data_7VCJ # _model_server_result.job_id --eAmug3nS2e57flaMn4Dw _model_server_result.datetime_utc '2025-03-06 01:35:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7vcj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7VCJ # _exptl.entry_id 7VCJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.48 _cell.angle_gamma 90 _cell.entry_id 7VCJ _cell.length_a 78.152 _cell.length_b 58.214 _cell.length_c 75.416 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7VCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 263 n n P O2 PO4 sing 264 n n P O3 PO4 sing 265 n n P O4 PO4 sing 266 n n # _atom_sites.entry_id 7VCJ _atom_sites.fract_transf_matrix[1][1] 0.012796 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002366 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 401 401 PO4 PO4 . C 3 NO3 A 1 402 501 NO3 NO3 . D 4 HOH A 1 501 631 HOH HOH . D 4 HOH A 2 502 848 HOH HOH . D 4 HOH A 3 503 653 HOH HOH . D 4 HOH A 4 504 880 HOH HOH . D 4 HOH A 5 505 776 HOH HOH . D 4 HOH A 6 506 818 HOH HOH . D 4 HOH A 7 507 878 HOH HOH . D 4 HOH A 8 508 713 HOH HOH . D 4 HOH A 9 509 609 HOH HOH . D 4 HOH A 10 510 789 HOH HOH . D 4 HOH A 11 511 688 HOH HOH . D 4 HOH A 12 512 920 HOH HOH . D 4 HOH A 13 513 604 HOH HOH . D 4 HOH A 14 514 840 HOH HOH . D 4 HOH A 15 515 752 HOH HOH . D 4 HOH A 16 516 716 HOH HOH . D 4 HOH A 17 517 733 HOH HOH . D 4 HOH A 18 518 691 HOH HOH . D 4 HOH A 19 519 620 HOH HOH . D 4 HOH A 20 520 742 HOH HOH . D 4 HOH A 21 521 871 HOH HOH . D 4 HOH A 22 522 659 HOH HOH . D 4 HOH A 23 523 883 HOH HOH . D 4 HOH A 24 524 686 HOH HOH . D 4 HOH A 25 525 718 HOH HOH . D 4 HOH A 26 526 672 HOH HOH . D 4 HOH A 27 527 764 HOH HOH . D 4 HOH A 28 528 794 HOH HOH . D 4 HOH A 29 529 785 HOH HOH . D 4 HOH A 30 530 768 HOH HOH . D 4 HOH A 31 531 803 HOH HOH . D 4 HOH A 32 532 664 HOH HOH . D 4 HOH A 33 533 601 HOH HOH . D 4 HOH A 34 534 603 HOH HOH . D 4 HOH A 35 535 788 HOH HOH . D 4 HOH A 36 536 810 HOH HOH . D 4 HOH A 37 537 616 HOH HOH . D 4 HOH A 38 538 717 HOH HOH . D 4 HOH A 39 539 881 HOH HOH . D 4 HOH A 40 540 614 HOH HOH . D 4 HOH A 41 541 857 HOH HOH . D 4 HOH A 42 542 704 HOH HOH . D 4 HOH A 43 543 856 HOH HOH . D 4 HOH A 44 544 836 HOH HOH . D 4 HOH A 45 545 663 HOH HOH . D 4 HOH A 46 546 658 HOH HOH . D 4 HOH A 47 547 692 HOH HOH . D 4 HOH A 48 548 624 HOH HOH . D 4 HOH A 49 549 801 HOH HOH . D 4 HOH A 50 550 799 HOH HOH . D 4 HOH A 51 551 618 HOH HOH . D 4 HOH A 52 552 607 HOH HOH . D 4 HOH A 53 553 611 HOH HOH . D 4 HOH A 54 554 727 HOH HOH . D 4 HOH A 55 555 650 HOH HOH . D 4 HOH A 56 556 821 HOH HOH . D 4 HOH A 57 557 743 HOH HOH . D 4 HOH A 58 558 786 HOH HOH . D 4 HOH A 59 559 668 HOH HOH . D 4 HOH A 60 560 820 HOH HOH . D 4 HOH A 61 561 751 HOH HOH . D 4 HOH A 62 562 725 HOH HOH . D 4 HOH A 63 563 669 HOH HOH . D 4 HOH A 64 564 641 HOH HOH . D 4 HOH A 65 565 615 HOH HOH . D 4 HOH A 66 566 807 HOH HOH . D 4 HOH A 67 567 886 HOH HOH . D 4 HOH A 68 568 753 HOH HOH . D 4 HOH A 69 569 656 HOH HOH . D 4 HOH A 70 570 699 HOH HOH . D 4 HOH A 71 571 798 HOH HOH . D 4 HOH A 72 572 712 HOH HOH . D 4 HOH A 73 573 919 HOH HOH . D 4 HOH A 74 574 648 HOH HOH . D 4 HOH A 75 575 762 HOH HOH . D 4 HOH A 76 576 775 HOH HOH . D 4 HOH A 77 577 736 HOH HOH . D 4 HOH A 78 578 606 HOH HOH . D 4 HOH A 79 579 726 HOH HOH . D 4 HOH A 80 580 834 HOH HOH . D 4 HOH A 81 581 690 HOH HOH . D 4 HOH A 82 582 853 HOH HOH . D 4 HOH A 83 583 707 HOH HOH . D 4 HOH A 84 584 622 HOH HOH . D 4 HOH A 85 585 694 HOH HOH . D 4 HOH A 86 586 773 HOH HOH . D 4 HOH A 87 587 870 HOH HOH . D 4 HOH A 88 588 700 HOH HOH . D 4 HOH A 89 589 660 HOH HOH . D 4 HOH A 90 590 676 HOH HOH . D 4 HOH A 91 591 662 HOH HOH . D 4 HOH A 92 592 623 HOH HOH . D 4 HOH A 93 593 868 HOH HOH . D 4 HOH A 94 594 774 HOH HOH . D 4 HOH A 95 595 879 HOH HOH . D 4 HOH A 96 596 696 HOH HOH . D 4 HOH A 97 597 873 HOH HOH . D 4 HOH A 98 598 632 HOH HOH . D 4 HOH A 99 599 769 HOH HOH . D 4 HOH A 100 600 722 HOH HOH . D 4 HOH A 101 601 812 HOH HOH . D 4 HOH A 102 602 816 HOH HOH . D 4 HOH A 103 603 756 HOH HOH . D 4 HOH A 104 604 815 HOH HOH . D 4 HOH A 105 605 608 HOH HOH . D 4 HOH A 106 606 636 HOH HOH . D 4 HOH A 107 607 698 HOH HOH . D 4 HOH A 108 608 666 HOH HOH . D 4 HOH A 109 609 729 HOH HOH . D 4 HOH A 110 610 747 HOH HOH . D 4 HOH A 111 611 706 HOH HOH . D 4 HOH A 112 612 734 HOH HOH . D 4 HOH A 113 613 824 HOH HOH . D 4 HOH A 114 614 720 HOH HOH . D 4 HOH A 115 615 708 HOH HOH . D 4 HOH A 116 616 771 HOH HOH . D 4 HOH A 117 617 697 HOH HOH . D 4 HOH A 118 618 735 HOH HOH . D 4 HOH A 119 619 649 HOH HOH . D 4 HOH A 120 620 617 HOH HOH . D 4 HOH A 121 621 667 HOH HOH . D 4 HOH A 122 622 805 HOH HOH . D 4 HOH A 123 623 728 HOH HOH . D 4 HOH A 124 624 739 HOH HOH . D 4 HOH A 125 625 750 HOH HOH . D 4 HOH A 126 626 744 HOH HOH . D 4 HOH A 127 627 605 HOH HOH . D 4 HOH A 128 628 638 HOH HOH . D 4 HOH A 129 629 671 HOH HOH . D 4 HOH A 130 630 661 HOH HOH . D 4 HOH A 131 631 784 HOH HOH . D 4 HOH A 132 632 861 HOH HOH . D 4 HOH A 133 633 665 HOH HOH . D 4 HOH A 134 634 763 HOH HOH . D 4 HOH A 135 635 639 HOH HOH . D 4 HOH A 136 636 877 HOH HOH . D 4 HOH A 137 637 814 HOH HOH . D 4 HOH A 138 638 813 HOH HOH . D 4 HOH A 139 639 858 HOH HOH . D 4 HOH A 140 640 711 HOH HOH . D 4 HOH A 141 641 828 HOH HOH . D 4 HOH A 142 642 723 HOH HOH . D 4 HOH A 143 643 693 HOH HOH . D 4 HOH A 144 644 761 HOH HOH . D 4 HOH A 145 645 808 HOH HOH . D 4 HOH A 146 646 680 HOH HOH . D 4 HOH A 147 647 647 HOH HOH . D 4 HOH A 148 648 795 HOH HOH . D 4 HOH A 149 649 703 HOH HOH . D 4 HOH A 150 650 682 HOH HOH . D 4 HOH A 151 651 670 HOH HOH . D 4 HOH A 152 652 850 HOH HOH . D 4 HOH A 153 653 675 HOH HOH . D 4 HOH A 154 654 809 HOH HOH . D 4 HOH A 155 655 679 HOH HOH . D 4 HOH A 156 656 678 HOH HOH . D 4 HOH A 157 657 685 HOH HOH . D 4 HOH A 158 658 643 HOH HOH . D 4 HOH A 159 659 730 HOH HOH . D 4 HOH A 160 660 687 HOH HOH . D 4 HOH A 161 661 760 HOH HOH . D 4 HOH A 162 662 673 HOH HOH . D 4 HOH A 163 663 867 HOH HOH . D 4 HOH A 164 664 847 HOH HOH . D 4 HOH A 165 665 714 HOH HOH . D 4 HOH A 166 666 862 HOH HOH . D 4 HOH A 167 667 719 HOH HOH . D 4 HOH A 168 668 634 HOH HOH . D 4 HOH A 169 669 790 HOH HOH . D 4 HOH A 170 670 852 HOH HOH . D 4 HOH A 171 671 884 HOH HOH . D 4 HOH A 172 672 642 HOH HOH . D 4 HOH A 173 673 766 HOH HOH . D 4 HOH A 174 674 637 HOH HOH . D 4 HOH A 175 675 654 HOH HOH . D 4 HOH A 176 676 612 HOH HOH . D 4 HOH A 177 677 715 HOH HOH . D 4 HOH A 178 678 633 HOH HOH . D 4 HOH A 179 679 627 HOH HOH . D 4 HOH A 180 680 767 HOH HOH . D 4 HOH A 181 681 851 HOH HOH . D 4 HOH A 182 682 701 HOH HOH . D 4 HOH A 183 683 646 HOH HOH . D 4 HOH A 184 684 657 HOH HOH . D 4 HOH A 185 685 619 HOH HOH . D 4 HOH A 186 686 806 HOH HOH . D 4 HOH A 187 687 844 HOH HOH . D 4 HOH A 188 688 837 HOH HOH . D 4 HOH A 189 689 780 HOH HOH . D 4 HOH A 190 690 892 HOH HOH . D 4 HOH A 191 691 684 HOH HOH . D 4 HOH A 192 692 748 HOH HOH . D 4 HOH A 193 693 835 HOH HOH . D 4 HOH A 194 694 602 HOH HOH . D 4 HOH A 195 695 882 HOH HOH . D 4 HOH A 196 696 822 HOH HOH . D 4 HOH A 197 697 889 HOH HOH . D 4 HOH A 198 698 613 HOH HOH . D 4 HOH A 199 699 710 HOH HOH . D 4 HOH A 200 700 625 HOH HOH . D 4 HOH A 201 701 674 HOH HOH . D 4 HOH A 202 702 783 HOH HOH . D 4 HOH A 203 703 765 HOH HOH . D 4 HOH A 204 704 759 HOH HOH . D 4 HOH A 205 705 777 HOH HOH . D 4 HOH A 206 706 635 HOH HOH . D 4 HOH A 207 707 737 HOH HOH . D 4 HOH A 208 708 811 HOH HOH . D 4 HOH A 209 709 749 HOH HOH . D 4 HOH A 210 710 778 HOH HOH . D 4 HOH A 211 711 644 HOH HOH . D 4 HOH A 212 712 781 HOH HOH . D 4 HOH A 213 713 655 HOH HOH . D 4 HOH A 214 714 621 HOH HOH . D 4 HOH A 215 715 827 HOH HOH . D 4 HOH A 216 716 804 HOH HOH . D 4 HOH A 217 717 645 HOH HOH . D 4 HOH A 218 718 890 HOH HOH . D 4 HOH A 219 719 695 HOH HOH . D 4 HOH A 220 720 610 HOH HOH . D 4 HOH A 221 721 779 HOH HOH . D 4 HOH A 222 722 854 HOH HOH . D 4 HOH A 223 723 888 HOH HOH . D 4 HOH A 224 724 782 HOH HOH . D 4 HOH A 225 725 640 HOH HOH . D 4 HOH A 226 726 833 HOH HOH . D 4 HOH A 227 727 866 HOH HOH . D 4 HOH A 228 728 681 HOH HOH . D 4 HOH A 229 729 839 HOH HOH . D 4 HOH A 230 730 628 HOH HOH . D 4 HOH A 231 731 709 HOH HOH . D 4 HOH A 232 732 907 HOH HOH . D 4 HOH A 233 733 630 HOH HOH . D 4 HOH A 234 734 629 HOH HOH . D 4 HOH A 235 735 838 HOH HOH . D 4 HOH A 236 736 817 HOH HOH . D 4 HOH A 237 737 755 HOH HOH . D 4 HOH A 238 738 731 HOH HOH . D 4 HOH A 239 739 845 HOH HOH . D 4 HOH A 240 740 758 HOH HOH . D 4 HOH A 241 741 819 HOH HOH . D 4 HOH A 242 742 802 HOH HOH . D 4 HOH A 243 743 829 HOH HOH . D 4 HOH A 244 744 860 HOH HOH . D 4 HOH A 245 745 797 HOH HOH . D 4 HOH A 246 746 887 HOH HOH . D 4 HOH A 247 747 830 HOH HOH . D 4 HOH A 248 748 832 HOH HOH . D 4 HOH A 249 749 791 HOH HOH . D 4 HOH A 250 750 896 HOH HOH . D 4 HOH A 251 751 745 HOH HOH . D 4 HOH A 252 752 916 HOH HOH . D 4 HOH A 253 753 876 HOH HOH . D 4 HOH A 254 754 899 HOH HOH . D 4 HOH A 255 755 885 HOH HOH . D 4 HOH A 256 756 903 HOH HOH . D 4 HOH A 257 757 875 HOH HOH . D 4 HOH A 258 758 895 HOH HOH . D 4 HOH A 259 759 913 HOH HOH . D 4 HOH A 260 760 738 HOH HOH . D 4 HOH A 261 761 891 HOH HOH . D 4 HOH A 262 762 910 HOH HOH . D 4 HOH A 263 763 796 HOH HOH . D 4 HOH A 264 764 874 HOH HOH . D 4 HOH A 265 765 918 HOH HOH . D 4 HOH A 266 766 859 HOH HOH . D 4 HOH A 267 767 893 HOH HOH . D 4 HOH A 268 768 724 HOH HOH . D 4 HOH A 269 769 894 HOH HOH . D 4 HOH A 270 770 787 HOH HOH . D 4 HOH A 271 771 917 HOH HOH . D 4 HOH A 272 772 904 HOH HOH . D 4 HOH A 273 773 869 HOH HOH . D 4 HOH A 274 774 746 HOH HOH . D 4 HOH A 275 775 842 HOH HOH . D 4 HOH A 276 776 825 HOH HOH . D 4 HOH A 277 777 841 HOH HOH . D 4 HOH A 278 778 846 HOH HOH . D 4 HOH A 279 779 793 HOH HOH . D 4 HOH A 280 780 826 HOH HOH . D 4 HOH A 281 781 898 HOH HOH . D 4 HOH A 282 782 872 HOH HOH . D 4 HOH A 283 783 831 HOH HOH . D 4 HOH A 284 784 741 HOH HOH . D 4 HOH A 285 785 626 HOH HOH . D 4 HOH A 286 786 908 HOH HOH . D 4 HOH A 287 787 849 HOH HOH . D 4 HOH A 288 788 823 HOH HOH . D 4 HOH A 289 789 689 HOH HOH . D 4 HOH A 290 790 772 HOH HOH . D 4 HOH A 291 791 740 HOH HOH . D 4 HOH A 292 792 705 HOH HOH . D 4 HOH A 293 793 721 HOH HOH . D 4 HOH A 294 794 843 HOH HOH . D 4 HOH A 295 795 652 HOH HOH . D 4 HOH A 296 796 754 HOH HOH . D 4 HOH A 297 797 864 HOH HOH . D 4 HOH A 298 798 900 HOH HOH . D 4 HOH A 299 799 792 HOH HOH . D 4 HOH A 300 800 863 HOH HOH . D 4 HOH A 301 801 902 HOH HOH . D 4 HOH A 302 802 702 HOH HOH . D 4 HOH A 303 803 909 HOH HOH . D 4 HOH A 304 804 651 HOH HOH . D 4 HOH A 305 805 677 HOH HOH . D 4 HOH A 306 806 905 HOH HOH . D 4 HOH A 307 807 855 HOH HOH . D 4 HOH A 308 808 911 HOH HOH . D 4 HOH A 309 809 915 HOH HOH . D 4 HOH A 310 810 800 HOH HOH . D 4 HOH A 311 811 770 HOH HOH . D 4 HOH A 312 812 757 HOH HOH . D 4 HOH A 313 813 906 HOH HOH . D 4 HOH A 314 814 683 HOH HOH . D 4 HOH A 315 815 865 HOH HOH . D 4 HOH A 316 816 914 HOH HOH . D 4 HOH A 317 817 897 HOH HOH . D 4 HOH A 318 818 901 HOH HOH . D 4 HOH A 319 819 732 HOH HOH . D 4 HOH A 320 820 912 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -29.882 0.323 4.197 0 28.43 ? P PO4 401 A 1 HETATM 2 O O1 PO4 . . . B 2 -29.478 1.089 2.96 0 28.71 ? O1 PO4 401 A 1 HETATM 3 O O2 PO4 . . . B 2 -31.327 0.618 4.524 0 29.14 ? O2 PO4 401 A 1 HETATM 4 O O3 PO4 . . . B 2 -29.711 -1.157 3.952 0 28.28 ? O3 PO4 401 A 1 HETATM 5 O O4 PO4 . . . B 2 -29.017 0.747 5.359 0 28.14 ? O4 PO4 401 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 156 _model_server_stats.create_model_time_ms 107 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #