data_7VC7
#
_model_server_result.job_id            GNvIucs_bv2b07AraJPFyg 
_model_server_result.datetime_utc      '2024-12-26 18:06:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7vc7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1702}' 
#
_entry.id    7VC7 
#
_exptl.entry_id    7VC7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7VC7 
_cell.length_a            79.367 
_cell.length_b            91.071 
_cell.length_c            106.012 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7VC7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 F N N 
? 3 H N N 
? 3 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 16 A CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 182 A CYS 182 1_555 A SG CYS 221 A CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 232 A CYS 232 1_555 A SG CYS 243 A CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 268 A CYS 268 1_555 A SG CYS 300 A CYS 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
covale ? covale1 A ND2 ASN 17 A ASN 17 1_555 T C1 NAG . A NAG 1719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 A ND2 ASN 40 A ASN 40 1_555 U C1 NAG . A NAG 1720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? 
covale ? covale3 A ND2 ASN 74 A ASN 74 1_555 V C1 NAG . A NAG 1721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale4 A ND2 ASN 279 A ASN 279 1_555 W C1 NAG . A NAG 1722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale5 A ND2 ASN 398 A ASN 398 1_555 X C1 NAG . A NAG 1723 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale6 A ND2 ASN 432 A ASN 432 1_555 Y C1 NAG . A NAG 1724 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.624 ? 
covale ? covale7 A ND2 ASN 437 A ASN 437 1_555 Z C1 NAG . A NAG 1725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 313 n n 
C1 C2 PEG sing 314 n n 
C1 H11 PEG sing 315 n n 
C1 H12 PEG sing 316 n n 
O1 HO1 PEG sing 317 n n 
C2 O2 PEG sing 318 n n 
C2 H21 PEG sing 319 n n 
C2 H22 PEG sing 320 n n 
O2 C3 PEG sing 321 n n 
C3 C4 PEG sing 322 n n 
C3 H31 PEG sing 323 n n 
C3 H32 PEG sing 324 n n 
C4 O4 PEG sing 325 n n 
C4 H41 PEG sing 326 n n 
C4 H42 PEG sing 327 n n 
O4 HO4 PEG sing 328 n n 
#
_atom_sites.entry_id                     7VC7 
_atom_sites.fract_transf_matrix[1][1]    0.0126 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01098 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009433 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1PE A 1 1701 1701 1PE 1PE . 
C 3 PEG A 1 1702 1801 PEG PEG . 
D 3 PEG A 1 1703 1901 PEG PEG . 
E 4 EDO A 1 1704 2001 EDO EDO . 
F 3 PEG A 1 1705 2101 PEG PEG . 
G 2 1PE A 1 1706 2201 1PE 1PE . 
H 3 PEG A 1 1707 2301 PEG PEG . 
I 2 1PE A 1 1708 2401 1PE 1PE . 
J 2 1PE A 1 1709 2601 1PE 1PE . 
K 2 1PE A 1 1710 2701 1PE 1PE . 
L 2 1PE A 1 1711 2801 1PE 1PE . 
M 2 1PE A 1 1712 2901 1PE 1PE . 
N 2 1PE A 1 1713 3001 1PE 1PE . 
O 2 1PE A 1 1714 3101 1PE 1PE . 
P 2 1PE A 1 1715 3401 1PE 1PE . 
Q 2 1PE A 1 1716 3501 1PE 1PE . 
R 2 1PE A 1 1717 3601 1PE 1PE . 
S 3 PEG A 1 1718 3701 PEG PEG . 
T 5 NAG A 1 1719 801 NAG NAG . 
U 5 NAG A 1 1720 901 NAG NAG . 
V 5 NAG A 1 1721 1001 NAG NAG . 
W 5 NAG A 1 1722 1101 NAG NAG . 
X 5 NAG A 1 1723 1301 NAG NAG . 
Y 5 NAG A 1 1724 1401 NAG NAG . 
Z 5 NAG A 1 1725 1501 NAG NAG . 
AA 6 XYP A 1 1726 1601 XYP XYP . 
BA 7 HOH A 1 1801 4166 HOH HOH . 
BA 7 HOH A 2 1802 4218 HOH HOH . 
BA 7 HOH A 3 1803 4026 HOH HOH . 
BA 7 HOH A 4 1804 4025 HOH HOH . 
BA 7 HOH A 5 1805 4164 HOH HOH . 
BA 7 HOH A 6 1806 4188 HOH HOH . 
BA 7 HOH A 7 1807 4065 HOH HOH . 
BA 7 HOH A 8 1808 4134 HOH HOH . 
BA 7 HOH A 9 1809 4141 HOH HOH . 
BA 7 HOH A 10 1810 4147 HOH HOH . 
BA 7 HOH A 11 1811 4206 HOH HOH . 
BA 7 HOH A 12 1812 4215 HOH HOH . 
BA 7 HOH A 13 1813 4013 HOH HOH . 
BA 7 HOH A 14 1814 4137 HOH HOH . 
BA 7 HOH A 15 1815 4136 HOH HOH . 
BA 7 HOH A 16 1816 4117 HOH HOH . 
BA 7 HOH A 17 1817 4067 HOH HOH . 
BA 7 HOH A 18 1818 4101 HOH HOH . 
BA 7 HOH A 19 1819 4080 HOH HOH . 
BA 7 HOH A 20 1820 4056 HOH HOH . 
BA 7 HOH A 21 1821 4152 HOH HOH . 
BA 7 HOH A 22 1822 4190 HOH HOH . 
BA 7 HOH A 23 1823 4110 HOH HOH . 
BA 7 HOH A 24 1824 4112 HOH HOH . 
BA 7 HOH A 25 1825 4083 HOH HOH . 
BA 7 HOH A 26 1826 4135 HOH HOH . 
BA 7 HOH A 27 1827 4198 HOH HOH . 
BA 7 HOH A 28 1828 4160 HOH HOH . 
BA 7 HOH A 29 1829 4200 HOH HOH . 
BA 7 HOH A 30 1830 4208 HOH HOH . 
BA 7 HOH A 31 1831 4087 HOH HOH . 
BA 7 HOH A 32 1832 4118 HOH HOH . 
BA 7 HOH A 33 1833 4157 HOH HOH . 
BA 7 HOH A 34 1834 4151 HOH HOH . 
BA 7 HOH A 35 1835 4059 HOH HOH . 
BA 7 HOH A 36 1836 4124 HOH HOH . 
BA 7 HOH A 37 1837 4167 HOH HOH . 
BA 7 HOH A 38 1838 4089 HOH HOH . 
BA 7 HOH A 39 1839 4015 HOH HOH . 
BA 7 HOH A 40 1840 4171 HOH HOH . 
BA 7 HOH A 41 1841 4036 HOH HOH . 
BA 7 HOH A 42 1842 4169 HOH HOH . 
BA 7 HOH A 43 1843 4082 HOH HOH . 
BA 7 HOH A 44 1844 4196 HOH HOH . 
BA 7 HOH A 45 1845 4183 HOH HOH . 
BA 7 HOH A 46 1846 4189 HOH HOH . 
BA 7 HOH A 47 1847 4177 HOH HOH . 
BA 7 HOH A 48 1848 4076 HOH HOH . 
BA 7 HOH A 49 1849 4173 HOH HOH . 
BA 7 HOH A 50 1850 4114 HOH HOH . 
BA 7 HOH A 51 1851 4199 HOH HOH . 
BA 7 HOH A 52 1852 4115 HOH HOH . 
BA 7 HOH A 53 1853 4068 HOH HOH . 
BA 7 HOH A 54 1854 4170 HOH HOH . 
BA 7 HOH A 55 1855 4130 HOH HOH . 
BA 7 HOH A 56 1856 4195 HOH HOH . 
BA 7 HOH A 57 1857 4062 HOH HOH . 
BA 7 HOH A 58 1858 4129 HOH HOH . 
BA 7 HOH A 59 1859 4063 HOH HOH . 
BA 7 HOH A 60 1860 4156 HOH HOH . 
BA 7 HOH A 61 1861 4106 HOH HOH . 
BA 7 HOH A 62 1862 4123 HOH HOH . 
BA 7 HOH A 63 1863 4030 HOH HOH . 
BA 7 HOH A 64 1864 4120 HOH HOH . 
BA 7 HOH A 65 1865 4149 HOH HOH . 
BA 7 HOH A 66 1866 4055 HOH HOH . 
BA 7 HOH A 67 1867 4071 HOH HOH . 
BA 7 HOH A 68 1868 4153 HOH HOH . 
BA 7 HOH A 69 1869 4074 HOH HOH . 
BA 7 HOH A 70 1870 4092 HOH HOH . 
BA 7 HOH A 71 1871 4158 HOH HOH . 
BA 7 HOH A 72 1872 4035 HOH HOH . 
BA 7 HOH A 73 1873 4185 HOH HOH . 
BA 7 HOH A 74 1874 4144 HOH HOH . 
BA 7 HOH A 75 1875 4210 HOH HOH . 
BA 7 HOH A 76 1876 4029 HOH HOH . 
BA 7 HOH A 77 1877 4212 HOH HOH . 
BA 7 HOH A 78 1878 4133 HOH HOH . 
BA 7 HOH A 79 1879 4048 HOH HOH . 
BA 7 HOH A 80 1880 4066 HOH HOH . 
BA 7 HOH A 81 1881 4078 HOH HOH . 
BA 7 HOH A 82 1882 4081 HOH HOH . 
BA 7 HOH A 83 1883 4051 HOH HOH . 
BA 7 HOH A 84 1884 4223 HOH HOH . 
BA 7 HOH A 85 1885 4058 HOH HOH . 
BA 7 HOH A 86 1886 4095 HOH HOH . 
BA 7 HOH A 87 1887 4220 HOH HOH . 
BA 7 HOH A 88 1888 4162 HOH HOH . 
BA 7 HOH A 89 1889 4221 HOH HOH . 
BA 7 HOH A 90 1890 4060 HOH HOH . 
BA 7 HOH A 91 1891 4086 HOH HOH . 
BA 7 HOH A 92 1892 4050 HOH HOH . 
BA 7 HOH A 93 1893 4088 HOH HOH . 
BA 7 HOH A 94 1894 4182 HOH HOH . 
BA 7 HOH A 95 1895 4145 HOH HOH . 
BA 7 HOH A 96 1896 4070 HOH HOH . 
BA 7 HOH A 97 1897 4079 HOH HOH . 
BA 7 HOH A 98 1898 4174 HOH HOH . 
BA 7 HOH A 99 1899 4094 HOH HOH . 
BA 7 HOH A 100 1900 4085 HOH HOH . 
BA 7 HOH A 101 1901 4054 HOH HOH . 
BA 7 HOH A 102 1902 4109 HOH HOH . 
BA 7 HOH A 103 1903 4010 HOH HOH . 
BA 7 HOH A 104 1904 4159 HOH HOH . 
BA 7 HOH A 105 1905 4111 HOH HOH . 
BA 7 HOH A 106 1906 4053 HOH HOH . 
BA 7 HOH A 107 1907 4072 HOH HOH . 
BA 7 HOH A 108 1908 4128 HOH HOH . 
BA 7 HOH A 109 1909 4140 HOH HOH . 
BA 7 HOH A 110 1910 4184 HOH HOH . 
BA 7 HOH A 111 1911 4034 HOH HOH . 
BA 7 HOH A 112 1912 4191 HOH HOH . 
BA 7 HOH A 113 1913 4052 HOH HOH . 
BA 7 HOH A 114 1914 4132 HOH HOH . 
BA 7 HOH A 115 1915 4175 HOH HOH . 
BA 7 HOH A 116 1916 4121 HOH HOH . 
BA 7 HOH A 117 1917 4168 HOH HOH . 
BA 7 HOH A 118 1918 4139 HOH HOH . 
BA 7 HOH A 119 1919 4091 HOH HOH . 
BA 7 HOH A 120 1920 4075 HOH HOH . 
BA 7 HOH A 121 1921 4108 HOH HOH . 
BA 7 HOH A 122 1922 4179 HOH HOH . 
BA 7 HOH A 123 1923 4122 HOH HOH . 
BA 7 HOH A 124 1924 4103 HOH HOH . 
BA 7 HOH A 125 1925 4119 HOH HOH . 
BA 7 HOH A 126 1926 4213 HOH HOH . 
BA 7 HOH A 127 1927 4125 HOH HOH . 
BA 7 HOH A 128 1928 4049 HOH HOH . 
BA 7 HOH A 129 1929 4105 HOH HOH . 
BA 7 HOH A 130 1930 4165 HOH HOH . 
BA 7 HOH A 131 1931 4181 HOH HOH . 
BA 7 HOH A 132 1932 4163 HOH HOH . 
BA 7 HOH A 133 1933 4069 HOH HOH . 
BA 7 HOH A 134 1934 4116 HOH HOH . 
BA 7 HOH A 135 1935 4155 HOH HOH . 
BA 7 HOH A 136 1936 4077 HOH HOH . 
BA 7 HOH A 137 1937 4107 HOH HOH . 
BA 7 HOH A 138 1938 4203 HOH HOH . 
BA 7 HOH A 139 1939 4064 HOH HOH . 
BA 7 HOH A 140 1940 4154 HOH HOH . 
BA 7 HOH A 141 1941 4084 HOH HOH . 
BA 7 HOH A 142 1942 4211 HOH HOH . 
BA 7 HOH A 143 1943 4148 HOH HOH . 
BA 7 HOH A 144 1944 4161 HOH HOH . 
BA 7 HOH A 145 1945 4057 HOH HOH . 
BA 7 HOH A 146 1946 4219 HOH HOH . 
BA 7 HOH A 147 1947 4027 HOH HOH . 
BA 7 HOH A 148 1948 4127 HOH HOH . 
BA 7 HOH A 149 1949 4131 HOH HOH . 
BA 7 HOH A 150 1950 4187 HOH HOH . 
BA 7 HOH A 151 1951 4202 HOH HOH . 
BA 7 HOH A 152 1952 4197 HOH HOH . 
BA 7 HOH A 153 1953 4102 HOH HOH . 
BA 7 HOH A 154 1954 4037 HOH HOH . 
BA 7 HOH A 155 1955 4172 HOH HOH . 
BA 7 HOH A 156 1956 4138 HOH HOH . 
BA 7 HOH A 157 1957 4113 HOH HOH . 
BA 7 HOH A 158 1958 4032 HOH HOH . 
BA 7 HOH A 159 1959 4142 HOH HOH . 
BA 7 HOH A 160 1960 4096 HOH HOH . 
BA 7 HOH A 161 1961 4093 HOH HOH . 
BA 7 HOH A 162 1962 4143 HOH HOH . 
BA 7 HOH A 163 1963 4180 HOH HOH . 
BA 7 HOH A 164 1964 4098 HOH HOH . 
BA 7 HOH A 165 1965 4033 HOH HOH . 
BA 7 HOH A 166 1966 4099 HOH HOH . 
BA 7 HOH A 167 1967 4097 HOH HOH . 
BA 7 HOH A 168 1968 4146 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . C 3 5.218 -10.548 56.568 1 42.58 ? C1 PEG 1702 A 1 
HETATM 2 O O1 PEG . . . C 3 5.055 -11.9 56.956 1 40.03 ? O1 PEG 1702 A 1 
HETATM 3 C C2 PEG . . . C 3 6.235 -9.836 57.405 1 45.74 ? C2 PEG 1702 A 1 
HETATM 4 O O2 PEG . . . C 3 7.542 -10.332 57.135 1 43.08 ? O2 PEG 1702 A 1 
HETATM 5 C C3 PEG . . . C 3 8.068 -9.87 55.896 1 41.53 ? C3 PEG 1702 A 1 
HETATM 6 C C4 PEG . . . C 3 9.522 -10.22 55.796 1 50.97 ? C4 PEG 1702 A 1 
HETATM 7 O O4 PEG . . . C 3 10.128 -9.682 54.637 1 42.38 ? O4 PEG 1702 A 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           374 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           7 
#