B 63 1063 58 HOH HOH . Z 6 HOH B 64 1064 20 HOH HOH . Z 6 HOH B 65 1065 122 HOH HOH . Z 6 HOH B 66 1066 80 HOH HOH . Z 6 HOH B 67 1067 185 HOH HOH . Z 6 HOH B 68 1068 56 HOH HOH . Z 6 HOH B 69 1069 115 HOH HOH . Z 6 HOH B 70 1070 103 HOH HOH . Z 6 HOH B 71 1071 183 HOH HOH . Z 6 HOH B 72 1072 68 HOH HOH . Z 6 HOH B 73 1073 147 HOH HOH . Z 6 HOH B 74 1074 140 HOH HOH . Z 6 HOH B 75 1075 124 HOH HOH . Z 6 HOH B 76 1076 116 HOH HOH . Z 6 HOH B 77 1077 113 HOH HOH . Z 6 HOH B 78 1078 91 HOH HOH . Z 6 HOH B 79 1079 175 HOH HOH . Z 6 HOH B 80 1080 149 HOH HOH . Z 6 HOH B 81 1081 172 HOH HOH . Z 6 HOH B 82 1082 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . V 3 -4.692 -25.548 -0.337 1 58.55 ? C1 EDO 909 B 1 HETATM 2 O O1 EDO . . . V 3 -5.261 -24.346 0.211 1 62.97 ? O1 EDO 909 B 1 HETATM 3 C C2 EDO . . . V 3 -5.527 -25.985 -1.538 1 54.4 ? C2 EDO 909 B 1 HETATM 4 O O2 EDO . . . V 3 -5.149 -25.207 -2.679 1 52.64 ? O2 EDO 909 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 203 _model_server_stats.query_time_ms 619 _model_server_stats.encode_time_ms 51 _model_server_stats.element_count 4 #