data_7VBV # _model_server_result.job_id xaycp-06m9EdG70hrZmksA _model_server_result.datetime_utc '2024-11-22 23:08:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vbv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 7VBV # _exptl.entry_id 7VBV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7VBV _cell.length_a 109.3 _cell.length_b 109.3 _cell.length_c 84.288 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VBV _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall 'P 31' _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 J N N ? 2 K N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 41 n n C OXT ACT sing 42 n n C CH3 ACT sing 43 n n CH3 H1 ACT sing 44 n n CH3 H2 ACT sing 45 n n CH3 H3 ACT sing 46 n n # _atom_sites.entry_id 7VBV _atom_sites.fract_transf_matrix[1][1] 0.009149 _atom_sites.fract_transf_matrix[1][2] 0.005282 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010565 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 501 2000 ACT ACT . D 2 ACT A 1 502 2001 ACT ACT . E 2 ACT A 1 503 2002 ACT ACT . F 3 DMS A 1 504 2100 DMS DMS . G 3 DMS A 1 505 2101 DMS DMS . H 4 67V A 1 506 5000 67V MOL . I 5 CL B 1 501 1000 CL CL . J 2 ACT B 1 502 2000 ACT ACT . K 2 ACT B 1 503 2001 ACT ACT . L 3 DMS B 1 504 2100 DMS DMS . M 3 DMS B 1 505 2101 DMS DMS . N 4 67V B 1 506 5000 67V MOL . O 6 HOH A 1 601 31 HOH HOH . O 6 HOH A 2 602 65 HOH HOH . O 6 HOH A 3 603 12 HOH HOH . O 6 HOH A 4 604 60 HOH HOH . O 6 HOH A 5 605 52 HOH HOH . O 6 HOH A 6 606 63 HOH HOH . O 6 HOH A 7 607 36 HOH HOH . O 6 HOH A 8 608 66 HOH HOH . O 6 HOH A 9 609 11 HOH HOH . O 6 HOH A 10 610 59 HOH HOH . O 6 HOH A 11 611 70 HOH HOH . O 6 HOH A 12 612 81 HOH HOH . O 6 HOH A 13 613 14 HOH HOH . O 6 HOH A 14 614 40 HOH HOH . O 6 HOH A 15 615 62 HOH HOH . O 6 HOH A 16 616 75 HOH HOH . O 6 HOH A 17 617 74 HOH HOH . O 6 HOH A 18 618 23 HOH HOH . O 6 HOH A 19 619 6 HOH HOH . O 6 HOH A 20 620 1 HOH HOH . O 6 HOH A 21 621 67 HOH HOH . O 6 HOH A 22 622 30 HOH HOH . O 6 HOH A 23 623 18 HOH HOH . O 6 HOH A 24 624 4 HOH HOH . O 6 HOH A 25 625 27 HOH HOH . O 6 HOH A 26 626 44 HOH HOH . O 6 HOH A 27 627 54 HOH HOH . O 6 HOH A 28 628 7 HOH HOH . O 6 HOH A 29 629 51 HOH HOH . O 6 HOH A 30 630 41 HOH HOH . O 6 HOH A 31 631 71 HOH HOH . O 6 HOH A 32 632 3 HOH HOH . O 6 HOH A 33 633 19 HOH HOH . O 6 HOH A 34 634 26 HOH HOH . O 6 HOH A 35 635 50 HOH HOH . O 6 HOH A 36 636 55 HOH HOH . O 6 HOH A 37 637 43 HOH HOH . O 6 HOH A 38 638 13 HOH HOH . O 6 HOH A 39 639 8 HOH HOH . O 6 HOH A 40 640 47 HOH HOH . P 6 HOH B 1 601 78 HOH HOH . P 6 HOH B 2 602 73 HOH HOH . P 6 HOH B 3 603 84 HOH HOH . P 6 HOH B 4 604 35 HOH HOH . P 6 HOH B 5 605 58 HOH HOH . P 6 HOH B 6 606 39 HOH HOH . P 6 HOH B 7 607 80 HOH HOH . P 6 HOH B 8 608 16 HOH HOH . P 6 HOH B 9 609 77 HOH HOH . P 6 HOH B 10 610 21 HOH HOH . P 6 HOH B 11 611 42 HOH HOH . P 6 HOH B 12 612 72 HOH HOH . P 6 HOH B 13 613 83 HOH HOH . P 6 HOH B 14 614 57 HOH HOH . P 6 HOH B 15 615 64 HOH HOH . P 6 HOH B 16 616 56 HOH HOH . P 6 HOH B 17 617 17 HOH HOH . P 6 HOH B 18 618 25 HOH HOH . P 6 HOH B 19 619 22 HOH HOH . P 6 HOH B 20 620 82 HOH HOH . P 6 HOH B 21 621 61 HOH HOH . P 6 HOH B 22 622 10 HOH HOH . P 6 HOH B 23 623 68 HOH HOH . P 6 HOH B 24 624 76 HOH HOH . P 6 HOH B 25 625 37 HOH HOH . P 6 HOH B 26 626 2 HOH HOH . P 6 HOH B 27 627 38 HOH HOH . P 6 HOH B 28 628 24 HOH HOH . P 6 HOH B 29 629 69 HOH HOH . P 6 HOH B 30 630 32 HOH HOH . P 6 HOH B 31 631 45 HOH HOH . P 6 HOH B 32 632 28 HOH HOH . P 6 HOH B 33 633 33 HOH HOH . P 6 HOH B 34 634 20 HOH HOH . P 6 HOH B 35 635 46 HOH HOH . P 6 HOH B 36 636 48 HOH HOH . P 6 HOH B 37 637 34 HOH HOH . P 6 HOH B 38 638 29 HOH HOH . P 6 HOH B 39 639 9 HOH HOH . P 6 HOH B 40 640 53 HOH HOH . P 6 HOH B 41 641 5 HOH HOH . P 6 HOH B 42 642 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 2 38.507 49.048 79.9 1 55.3 ? C ACT 503 A 1 HETATM 2 O O ACT . . . E 2 37.329 49.25 79.492 1 56.92 ? O ACT 503 A 1 HETATM 3 O OXT ACT . . . E 2 39.165 49.651 80.795 1 59.97 ? OXT ACT 503 A 1 HETATM 4 C CH3 ACT . . . E 2 39.241 47.915 79.185 1 38.05 ? CH3 ACT 503 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #