data_7VBU # _model_server_result.job_id 0FQb38vkIB7pTGZLXyGWNg _model_server_result.datetime_utc '2024-12-27 14:18:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vbu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 7VBU # _exptl.entry_id 7VBU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7VBU _cell.length_a 109.462 _cell.length_b 109.462 _cell.length_c 84.093 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VBU _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 54.731 94.796873 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 35 n n C OXT ACT sing 36 n n C CH3 ACT sing 37 n n CH3 H1 ACT sing 38 n n CH3 H2 ACT sing 39 n n CH3 H3 ACT sing 40 n n # _atom_sites.entry_id 7VBU _atom_sites.fract_transf_matrix[1][1] 0.009136 _atom_sites.fract_transf_matrix[1][2] 0.005274 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 501 1000 CL CL . C 3 ACT A 1 502 2000 ACT ACT . D 3 ACT A 1 503 2001 ACT ACT . E 3 ACT A 1 504 2002 ACT ACT . F 4 DMS A 1 505 2100 DMS DMS . G 4 DMS A 1 506 2101 DMS DMS . H 5 6I4 A 1 507 5000 6I4 MOL . I 6 HOH A 1 601 31 HOH HOH . I 6 HOH A 2 602 118 HOH HOH . I 6 HOH A 3 603 21 HOH HOH . I 6 HOH A 4 604 128 HOH HOH . I 6 HOH A 5 605 25 HOH HOH . I 6 HOH A 6 606 142 HOH HOH . I 6 HOH A 7 607 20 HOH HOH . I 6 HOH A 8 608 61 HOH HOH . I 6 HOH A 9 609 72 HOH HOH . I 6 HOH A 10 610 64 HOH HOH . I 6 HOH A 11 611 79 HOH HOH . I 6 HOH A 12 612 37 HOH HOH . I 6 HOH A 13 613 29 HOH HOH . I 6 HOH A 14 614 106 HOH HOH . I 6 HOH A 15 615 117 HOH HOH . I 6 HOH A 16 616 16 HOH HOH . I 6 HOH A 17 617 138 HOH HOH . I 6 HOH A 18 618 43 HOH HOH . I 6 HOH A 19 619 52 HOH HOH . I 6 HOH A 20 620 47 HOH HOH . I 6 HOH A 21 621 78 HOH HOH . I 6 HOH A 22 622 2 HOH HOH . I 6 HOH A 23 623 120 HOH HOH . I 6 HOH A 24 624 132 HOH HOH . I 6 HOH A 25 625 19 HOH HOH . I 6 HOH A 26 626 1 HOH HOH . I 6 HOH A 27 627 82 HOH HOH . I 6 HOH A 28 628 126 HOH HOH . I 6 HOH A 29 629 91 HOH HOH . I 6 HOH A 30 630 95 HOH HOH . I 6 HOH A 31 631 39 HOH HOH . I 6 HOH A 32 632 54 HOH HOH . I 6 HOH A 33 633 65 HOH HOH . I 6 HOH A 34 634 68 HOH HOH . I 6 HOH A 35 635 77 HOH HOH . I 6 HOH A 36 636 5 HOH HOH . I 6 HOH A 37 637 14 HOH HOH . I 6 HOH A 38 638 17 HOH HOH . I 6 HOH A 39 639 40 HOH HOH . I 6 HOH A 40 640 7 HOH HOH . I 6 HOH A 41 641 27 HOH HOH . I 6 HOH A 42 642 112 HOH HOH . I 6 HOH A 43 643 10 HOH HOH . I 6 HOH A 44 644 11 HOH HOH . I 6 HOH A 45 645 88 HOH HOH . I 6 HOH A 46 646 70 HOH HOH . I 6 HOH A 47 647 67 HOH HOH . I 6 HOH A 48 648 107 HOH HOH . I 6 HOH A 49 649 46 HOH HOH . I 6 HOH A 50 650 36 HOH HOH . I 6 HOH A 51 651 58 HOH HOH . I 6 HOH A 52 652 85 HOH HOH . I 6 HOH A 53 653 32 HOH HOH . I 6 HOH A 54 654 98 HOH HOH . I 6 HOH A 55 655 3 HOH HOH . I 6 HOH A 56 656 105 HOH HOH . I 6 HOH A 57 657 86 HOH HOH . I 6 HOH A 58 658 15 HOH HOH . I 6 HOH A 59 659 136 HOH HOH . I 6 HOH A 60 660 6 HOH HOH . I 6 HOH A 61 661 13 HOH HOH . I 6 HOH A 62 662 73 HOH HOH . I 6 HOH A 63 663 28 HOH HOH . I 6 HOH A 64 664 18 HOH HOH . I 6 HOH A 65 665 33 HOH HOH . I 6 HOH A 66 666 42 HOH HOH . I 6 HOH A 67 667 9 HOH HOH . I 6 HOH A 68 668 101 HOH HOH . I 6 HOH A 69 669 124 HOH HOH . I 6 HOH A 70 670 129 HOH HOH . I 6 HOH A 71 671 125 HOH HOH . I 6 HOH A 72 672 56 HOH HOH . I 6 HOH A 73 673 127 HOH HOH . I 6 HOH A 74 674 63 HOH HOH . I 6 HOH A 75 675 48 HOH HOH . I 6 HOH A 76 676 69 HOH HOH . I 6 HOH A 77 677 49 HOH HOH . I 6 HOH A 78 678 139 HOH HOH . I 6 HOH A 79 679 12 HOH HOH . I 6 HOH A 80 680 60 HOH HOH . I 6 HOH A 81 681 38 HOH HOH . I 6 HOH A 82 682 76 HOH HOH . I 6 HOH A 83 683 51 HOH HOH . I 6 HOH A 84 684 103 HOH HOH . I 6 HOH A 85 685 75 HOH HOH . I 6 HOH A 86 686 99 HOH HOH . I 6 HOH A 87 687 116 HOH HOH . I 6 HOH A 88 688 113 HOH HOH . I 6 HOH A 89 689 137 HOH HOH . I 6 HOH A 90 690 110 HOH HOH . I 6 HOH A 91 691 87 HOH HOH . I 6 HOH A 92 692 96 HOH HOH . I 6 HOH A 93 693 97 HOH HOH . I 6 HOH A 94 694 26 HOH HOH . I 6 HOH A 95 695 35 HOH HOH . I 6 HOH A 96 696 50 HOH HOH . I 6 HOH A 97 697 123 HOH HOH . I 6 HOH A 98 698 23 HOH HOH . I 6 HOH A 99 699 53 HOH HOH . I 6 HOH A 100 700 30 HOH HOH . I 6 HOH A 101 701 119 HOH HOH . I 6 HOH A 102 702 57 HOH HOH . I 6 HOH A 103 703 62 HOH HOH . I 6 HOH A 104 704 89 HOH HOH . I 6 HOH A 105 705 131 HOH HOH . I 6 HOH A 106 706 8 HOH HOH . I 6 HOH A 107 707 45 HOH HOH . I 6 HOH A 108 708 22 HOH HOH . I 6 HOH A 109 709 135 HOH HOH . I 6 HOH A 110 710 81 HOH HOH . I 6 HOH A 111 711 133 HOH HOH . I 6 HOH A 112 712 41 HOH HOH . I 6 HOH A 113 713 55 HOH HOH . I 6 HOH A 114 714 100 HOH HOH . I 6 HOH A 115 715 83 HOH HOH . I 6 HOH A 116 716 24 HOH HOH . I 6 HOH A 117 717 44 HOH HOH . I 6 HOH A 118 718 122 HOH HOH . I 6 HOH A 119 719 74 HOH HOH . I 6 HOH A 120 720 92 HOH HOH . I 6 HOH A 121 721 121 HOH HOH . I 6 HOH A 122 722 66 HOH HOH . I 6 HOH A 123 723 140 HOH HOH . I 6 HOH A 124 724 104 HOH HOH . I 6 HOH A 125 725 84 HOH HOH . I 6 HOH A 126 726 34 HOH HOH . I 6 HOH A 127 727 111 HOH HOH . I 6 HOH A 128 728 4 HOH HOH . I 6 HOH A 129 729 80 HOH HOH . I 6 HOH A 130 730 108 HOH HOH . I 6 HOH A 131 731 94 HOH HOH . I 6 HOH A 132 732 93 HOH HOH . I 6 HOH A 133 733 114 HOH HOH . I 6 HOH A 134 734 130 HOH HOH . I 6 HOH A 135 735 141 HOH HOH . I 6 HOH A 136 736 102 HOH HOH . I 6 HOH A 137 737 90 HOH HOH . I 6 HOH A 138 738 115 HOH HOH . I 6 HOH A 139 739 59 HOH HOH . I 6 HOH A 140 740 71 HOH HOH . I 6 HOH A 141 741 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 3 38.987 48.613 80.115 1 57.26 ? C ACT 504 A 1 HETATM 2 O O ACT . . . E 3 38.742 47.867 79.126 1 55.88 ? O ACT 504 A 1 HETATM 3 O OXT ACT . . . E 3 38.298 49.565 80.578 1 58.65 ? OXT ACT 504 A 1 HETATM 4 C CH3 ACT . . . E 3 40.319 48.334 80.884 1 47.52 ? CH3 ACT 504 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #