data_7VB1 # _model_server_result.job_id ockPHPgwlD5NP0MXwLJtLw _model_server_result.datetime_utc '2024-11-24 03:49:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7VB1 # _exptl.entry_id 7VB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7VB1 _cell.length_a 54.511 _cell.length_b 69.365 _cell.length_c 33.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 237 n n O1 H1 P6G sing 238 n n C2 C3 P6G sing 239 n n C2 H21 P6G sing 240 n n C2 H22 P6G sing 241 n n C3 O4 P6G sing 242 n n C3 H31 P6G sing 243 n n C3 H32 P6G sing 244 n n O4 C5 P6G sing 245 n n C5 C6 P6G sing 246 n n C5 H51 P6G sing 247 n n C5 H52 P6G sing 248 n n C6 O7 P6G sing 249 n n C6 H61 P6G sing 250 n n C6 H62 P6G sing 251 n n O7 C8 P6G sing 252 n n C8 C9 P6G sing 253 n n C8 H81 P6G sing 254 n n C8 H82 P6G sing 255 n n C9 O10 P6G sing 256 n n C9 H91 P6G sing 257 n n C9 H92 P6G sing 258 n n O10 C11 P6G sing 259 n n C11 C12 P6G sing 260 n n C11 H111 P6G sing 261 n n C11 H112 P6G sing 262 n n C12 O13 P6G sing 263 n n C12 H121 P6G sing 264 n n C12 H122 P6G sing 265 n n O13 C14 P6G sing 266 n n C14 C15 P6G sing 267 n n C14 H141 P6G sing 268 n n C14 H142 P6G sing 269 n n C15 O16 P6G sing 270 n n C15 H151 P6G sing 271 n n C15 H152 P6G sing 272 n n O16 C17 P6G sing 273 n n C17 C18 P6G sing 274 n n C17 H171 P6G sing 275 n n C17 H172 P6G sing 276 n n C18 O19 P6G sing 277 n n C18 H181 P6G sing 278 n n C18 H182 P6G sing 279 n n O19 H19 P6G sing 280 n n # _atom_sites.entry_id 7VB1 _atom_sites.fract_transf_matrix[1][1] 0.018345 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029895 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VCA A 1 200 200 VCA VAT . C 3 P6G A 1 201 201 P6G P6G . D 3 P6G A 1 202 202 P6G P6G . E 4 HOH A 1 301 27 HOH HOH . E 4 HOH A 2 302 1139 HOH HOH . E 4 HOH A 3 303 13 HOH HOH . E 4 HOH A 4 304 1064 HOH HOH . E 4 HOH A 5 305 1053 HOH HOH . E 4 HOH A 6 306 25 HOH HOH . E 4 HOH A 7 307 1148 HOH HOH . E 4 HOH A 8 308 1055 HOH HOH . E 4 HOH A 9 309 1023 HOH HOH . E 4 HOH A 10 310 1099 HOH HOH . E 4 HOH A 11 311 20 HOH HOH . E 4 HOH A 12 312 1039 HOH HOH . E 4 HOH A 13 313 1035 HOH HOH . E 4 HOH A 14 314 1059 HOH HOH . E 4 HOH A 15 315 1029 HOH HOH . E 4 HOH A 16 316 7 HOH HOH . E 4 HOH A 17 317 1118 HOH HOH . E 4 HOH A 18 318 1074 HOH HOH . E 4 HOH A 19 319 1126 HOH HOH . E 4 HOH A 20 320 1011 HOH HOH . E 4 HOH A 21 321 1086 HOH HOH . E 4 HOH A 22 322 1006 HOH HOH . E 4 HOH A 23 323 1101 HOH HOH . E 4 HOH A 24 324 12 HOH HOH . E 4 HOH A 25 325 1014 HOH HOH . E 4 HOH A 26 326 1031 HOH HOH . E 4 HOH A 27 327 1121 HOH HOH . E 4 HOH A 28 328 1089 HOH HOH . E 4 HOH A 29 329 1061 HOH HOH . E 4 HOH A 30 330 1085 HOH HOH . E 4 HOH A 31 331 1083 HOH HOH . E 4 HOH A 32 332 1026 HOH HOH . E 4 HOH A 33 333 1012 HOH HOH . E 4 HOH A 34 334 4 HOH HOH . E 4 HOH A 35 335 1008 HOH HOH . E 4 HOH A 36 336 1117 HOH HOH . E 4 HOH A 37 337 1057 HOH HOH . E 4 HOH A 38 338 1073 HOH HOH . E 4 HOH A 39 339 1115 HOH HOH . E 4 HOH A 40 340 1102 HOH HOH . E 4 HOH A 41 341 1020 HOH HOH . E 4 HOH A 42 342 1114 HOH HOH . E 4 HOH A 43 343 1164 HOH HOH . E 4 HOH A 44 344 1087 HOH HOH . E 4 HOH A 45 345 1124 HOH HOH . E 4 HOH A 46 346 1160 HOH HOH . E 4 HOH A 47 347 1052 HOH HOH . E 4 HOH A 48 348 1172 HOH HOH . E 4 HOH A 49 349 1138 HOH HOH . E 4 HOH A 50 350 1091 HOH HOH . E 4 HOH A 51 351 1015 HOH HOH . E 4 HOH A 52 352 1125 HOH HOH . E 4 HOH A 53 353 1081 HOH HOH . E 4 HOH A 54 354 1094 HOH HOH . E 4 HOH A 55 355 1021 HOH HOH . E 4 HOH A 56 356 1032 HOH HOH . E 4 HOH A 57 357 1016 HOH HOH . E 4 HOH A 58 358 1048 HOH HOH . E 4 HOH A 59 359 1122 HOH HOH . E 4 HOH A 60 360 1007 HOH HOH . E 4 HOH A 61 361 1080 HOH HOH . E 4 HOH A 62 362 1170 HOH HOH . E 4 HOH A 63 363 1017 HOH HOH . E 4 HOH A 64 364 1106 HOH HOH . E 4 HOH A 65 365 1040 HOH HOH . E 4 HOH A 66 366 1075 HOH HOH . E 4 HOH A 67 367 1018 HOH HOH . E 4 HOH A 68 368 1050 HOH HOH . E 4 HOH A 69 369 1107 HOH HOH . E 4 HOH A 70 370 1104 HOH HOH . E 4 HOH A 71 371 1022 HOH HOH . E 4 HOH A 72 372 1077 HOH HOH . E 4 HOH A 73 373 1065 HOH HOH . E 4 HOH A 74 374 1036 HOH HOH . E 4 HOH A 75 375 1034 HOH HOH . E 4 HOH A 76 376 1142 HOH HOH . E 4 HOH A 77 377 1028 HOH HOH . E 4 HOH A 78 378 1174 HOH HOH . E 4 HOH A 79 379 3 HOH HOH . E 4 HOH A 80 380 1042 HOH HOH . E 4 HOH A 81 381 1090 HOH HOH . E 4 HOH A 82 382 1079 HOH HOH . E 4 HOH A 83 383 1112 HOH HOH . E 4 HOH A 84 384 1069 HOH HOH . E 4 HOH A 85 385 1116 HOH HOH . E 4 HOH A 86 386 1068 HOH HOH . E 4 HOH A 87 387 1 HOH HOH . E 4 HOH A 88 388 1001 HOH HOH . E 4 HOH A 89 389 1082 HOH HOH . E 4 HOH A 90 390 22 HOH HOH . E 4 HOH A 91 391 14 HOH HOH . E 4 HOH A 92 392 1098 HOH HOH . E 4 HOH A 93 393 1103 HOH HOH . E 4 HOH A 94 394 1105 HOH HOH . E 4 HOH A 95 395 1095 HOH HOH . E 4 HOH A 96 396 6 HOH HOH . E 4 HOH A 97 397 1113 HOH HOH . E 4 HOH A 98 398 21 HOH HOH . E 4 HOH A 99 399 1070 HOH HOH . E 4 HOH A 100 400 1060 HOH HOH . E 4 HOH A 101 401 1047 HOH HOH . E 4 HOH A 102 402 1119 HOH HOH . E 4 HOH A 103 403 1168 HOH HOH . E 4 HOH A 104 404 1049 HOH HOH . E 4 HOH A 105 405 1045 HOH HOH . E 4 HOH A 106 406 1110 HOH HOH . E 4 HOH A 107 407 1171 HOH HOH . E 4 HOH A 108 408 1072 HOH HOH . E 4 HOH A 109 409 1147 HOH HOH . E 4 HOH A 110 410 1056 HOH HOH . E 4 HOH A 111 411 1076 HOH HOH . E 4 HOH A 112 412 1027 HOH HOH . E 4 HOH A 113 413 1071 HOH HOH . E 4 HOH A 114 414 1140 HOH HOH . E 4 HOH A 115 415 1019 HOH HOH . E 4 HOH A 116 416 1111 HOH HOH . E 4 HOH A 117 417 1084 HOH HOH . E 4 HOH A 118 418 1003 HOH HOH . E 4 HOH A 119 419 1030 HOH HOH . E 4 HOH A 120 420 1033 HOH HOH . E 4 HOH A 121 421 1092 HOH HOH . E 4 HOH A 122 422 1051 HOH HOH . E 4 HOH A 123 423 1024 HOH HOH . E 4 HOH A 124 424 1062 HOH HOH . E 4 HOH A 125 425 1063 HOH HOH . E 4 HOH A 126 426 1096 HOH HOH . E 4 HOH A 127 427 1100 HOH HOH . E 4 HOH A 128 428 1054 HOH HOH . E 4 HOH A 129 429 1043 HOH HOH . E 4 HOH A 130 430 26 HOH HOH . E 4 HOH A 131 431 1120 HOH HOH . E 4 HOH A 132 432 18 HOH HOH . E 4 HOH A 133 433 19 HOH HOH . E 4 HOH A 134 434 1046 HOH HOH . E 4 HOH A 135 435 1093 HOH HOH . E 4 HOH A 136 436 1173 HOH HOH . E 4 HOH A 137 437 1067 HOH HOH . E 4 HOH A 138 438 1038 HOH HOH . E 4 HOH A 139 439 2 HOH HOH . E 4 HOH A 140 440 1037 HOH HOH . E 4 HOH A 141 441 1041 HOH HOH . E 4 HOH A 142 442 1128 HOH HOH . E 4 HOH A 143 443 1123 HOH HOH . E 4 HOH A 144 444 1009 HOH HOH . E 4 HOH A 145 445 1005 HOH HOH . E 4 HOH A 146 446 1058 HOH HOH . E 4 HOH A 147 447 1097 HOH HOH . E 4 HOH A 148 448 1163 HOH HOH . E 4 HOH A 149 449 1135 HOH HOH . E 4 HOH A 150 450 24 HOH HOH . E 4 HOH A 151 451 1150 HOH HOH . E 4 HOH A 152 452 1078 HOH HOH . E 4 HOH A 153 453 1176 HOH HOH . E 4 HOH A 154 454 1177 HOH HOH . E 4 HOH A 155 455 1158 HOH HOH . E 4 HOH A 156 456 1132 HOH HOH . E 4 HOH A 157 457 1108 HOH HOH . E 4 HOH A 158 458 1154 HOH HOH . E 4 HOH A 159 459 1010 HOH HOH . E 4 HOH A 160 460 1013 HOH HOH . E 4 HOH A 161 461 1109 HOH HOH . E 4 HOH A 162 462 1133 HOH HOH . E 4 HOH A 163 463 1130 HOH HOH . E 4 HOH A 164 464 23 HOH HOH . E 4 HOH A 165 465 1149 HOH HOH . E 4 HOH A 166 466 1161 HOH HOH . E 4 HOH A 167 467 1131 HOH HOH . E 4 HOH A 168 468 1088 HOH HOH . E 4 HOH A 169 469 1025 HOH HOH . E 4 HOH A 170 470 1144 HOH HOH . E 4 HOH A 171 471 1129 HOH HOH . E 4 HOH A 172 472 1151 HOH HOH . E 4 HOH A 173 473 1002 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . D 3 27.403 -1.667 -7.516 0.61 26.96 ? O1 P6G 202 A 1 HETATM 2 C C2 P6G . . . D 3 27.219 -2.631 -6.455 0.61 24.08 ? C2 P6G 202 A 1 HETATM 3 C C3 P6G . . . D 3 27.751 -3.968 -6.957 0.61 19.51 ? C3 P6G 202 A 1 HETATM 4 O O4 P6G . . . D 3 26.989 -4.509 -7.999 0.61 19.43 ? O4 P6G 202 A 1 HETATM 5 C C5 P6G . . . D 3 27.643 -5.647 -8.556 0.61 18.22 ? C5 P6G 202 A 1 HETATM 6 C C6 P6G . . . D 3 26.687 -6.176 -9.639 0.61 19.06 ? C6 P6G 202 A 1 HETATM 7 O O7 P6G . . . D 3 26.759 -5.338 -10.754 0.61 16.96 ? O7 P6G 202 A 1 HETATM 8 C C8 P6G . . . D 3 25.989 -5.809 -11.865 0.61 16.95 ? C8 P6G 202 A 1 HETATM 9 C C9 P6G . . . D 3 26.075 -4.873 -13.016 0.61 15.69 ? C9 P6G 202 A 1 HETATM 10 O O10 P6G . . . D 3 25.506 -3.626 -12.678 0.61 14.28 ? O10 P6G 202 A 1 HETATM 11 C C11 P6G . . . D 3 25.506 -2.73 -13.759 0.61 16.95 ? C11 P6G 202 A 1 HETATM 12 C C12 P6G . . . D 3 24.556 -1.6 -13.469 0.61 15.61 ? C12 P6G 202 A 1 HETATM 13 O O13 P6G . . . D 3 25.062 -0.883 -12.317 0.61 15.23 ? O13 P6G 202 A 1 HETATM 14 C C14 P6G . . . D 3 24.254 0.272 -12.041 0.61 15.15 ? C14 P6G 202 A 1 HETATM 15 C C15 P6G . . . D 3 24.763 0.945 -10.782 0.61 17.1 ? C15 P6G 202 A 1 HETATM 16 O O16 P6G . . . D 3 24.878 0.067 -9.65 0.61 15.44 ? O16 P6G 202 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #