data_7VBX # _model_server_result.job_id MgCiJIWR8-_jNgX41WAsHQ _model_server_result.datetime_utc '2024-11-12 19:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vbx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7VBX # _exptl.entry_id 7VBX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7VBX _cell.length_a 109.155 _cell.length_b 109.155 _cell.length_c 84.359 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VBX _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 54.5775 94.531003 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 77 n n C OXT ACT sing 78 n n C CH3 ACT sing 79 n n CH3 H1 ACT sing 80 n n CH3 H2 ACT sing 81 n n CH3 H3 ACT sing 82 n n # _atom_sites.entry_id 7VBX _atom_sites.fract_transf_matrix[1][1] 0.009161 _atom_sites.fract_transf_matrix[1][2] 0.005289 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 501 1000 CL CL . C 3 ACT A 1 502 2001 ACT ACT . D 4 DMS A 1 503 2100 DMS DMS . E 4 DMS A 1 504 2101 DMS DMS . F 5 5ZP A 1 505 5000 5ZP MOL . G 6 HOH A 1 601 54 HOH HOH . G 6 HOH A 2 602 2 HOH HOH . G 6 HOH A 3 603 53 HOH HOH . G 6 HOH A 4 604 1 HOH HOH . G 6 HOH A 5 605 51 HOH HOH . G 6 HOH A 6 606 11 HOH HOH . G 6 HOH A 7 607 56 HOH HOH . G 6 HOH A 8 608 7 HOH HOH . G 6 HOH A 9 609 9 HOH HOH . G 6 HOH A 10 610 32 HOH HOH . G 6 HOH A 11 611 48 HOH HOH . G 6 HOH A 12 612 6 HOH HOH . G 6 HOH A 13 613 13 HOH HOH . G 6 HOH A 14 614 20 HOH HOH . G 6 HOH A 15 615 19 HOH HOH . G 6 HOH A 16 616 44 HOH HOH . G 6 HOH A 17 617 4 HOH HOH . G 6 HOH A 18 618 45 HOH HOH . G 6 HOH A 19 619 26 HOH HOH . G 6 HOH A 20 620 21 HOH HOH . G 6 HOH A 21 621 17 HOH HOH . G 6 HOH A 22 622 30 HOH HOH . G 6 HOH A 23 623 16 HOH HOH . G 6 HOH A 24 624 8 HOH HOH . G 6 HOH A 25 625 3 HOH HOH . G 6 HOH A 26 626 33 HOH HOH . G 6 HOH A 27 627 12 HOH HOH . G 6 HOH A 28 628 27 HOH HOH . G 6 HOH A 29 629 25 HOH HOH . G 6 HOH A 30 630 43 HOH HOH . G 6 HOH A 31 631 36 HOH HOH . G 6 HOH A 32 632 34 HOH HOH . G 6 HOH A 33 633 40 HOH HOH . G 6 HOH A 34 634 10 HOH HOH . G 6 HOH A 35 635 31 HOH HOH . G 6 HOH A 36 636 39 HOH HOH . G 6 HOH A 37 637 35 HOH HOH . G 6 HOH A 38 638 24 HOH HOH . G 6 HOH A 39 639 29 HOH HOH . G 6 HOH A 40 640 28 HOH HOH . G 6 HOH A 41 641 23 HOH HOH . G 6 HOH A 42 642 38 HOH HOH . G 6 HOH A 43 643 5 HOH HOH . G 6 HOH A 44 644 37 HOH HOH . G 6 HOH A 45 645 55 HOH HOH . G 6 HOH A 46 646 14 HOH HOH . G 6 HOH A 47 647 22 HOH HOH . G 6 HOH A 48 648 15 HOH HOH . G 6 HOH A 49 649 49 HOH HOH . G 6 HOH A 50 650 18 HOH HOH . G 6 HOH A 51 651 47 HOH HOH . G 6 HOH A 52 652 50 HOH HOH . G 6 HOH A 53 653 46 HOH HOH . G 6 HOH A 54 654 52 HOH HOH . G 6 HOH A 55 655 42 HOH HOH . G 6 HOH A 56 656 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . C 3 56.106 44.127 79.882 1 70.79 ? C ACT 502 A 1 HETATM 2 O O ACT . . . C 3 56.887 44.284 78.904 1 73.24 ? O ACT 502 A 1 HETATM 3 O OXT ACT . . . C 3 54.873 43.852 79.874 1 58.71 ? OXT ACT 502 A 1 HETATM 4 C CH3 ACT . . . C 3 56.735 44.292 81.304 1 70.74 ? CH3 ACT 502 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #